CuGenDBv2

Gene ID	CSPI06G35730
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	cyclic phosphodiesterase-like
Genome location	Chr6:28969525..28971561
RNA-Seq Expression	CSPI06G35730
Synteny	CSPI06G35730
Gene Ontology terms	GO:0009187 - cyclic nucleotide metabolic process (biological process) GO:0004113 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity (molecular function)
InterPro domains	IPR009097 - Cyclic phosphodiesterase IPR012386 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0052590.1 cyclic phosphodiesterase-like [Cucumis melo var. makuwa]

2.5e-82

83.25

Show/hide

Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M+NPESASIQS EEET+VYSVWALPPEDVSARIENLM SLRSEFGGP FEPHITVVGAIRLTAEDAL KF TACQGIKAYQATVDHV+TGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFDFKSSTP-----YMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS
        IHPTTEV+   SH        S+ P     YMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGL+FPITRLAL KTDT+DETLKSW+KIVEHDLSSS
Subjt:  IHPTTEVVETSSHFCKHFDFKSSTP-----YMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS

XP_004134643.1 cyclic phosphodiesterase [Cucumis sativus]

4.7e-105

100

Show/hide

Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS
        IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS
Subjt:  IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS

XP_008439703.1 PREDICTED: cyclic phosphodiesterase-like [Cucumis melo]

1.2e-95

91.67

Show/hide

Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M+NPESASIQS EEET+VYSVWALPPEDVSARIENLM SLRSEFGGP FEPHITVVGAIRLTAEDAL KF TACQGIKAYQATVDHV+TGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS
        IHPTTEVVETSSHFCKHF FK+STPYMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGL+FPITRLAL KTDT+DETLKSW+KIVEHDLSSS
Subjt:  IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS

XP_023543945.1 cyclic phosphodiesterase-like isoform X2 [Cucurbita pepo subsp. pepo]

6.1e-81

78.12

Show/hide

Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M NPES  IQ  E E +VYSVWALPPEDV+ARI  LM SLRSEFGGP FEPHITVVGAIRLT +DAL KFR+AC+G+KAYQATVD V+TGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS
        IHPTT+VVETSSH C HF +K+STPYMPH+SLLY++ISDE++KQAKE+A+KLDEA+NGL FPITRLAL KTDT DETLKSW+KI E DL SS
Subjt:  IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS

XP_038882567.1 cyclic phosphodiesterase-like [Benincasa hispida]

1.4e-85

82.81

Show/hide

Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M NPESASIQ  E E +VYSVWALPPEDV+ARI+NLM SLRSEFGGP FEPHITVVGAIRLT +DAL KFR+ACQG+KAYQATVDHV+TGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS
        IH TTEVVETSSH C HF +K+STPYMPHMSLLY++ISDEK+KQAK IADKLDEAVNGL+FPITRLAL KTDT DETLKSW+KI EH+L SS
Subjt:  IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLS9 Uncharacterized protein

2.3e-105

100

Show/hide

Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS
        IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS
Subjt:  IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS

A0A1S3AYZ1 cyclic phosphodiesterase-like

5.6e-96

91.67

Show/hide

Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M+NPESASIQS EEET+VYSVWALPPEDVSARIENLM SLRSEFGGP FEPHITVVGAIRLTAEDAL KF TACQGIKAYQATVDHV+TGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS
        IHPTTEVVETSSHFCKHF FK+STPYMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGL+FPITRLAL KTDT+DETLKSW+KIVEHDLSSS
Subjt:  IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS

A0A5D3CNS3 Cyclic phosphodiesterase-like

1.2e-82

83.25

Show/hide

Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M+NPESASIQS EEET+VYSVWALPPEDVSARIENLM SLRSEFGGP FEPHITVVGAIRLTAEDAL KF TACQGIKAYQATVDHV+TGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFDFKSSTP-----YMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS
        IHPTTEV+   SH        S+ P     YMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGL+FPITRLAL KTDT+DETLKSW+KIVEHDLSSS
Subjt:  IHPTTEVVETSSHFCKHFDFKSSTP-----YMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS

A0A6J1EGC1 cyclic phosphodiesterase-like

3.6e-79

77.6

Show/hide

Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M NPES  IQ  E E +VYSVWALPPEDV ARI  LM SLRSEFGGP FEPHITVVGAIRLT +DAL KFR+AC+G+KAYQATVD V+TGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS
        IHPTT+VVETSSH C HF +K +TPYMPH+SLLY++ISDE++KQAKE+A+KLDEA+NGL FPITRLAL KTDT DETLKSW+KI E DL SS
Subjt:  IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS

A0A6J1INY2 cyclic phosphodiesterase-like

3.0e-81

77.6

Show/hide

Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M NPES +IQ  E E +VYSVWALPPEDV+ARI  LM SLRSEFGGP FEPHITVVGAIRLT +DAL KFR+AC+G+KAYQATVD V+TGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS
        IHPTT+VVETSSH C HF +K+STPYMPH+SLLY++ISDE++KQAKE+A+KLDEA+NGL FP+TRLAL KTDT DETLKSW+KI E DL SS
Subjt:  IHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS

SwissProt top hits

e value

%identity

Alignment

O04147 Cyclic phosphodiesterase

2.6e-50

51.96

Show/hide

Query:  DEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETS
        +E +  VYSVWALP E+   R + LM++LRSEF GP F PH+TV  +  LTA++A   F +AC G+KAY ATVD V+TGTFF+QCVFLL+  T EV+E  
Subjt:  DEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETS

Query:  SHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLS
         H   HF+  ++TPYMPH+SLLY+ +++E++K A+E A  LD +++GL F + RLALCKTDT D+TL++W+ +   +L+
Subjt:  SHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLS

Arabidopsis top hits

e value

%identity

Alignment

AT4G18930.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein

1.9e-51

51.96

Show/hide

Query:  DEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETS
        +E +  VYSVWALP E+   R + LM++LRSEF GP F PH+TV  +  LTA++A   F +AC G+KAY ATVD V+TGTFF+QCVFLL+  T EV+E  
Subjt:  DEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETS

Query:  SHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLS
         H   HF+  ++TPYMPH+SLLY+ +++E++K A+E A  LD +++GL F + RLALCKTDT D+TL++W+ +   +L+
Subjt:  SHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLS

AT4G18940.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein

2.1e-42

44.57

Show/hide

Query:  QSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAI--RLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEV
        + DEEE  +Y++WA+P +DV  R++ LM+ LRSEFGGP F+PH+T+VG    +LTA +A   F++AC+G K Y ATVD V+ GT ++QC+++ +  T EV
Subjt:  QSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAI--RLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEV

Query:  VETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSS
        +  + HF  HF   +   Y+PHMS+LY  +++ ++K+A E A  LD +++GL F I R+AL  TD     + SW K+ EH L S
Subjt:  VETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATGAACCCAGAATCGGCATCTATCCAATCCGATGAAGAGGAAACGCACGTGTATTCTGTGTGGGCTCTTCCTCCCGAAGATGTCTCCGCCAGAATCGAGAACCTCAT
GAAAAGCCTCAGATCCGAGTTTGGCGGGCCCCTATTCGAGCCACATATCACCGTTGTTGGAGCAATCCGTCTCACCGCTGAAGACGCCCTTACCAAATTCCGCACGGCTT
GTCAGGGGATTAAGGCTTATCAAGCCACCGTCGATCATGTAACCACCGGAACCTTCTTCTACCAGTGTGTTTTTCTCCTTATTCATCCTACCACCGAGGTGGTGGAGACA
AGTTCACATTTTTGTAAACATTTTGATTTCAAAAGCTCTACCCCTTACATGCCGCATATGAGCCTACTGTATTCCCACATATCAGATGAAAAAAGGAAGCAGGCAAAAGA
AATAGCAGACAAGCTCGATGAAGCCGTGAACGGCCTGAGATTCCCCATTACTCGACTTGCACTGTGCAAAACAGACACTGCGGATGAAACTCTGAAGTCCTGGGATAAAA
TTGTAGAACACGATCTTTCTTCAAGTTAG

mRNA sequence

Show/hide mRNA sequence

CTTGAAAGTGAGAATGAAATAAGGGCATATTCCTTTAACAAACTTTGATTCCCACATCCGTATGCAGTGGACATGGCGGTGGAATAGGATCAATAAAAAAACTCTCCCCT
AGTGGGCACAAATGGCTCTTACTATATTCTCCTCCCATGTCAGACAAACTACCTTCCTTCGTTACTTTCTTTCTCAATTTCACTCCTTAACTGTGACTACATCCCTCCGC
CCAATACAATCCTCGTCAAAATCCAATTTCTTCTATTCTTCACTCCAATGATGAACCCAGAATCGGCATCTATCCAATCCGATGAAGAGGAAACGCACGTGTATTCTGTG
TGGGCTCTTCCTCCCGAAGATGTCTCCGCCAGAATCGAGAACCTCATGAAAAGCCTCAGATCCGAGTTTGGCGGGCCCCTATTCGAGCCACATATCACCGTTGTTGGAGC
AATCCGTCTCACCGCTGAAGACGCCCTTACCAAATTCCGCACGGCTTGTCAGGGGATTAAGGCTTATCAAGCCACCGTCGATCATGTAACCACCGGAACCTTCTTCTACC
AGTGTGTTTTTCTCCTTATTCATCCTACCACCGAGGTGGTGGAGACAAGTTCACATTTTTGTAAACATTTTGATTTCAAAAGCTCTACCCCTTACATGCCGCATATGAGC
CTACTGTATTCCCACATATCAGATGAAAAAAGGAAGCAGGCAAAAGAAATAGCAGACAAGCTCGATGAAGCCGTGAACGGCCTGAGATTCCCCATTACTCGACTTGCACT
GTGCAAAACAGACACTGCGGATGAAACTCTGAAGTCCTGGGATAAAATTGTAGAACACGATCTTTCTTCAAGTTAGCTTCTGTTTTTTATCCAAGCCCCTTGAAGATCTA
AGCTATGTTAGTTTACCATATTTGTTTCAACAATGTCGAAGATCTAGACAATGTTCTGTTACACAGTTTACCGTATTTGTTTCAACGATGTCTGTACTCCTCTAGACTTC
TTAACTGGAAAAAAAATAAATGTCAGCCGAAGGTCTTGTTTGGCAGCTTACAAAGCTTCGTGATTAGATTGTTTTGAACCTTTTCTGTTATTTAGAAAACAAGTTTTGAA
AGTAAACTTCATTTGAGACCAAAGAATTACAGCAG

Protein sequence

Show/hide protein sequence

MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVET
SSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS

CSPI06G35730 (gene) of Cucumber (PI 183967) v1 genome