CuGenDBv2

Gene ID	CSPI06G36650
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Nucleoporin protein Ndc1-Nup
Genome location	Chr6:29512039..29516518
RNA-Seq Expression	CSPI06G36650
Synteny	CSPI06G36650
Gene Ontology terms	GO:0006999 - nuclear pore organization (biological process) GO:0015031 - protein transport (biological process) GO:0051028 - mRNA transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0070762 - nuclear pore transmembrane ring (cellular component) GO:0030674 - protein binding, bridging (molecular function)
InterPro domains	IPR019049 - Nucleoporin protein Ndc1-Nup

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0052512.1 Ndc1_Nup domain-containing protein [Cucumis melo var. makuwa]

2.0e-302

96.93

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Query:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
        MSSSSPFFGPPEMVVKNRFLGFLIWQFIPST VFFLFKIFVSAISSVS T+SSAGTR+PSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
Subjt:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA

Query:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP
        PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYL+LFVVATAVSGSLAAVSICWGKSDGLRSAWH GLLMGLIYG FYVYKKRWVLMFPIIQRPP
Subjt:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA
        FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNV+VRKFI NQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA
Subjt:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL
        ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGA+DMTSQLSRQLLPPND HFDVKQL+ALKNFQL
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL

Query:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR
        YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTN+QSSH+LFGPAGIKWAT+SIRRVDASVGKKK+GPLHSKAYAIADVLR
Subjt:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR

Query:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
        VSIYLIVTAFHNEM+NSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
Subjt:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA

XP_004134593.1 uncharacterized protein LOC101219057 [Cucumis sativus]

0.0e+00

99.82

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Query:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
        MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
Subjt:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA

Query:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP
        PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP
Subjt:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA
        FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNV+VRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA
Subjt:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL
        ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL

Query:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR
        YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR
Subjt:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR

Query:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
        VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
Subjt:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA

XP_008439582.1 PREDICTED: uncharacterized protein LOC103484335 [Cucumis melo]

7.7e-302

96.75

Show/hide

Query:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
        MSSSSPFFGPPEMVVKNRFLGFLIWQFIPST VFFLFKIFVSAISSVS T+SSAGTR+PSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
Subjt:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA

Query:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP
        PLELVFGLVRFLVVSGGDNASSASALKDFRRRAM SFYL+LFVVATAVSGSLAAVSICWGKSDGLRSAWH GLLMGLIYG FYVYKKRWVLMFPIIQRPP
Subjt:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA
        FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNV+VRKFI NQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA
Subjt:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL
        ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGA+DMTSQLSRQLLPPNDSHFDVKQL+ALKNFQL
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL

Query:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR
        YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTN+QSSH+LFGPAGIKWAT+SIRRVDASVGKKK+GPLH KAYAIADVLR
Subjt:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR

Query:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
        VSIYLIVTAFHNEM+NSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
Subjt:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA

XP_022977407.1 uncharacterized protein LOC111477752 [Cucurbita maxima]

7.5e-273

87.88

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Query:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
        M SSS FFGPPEMVVKNRFLGFLIWQ IPST+VFFLFKIF+S ISSVSV++SS+G+ +PSAPFASLLTGFLTFLTFHLSQLLFS+SLSLLASPQLERPAA
Subjt:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA

Query:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP
        PLEL F LVRFLVVSGGDNASSASA KDF RRAMVSFYLVLFVVATAVSGSLAAVS CWGK+DGL SAWH GL MGLIYG FYVYKKRWVL FPIIQRPP
Subjt:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA
        FFSFKMGFPSAT LASKLSAA FLFSAVLM LLPD  K N +V KFI NQ ILFIGSFAVFLSWELTHHLH+VLHTKRFAFAPPKGSAAAETNPSE+LFA
Subjt:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL
        AL+DSN GSLLQYLAFLDLCMVCETNVDIWRRAAFFEE+G+TYKRV+SISLRPLEQFALNLG+GLEGA+D+TSQLS+QLLPP DSHFD+KQL+ LKNFQ+
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL

Query:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR
        YAWCAR VS LTARSHVED+FGVAQLSGSNATVMSTLLSCLLAVEVLMGKKT +QSSH+LFGPAGIKWATSSIRRVD+SVGKKK+GPLHS AYAIADVLR
Subjt:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR

Query:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
         SIYLIV+AFH+EM+NSAKSGVLEKDWIT EK PFGTRELLLQKLHIFLDF+A
Subjt:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA

XP_038882942.1 uncharacterized protein LOC120074035 [Benincasa hispida]

4.5e-286

91.71

Show/hide

Query:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
        MSSSSPFFGPPEMVVKNRFLGFLIWQ IPST+VFFLFKIFVSA+SSVS TNSS+GT +PS PFASLLTGFLTFLTFHLSQLLFS+SLSLLASPQLERPAA
Subjt:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA

Query:  PLELVFGLVRFLVVSGGDNAS--SASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQR
        PLEL FGLVRFLVVSGGDN S  SASA  DFRRRAMVSF LVLFVVATAVSGSLAAVSICWGKSDGLRSAWH GLLMGLIYG FYVYKKRWVL FPIIQR
Subjt:  PLELVFGLVRFLVVSGGDNAS--SASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQR

Query:  PPFFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHL
        PPFFSFKMGFPSATTLASKLSAATFLFSAVL++LLPDQ K+NV+VRKFI NQ ILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSE+L
Subjt:  PPFFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHL

Query:  FAALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNF
        FAALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETG+TYKRVISISLRPLEQFALNLG+GLEGA+D+TSQLS+QLLPP DSH D+KQL+ LKNF
Subjt:  FAALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNF

Query:  QLYAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADV
        QLYAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKK N+QSSH LFGPAGIKWATSSIRRVD SVGKKK+GPLHSKAYA ADV
Subjt:  QLYAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADV

Query:  LRVSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
        LR SIYLIV+AFHNEM+NSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
Subjt:  LRVSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KM37 Uncharacterized protein

0.0e+00

99.82

Show/hide

Query:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
        MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
Subjt:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA

Query:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP
        PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP
Subjt:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA
        FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNV+VRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA
Subjt:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL
        ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL

Query:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR
        YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR
Subjt:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR

Query:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
        VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
Subjt:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA

A0A1S3AZ36 uncharacterized protein LOC103484335

3.7e-302

96.75

Show/hide

Query:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
        MSSSSPFFGPPEMVVKNRFLGFLIWQFIPST VFFLFKIFVSAISSVS T+SSAGTR+PSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
Subjt:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA

Query:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP
        PLELVFGLVRFLVVSGGDNASSASALKDFRRRAM SFYL+LFVVATAVSGSLAAVSICWGKSDGLRSAWH GLLMGLIYG FYVYKKRWVLMFPIIQRPP
Subjt:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA
        FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNV+VRKFI NQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA
Subjt:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL
        ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGA+DMTSQLSRQLLPPNDSHFDVKQL+ALKNFQL
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL

Query:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR
        YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTN+QSSH+LFGPAGIKWAT+SIRRVDASVGKKK+GPLH KAYAIADVLR
Subjt:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR

Query:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
        VSIYLIVTAFHNEM+NSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
Subjt:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA

A0A5D3CN15 Ndc1_Nup domain-containing protein

9.8e-303

96.93

Show/hide

Query:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
        MSSSSPFFGPPEMVVKNRFLGFLIWQFIPST VFFLFKIFVSAISSVS T+SSAGTR+PSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
Subjt:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA

Query:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP
        PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYL+LFVVATAVSGSLAAVSICWGKSDGLRSAWH GLLMGLIYG FYVYKKRWVLMFPIIQRPP
Subjt:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA
        FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNV+VRKFI NQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA
Subjt:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL
        ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGA+DMTSQLSRQLLPPND HFDVKQL+ALKNFQL
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL

Query:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR
        YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTN+QSSH+LFGPAGIKWAT+SIRRVDASVGKKK+GPLHSKAYAIADVLR
Subjt:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR

Query:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
        VSIYLIVTAFHNEM+NSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
Subjt:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA

A0A6J1CXT0 uncharacterized protein LOC111015789

6.2e-273

87.88

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Query:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
        M SSS FF PP+MVVKNRFLGFLIWQ IPST VFFLFKIFVSAISSVS +NSS+G+R+PS PFASLL GFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
Subjt:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA

Query:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP
        PLEL FGLVRFLV++GG  ASSASA KDFRRRA VS YLVLFV+ATAVSGSLAAVSICWGKSDGLRSAW  GL MGLIYG FYVYKK WVL FPIIQRPP
Subjt:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA
        FFSFKMG PSATTLASKLSAA F+FSAVLMVLLPDQ K+NV+VRKF+ NQ I+FIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSE+LFA
Subjt:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL
        ALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEE+G+TYKRVISISL+PLEQFALNLG+GL+G+ D+TSQLS+QLLPP DSHFDVKQL+ LKNFQL
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL

Query:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR
        YAWCARTVSTLTARSH EDRFGVAQLSGSNA+VMSTLLSCLLAVEVLMGKKTN+QS H+L GPA IKWATSSIRRVDASVGKKK+GPLHSK YAIADVLR
Subjt:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR

Query:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
         SIYLIV+AFHNEM++SAKSGVLEKDWIT EKP FGTRELLLQKLHIFLDFQA
Subjt:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA

A0A6J1IIC5 uncharacterized protein LOC111477752

3.6e-273

87.88

Show/hide

Query:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA
        M SSS FFGPPEMVVKNRFLGFLIWQ IPST+VFFLFKIF+S ISSVSV++SS+G+ +PSAPFASLLTGFLTFLTFHLSQLLFS+SLSLLASPQLERPAA
Subjt:  MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAA

Query:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP
        PLEL F LVRFLVVSGGDNASSASA KDF RRAMVSFYLVLFVVATAVSGSLAAVS CWGK+DGL SAWH GL MGLIYG FYVYKKRWVL FPIIQRPP
Subjt:  PLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA
        FFSFKMGFPSAT LASKLSAA FLFSAVLM LLPD  K N +V KFI NQ ILFIGSFAVFLSWELTHHLH+VLHTKRFAFAPPKGSAAAETNPSE+LFA
Subjt:  FFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL
        AL+DSN GSLLQYLAFLDLCMVCETNVDIWRRAAFFEE+G+TYKRV+SISLRPLEQFALNLG+GLEGA+D+TSQLS+QLLPP DSHFD+KQL+ LKNFQ+
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQL

Query:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR
        YAWCAR VS LTARSHVED+FGVAQLSGSNATVMSTLLSCLLAVEVLMGKKT +QSSH+LFGPAGIKWATSSIRRVD+SVGKKK+GPLHS AYAIADVLR
Subjt:  YAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLR

Query:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
         SIYLIV+AFH+EM+NSAKSGVLEKDWIT EK PFGTRELLLQKLHIFLDF+A
Subjt:  VSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G73240.1 CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049); Has 36 Blast hits to 36 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

4.4e-146

51.93

Show/hide

Query:  PEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAAPLELVFGLVR
        PE VV +RF  FLIWQ IPS+ +FF F IF+ + +S+                   ++   TFL FH SQLLFS SL+LL+SP  + P +PL+   GL R
Subjt:  PEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAAPLELVFGLVR

Query:  FLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSD--GLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPPFFSFKMGF
         L            +  +FRRRA VS  +VLFV AT+++G  ++   C        +      GL+ GL+Y   +V K+RWVL FPIIQRPPFFSFK+G 
Subjt:  FLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSD--GLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPPFFSFKMGF

Query:  PSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFAALEDSNSG
        PSA T A KLS   ++ S ++++ L D     VSV KF+G Q + + GSF + LSWE+THH+H+VLHTKRF+FAPPKGSAAAETNPSE L AALE S  G
Subjt:  PSATTLASKLSAATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFAALEDSNSG

Query:  SLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQLYAWCARTV
        SL Q LA+LDL MV + NVD WRRAAFFEE+ +TYKRVI++ LRPLE+ A  L  GL+            L PP +S  D K  ++LK+FQLYAWCA+T 
Subjt:  SLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQLYAWCARTV

Query:  STLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLRVSIYLIVT
        ++LT+ SH EDR GVAQLSG NA V+STLLS LLA+E  MGKKTNLQS   L GPA IKWATSS+ R D    K+  G +++ AYA  DVLR+S+Y I++
Subjt:  STLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLRVSIYLIVT

Query:  AFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
         F +EM+NS ++G+L +DWI  +KPPFGT ++LLQKL +FL+FQA
Subjt:  AFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTCATCTTCTCCGTTTTTCGGACCCCCAGAAATGGTTGTCAAGAATCGCTTTCTGGGTTTCCTTATTTGGCAATTTATTCCTTCAACAGTCGTGTTTTTCCTCTT
CAAAATCTTCGTTTCAGCCATTTCTTCTGTTTCTGTTACCAATTCCTCAGCTGGAACTAGGGACCCATCTGCCCCTTTTGCTTCATTGCTCACTGGGTTCCTTACCTTTC
TTACATTTCATCTTTCTCAGCTCCTTTTTTCTTCTTCCCTTTCTCTTCTTGCTTCTCCCCAGCTCGAGAGACCTGCCGCGCCGCTTGAGCTCGTGTTTGGGCTCGTCCGG
TTTCTTGTAGTTTCAGGTGGTGATAATGCTTCATCAGCGTCGGCTTTGAAGGATTTTCGCCGTCGAGCTATGGTTTCGTTCTATTTGGTTTTGTTTGTTGTGGCAACTGC
GGTTTCAGGTTCCTTGGCGGCGGTTTCCATATGTTGGGGGAAATCAGATGGTCTTAGAAGTGCGTGGCATATGGGTCTCTTGATGGGTTTGATTTATGGCTGTTTCTATG
TTTACAAGAAAAGATGGGTTCTAATGTTCCCAATCATACAGCGTCCCCCCTTTTTCAGTTTCAAGATGGGTTTTCCATCAGCTACAACGTTGGCTTCCAAACTTTCTGCT
GCAACCTTCCTATTTTCAGCAGTATTAATGGTGCTTCTGCCTGATCAACATAAGAAAAATGTTTCGGTCAGAAAATTCATTGGTAACCAGACCATTCTATTCATTGGAAG
TTTTGCAGTTTTTCTTTCTTGGGAATTGACTCACCACTTACATCGGGTCCTACACACCAAGAGGTTTGCTTTTGCACCTCCAAAGGGTTCTGCAGCTGCGGAAACAAATC
CTAGTGAGCACCTCTTTGCAGCTTTGGAGGACAGCAACTCTGGATCACTTTTGCAATATCTTGCATTTCTTGATCTCTGCATGGTTTGTGAGACTAATGTTGATATATGG
AGGAGAGCTGCATTTTTCGAAGAAACAGGGGACACATACAAGCGAGTTATATCCATATCCTTGAGGCCTCTGGAGCAATTTGCCCTGAACTTGGGTCAAGGTTTGGAAGG
TGCTATGGACATGACCTCCCAACTATCCAGACAGTTATTACCGCCAAATGACTCTCACTTCGATGTAAAACAATTGAAAGCTCTTAAAAACTTTCAGTTGTACGCATGGT
GTGCCCGTACGGTTTCTACATTGACTGCACGCTCACATGTGGAAGATCGATTCGGAGTTGCCCAGCTCTCTGGGAGTAATGCTACTGTTATGTCAACACTATTGTCTTGC
CTGCTTGCTGTTGAAGTGCTGATGGGGAAGAAGACTAATCTACAATCTTCACACAATCTATTCGGTCCAGCTGGTATTAAATGGGCAACATCGAGTATTAGAAGAGTAGA
TGCTTCAGTTGGTAAAAAGAAAAACGGGCCGCTGCACTCGAAGGCATATGCAATTGCAGACGTATTGAGGGTTTCGATTTACCTCATTGTTACCGCATTCCATAATGAGA
TGGTGAACAGTGCCAAGTCTGGTGTTCTTGAGAAAGATTGGATCACGGATGAAAAACCCCCTTTTGGTACTCGCGAGTTGCTTCTGCAGAAACTGCATATTTTCTTGGAT
TTTCAAGCTTAG

mRNA sequence

Show/hide mRNA sequence

CCCTAAAAGGAGCTTTGTAGTTGCAGTCGAGGCTTGTGCGCTTCAAACAAATTGAATTGGGAGATGGAAATTTGAATTGAGTCCCCTTTGAAGAAGAATCCCACCACTTA
ATCCGCTTCTGAAATTTCTTACAATCAAACCCAGTTGATTATTTTCAATTCTCAAGAACAAAGATCGCTGTGGGCTTCGATTTTGATTTTGTAAGGAAAAACCCACTTGA
AAATGTCTTCATCTTCTCCGTTTTTCGGACCCCCAGAAATGGTTGTCAAGAATCGCTTTCTGGGTTTCCTTATTTGGCAATTTATTCCTTCAACAGTCGTGTTTTTCCTC
TTCAAAATCTTCGTTTCAGCCATTTCTTCTGTTTCTGTTACCAATTCCTCAGCTGGAACTAGGGACCCATCTGCCCCTTTTGCTTCATTGCTCACTGGGTTCCTTACCTT
TCTTACATTTCATCTTTCTCAGCTCCTTTTTTCTTCTTCCCTTTCTCTTCTTGCTTCTCCCCAGCTCGAGAGACCTGCCGCGCCGCTTGAGCTCGTGTTTGGGCTCGTCC
GGTTTCTTGTAGTTTCAGGTGGTGATAATGCTTCATCAGCGTCGGCTTTGAAGGATTTTCGCCGTCGAGCTATGGTTTCGTTCTATTTGGTTTTGTTTGTTGTGGCAACT
GCGGTTTCAGGTTCCTTGGCGGCGGTTTCCATATGTTGGGGGAAATCAGATGGTCTTAGAAGTGCGTGGCATATGGGTCTCTTGATGGGTTTGATTTATGGCTGTTTCTA
TGTTTACAAGAAAAGATGGGTTCTAATGTTCCCAATCATACAGCGTCCCCCCTTTTTCAGTTTCAAGATGGGTTTTCCATCAGCTACAACGTTGGCTTCCAAACTTTCTG
CTGCAACCTTCCTATTTTCAGCAGTATTAATGGTGCTTCTGCCTGATCAACATAAGAAAAATGTTTCGGTCAGAAAATTCATTGGTAACCAGACCATTCTATTCATTGGA
AGTTTTGCAGTTTTTCTTTCTTGGGAATTGACTCACCACTTACATCGGGTCCTACACACCAAGAGGTTTGCTTTTGCACCTCCAAAGGGTTCTGCAGCTGCGGAAACAAA
TCCTAGTGAGCACCTCTTTGCAGCTTTGGAGGACAGCAACTCTGGATCACTTTTGCAATATCTTGCATTTCTTGATCTCTGCATGGTTTGTGAGACTAATGTTGATATAT
GGAGGAGAGCTGCATTTTTCGAAGAAACAGGGGACACATACAAGCGAGTTATATCCATATCCTTGAGGCCTCTGGAGCAATTTGCCCTGAACTTGGGTCAAGGTTTGGAA
GGTGCTATGGACATGACCTCCCAACTATCCAGACAGTTATTACCGCCAAATGACTCTCACTTCGATGTAAAACAATTGAAAGCTCTTAAAAACTTTCAGTTGTACGCATG
GTGTGCCCGTACGGTTTCTACATTGACTGCACGCTCACATGTGGAAGATCGATTCGGAGTTGCCCAGCTCTCTGGGAGTAATGCTACTGTTATGTCAACACTATTGTCTT
GCCTGCTTGCTGTTGAAGTGCTGATGGGGAAGAAGACTAATCTACAATCTTCACACAATCTATTCGGTCCAGCTGGTATTAAATGGGCAACATCGAGTATTAGAAGAGTA
GATGCTTCAGTTGGTAAAAAGAAAAACGGGCCGCTGCACTCGAAGGCATATGCAATTGCAGACGTATTGAGGGTTTCGATTTACCTCATTGTTACCGCATTCCATAATGA
GATGGTGAACAGTGCCAAGTCTGGTGTTCTTGAGAAAGATTGGATCACGGATGAAAAACCCCCTTTTGGTACTCGCGAGTTGCTTCTGCAGAAACTGCATATTTTCTTGG
ATTTTCAAGCTTAGATATAACCGGGTTTCGACCTGTTTAGTGAATTATACCTAGCCACCTGTTAGGCAGTTTTGTCCTTTCTAAAGAGTTATGAATATGAAGATGATGTT
AAGACTGATGGAAATTCACAAACTAAGTTTGCAAGTTTGTAATACGCTTTACATCTCTTGTCTCCGCTTCTTCACTCCAAAATTGAGAAATTATCGCGGCC

Protein sequence

Show/hide protein sequence

MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAAPLELVFGLVR
FLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPPFFSFKMGFPSATTLASKLSA
ATFLFSAVLMVLLPDQHKKNVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFAALEDSNSGSLLQYLAFLDLCMVCETNVDIW
RRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQLYAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSC
LLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLRVSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLD
FQA

CSPI06G36650 (gene) of Cucumber (PI 183967) v1 genome