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CSPI06G35520 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G35520
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranscription factor bHLH35-like protein
Genome locationChr6:28880612..28881490
RNA-Seq ExpressionCSPI06G35520
SyntenyCSPI06G35520
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052608.1 uncharacterized protein E6C27_scaffold120G002160 [Cucumis melo var. makuwa]1.6e-8897.16Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
        MVSTLQKRFDSRNKLRLVRSLPTYESSGRQ CVFWNAVLFIHKLKLKLEAIEREYSNLL+MKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY
        VSVLEAFEKMGLNVVEARVSCTECFCMEA AVAEDHHQLLNLSDIT+AINVAIDPKLLAPNQHHND IPHNDAQLY
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY

XP_004134653.1 uncharacterized protein LOC101213083 [Cucumis sativus]1.1e-92100Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
        MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY
        VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY

XP_008439723.1 PREDICTED: uncharacterized protein LOC103484437 [Cucumis melo]4.3e-8997.73Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
        MVSTLQKRFDSRNKLRLVRSLPTYESSGRQ CVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY
        VSVLEAFEKMGLNVVEARVSCTECFCMEA AVAEDHHQLLNLSDIT+AINVAIDPKLLAPNQHHND IPHNDAQLY
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY

XP_023544520.1 uncharacterized protein LOC111804071 [Cucurbita pepo subsp. pepo]8.2e-6476Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
        MVST QKRFDSR KLRLVRSLPTY+SSG+Q   FWNAVLF+HKLKLKLEAIEREYSNLL MKREYLNS+KQ H+ KEVKVEK GEEFRVKVRCEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQL
        V+VLEAF+KMGLNV++A+VSC+ECF MEA AVAED  Q LN+SDITEAIN AI+ K LA NQ   ++ P  D ++
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQL

XP_038893157.1 uncharacterized protein LOC120082020 [Benincasa hispida]3.8e-7789.14Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
        MVSTLQKRFDSRNKLRLVRSL TYESS +QRC+FWNAVLFIHKLKLKLEAIEREYSNLL MKREYLNSIKQFHS KEVKVEKNGEEF+VKVRCEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQL
        VSVLEAFEKMGLNVVEARVSCTECFCMEA AVAE +H+LLN+SDITEAINVAID KLLA NQHH D IP NDA++
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQL

TrEMBL top hitse value%identityAlignment
A0A0A0KHW9 Uncharacterized protein5.3e-93100Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
        MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY
        VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY

A0A1S3B049 uncharacterized protein LOC1034844372.1e-8997.73Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
        MVSTLQKRFDSRNKLRLVRSLPTYESSGRQ CVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY
        VSVLEAFEKMGLNVVEARVSCTECFCMEA AVAEDHHQLLNLSDIT+AINVAIDPKLLAPNQHHND IPHNDAQLY
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY

A0A5A7UBN8 Uncharacterized protein7.9e-8997.16Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
        MVSTLQKRFDSRNKLRLVRSLPTYESSGRQ CVFWNAVLFIHKLKLKLEAIEREYSNLL+MKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY
        VSVLEAFEKMGLNVVEARVSCTECFCMEA AVAEDHHQLLNLSDIT+AINVAIDPKLLAPNQHHND IPHNDAQLY
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY

A0A6J1IR65 uncharacterized protein LOC1114786315.2e-6476Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
        MVST QKRFDSR KLRLVRSLPTY+SSG+Q   FWNAVLF+HKLKLKLEAIEREYSNLL MKREYLNS+KQ H+ KEVKVEK GEEFRVKVRCEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQL
        V+VLEAF+KMGLNV++A+VSC+ECF MEA AVAED  Q LN+ DITEAIN AID K LA NQ   ++ P  D ++
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQL

E5GC31 Uncharacterized protein2.1e-8997.73Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
        MVSTLQKRFDSRNKLRLVRSLPTYESSGRQ CVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL
Subjt:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRL

Query:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY
        VSVLEAFEKMGLNVVEARVSCTECFCMEA AVAEDHHQLLNLSDIT+AINVAIDPKLLAPNQHHND IPHNDAQLY
Subjt:  VSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29270.1 unknown protein3.3e-2340.26Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLPTYE-SSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDR
        MV++ QK+  S+ K   +++L  ++ S   Q  V   A+L+I  LKL++EA++REY +L   K+E L      H  +EVKVEK GE F+VK++  +G + 
Subjt:  MVSTLQKRFDSRNKLRLVRSLPTYE-SSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDR

Query:  LVSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAI
        LV++LEAFE+MGLNV +AR SC + F MEA    +   +L ++ D+T+ +  A+
Subjt:  LVSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAI

AT2G40435.1 BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1)3.3e-1033.12Show/hide
Query:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKG-GDR
        MVS  QKR   + K +L+RS+ T   +     +  +A  +I KLK K+E   +      D   E  +S      +  V VE   + F + V   K     
Subjt:  MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKG-GDR

Query:  LVSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAI
        LVSVLEAFE +GLNV+EAR SCT+ F + A  +  +  + ++   + +A+  AI
Subjt:  LVSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAI

AT3G56220.1 transcription regulators5.2e-0833.97Show/hide
Query:  MVSTLQKRFDS-RNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKG-GD
        MVS   KR  S R K  L+RS+ T   +  +  +  +A  +I KLK K+E I    +N    ++ +  S      +  V VE   + F +KV   K    
Subjt:  MVSTLQKRFDS-RNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKG-GD

Query:  RLVSVLEAFEKMGLNVVEARVSCTECFCMEATAVA-EDHHQLLNLSDITEAINVAI
         LV VLE FE +GL+VVEARVSCT+ F + A   +  D    ++   + +A+  AI
Subjt:  RLVSVLEAFEKMGLNVVEARVSCTECFCMEATAVA-EDHHQLLNLSDITEAINVAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTACATTACAAAAGAGATTCGACTCACGTAACAAGCTACGCCTTGTTCGATCTCTACCCACTTATGAATCCTCTGGAAGACAGAGGTGTGTGTTTTGGAATGC
TGTTCTCTTCATTCATAAGCTTAAACTCAAGCTGGAAGCAATTGAGAGAGAGTACTCAAATCTACTGGACATGAAAAGAGAATATTTGAACTCAATAAAGCAATTTCATT
CCTCCAAGGAAGTGAAGGTTGAGAAGAATGGAGAAGAGTTTAGGGTGAAAGTGAGATGCGAAAAGGGAGGGGACAGATTGGTTTCAGTATTAGAAGCGTTTGAGAAAATG
GGTCTTAATGTTGTTGAAGCTAGAGTTTCATGTACTGAATGTTTTTGTATGGAGGCCACTGCTGTAGCTGAAGATCATCATCAATTGCTTAATCTCAGTGATATAACCGA
AGCTATTAATGTAGCCATTGATCCCAAATTATTAGCTCCAAACCAGCATCATAATGACAGTATTCCTCACAATGATGCTCAACTTTATTAG
mRNA sequenceShow/hide mRNA sequence
CTTTTGTTTAATTGGGGAGCAAGAGCAAGTTCAAGCTTAGAGATTAACAGAGAAACAGAGATGGTTTCTACATTACAAAAGAGATTCGACTCACGTAACAAGCTACGCCT
TGTTCGATCTCTACCCACTTATGAATCCTCTGGAAGACAGAGGTGTGTGTTTTGGAATGCTGTTCTCTTCATTCATAAGCTTAAACTCAAGCTGGAAGCAATTGAGAGAG
AGTACTCAAATCTACTGGACATGAAAAGAGAATATTTGAACTCAATAAAGCAATTTCATTCCTCCAAGGAAGTGAAGGTTGAGAAGAATGGAGAAGAGTTTAGGGTGAAA
GTGAGATGCGAAAAGGGAGGGGACAGATTGGTTTCAGTATTAGAAGCGTTTGAGAAAATGGGTCTTAATGTTGTTGAAGCTAGAGTTTCATGTACTGAATGTTTTTGTAT
GGAGGCCACTGCTGTAGCTGAAGATCATCATCAATTGCTTAATCTCAGTGATATAACCGAAGCTATTAATGTAGCCATTGATCCCAAATTATTAGCTCCAAACCAGCATC
ATAATGACAGTATTCCTCACAATGATGCTCAACTTTATTAGTCACTTCCTAACCTATCAATTCAATGAAAATGTTTCTTCCATTCCAAATTCCAA
Protein sequenceShow/hide protein sequence
MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRLVSVLEAFEKM
GLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY