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CSPI06G37530 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G37530
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptioncytochrome c6, chloroplastic
Genome locationChr6:30126730..30129698
RNA-Seq ExpressionCSPI06G37530
SyntenyCSPI06G37530
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0005506 - iron ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR009056 - Cytochrome c-like domain
IPR023655 - Cytochrome c6
IPR036909 - Cytochrome c-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134523.1 cytochrome c6, chloroplastic [Cucumis sativus]1.1e-9298.24Show/hide
Query:  MKEMHLLSVTSHFVAPNTSAYCFPGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGAT
        MKEMHLLSVTSHFVAPNTS YCFPGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKT GCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGAT
Subjt:  MKEMHLLSVTSHFVAPNTSAYCFPGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGAT

Query:  LFSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        LFSSDLERNGADAEEEIYRITY+GKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
Subjt:  LFSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

XP_008439440.1 PREDICTED: cytochrome c6, chloroplastic [Cucumis melo]1.3e-7988.76Show/hide
Query:  MHLLSVTSHFVAPNTSAYCFP--GKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATL
        M LLSVTS FV P +S + FP  G RRT VCQIRT VKIL+ L PPLIALLLPLSPLNKTPGCLVLAET EIERGGALFNQ+CIGCHDGGGNIIQPGATL
Subjt:  MHLLSVTSHFVAPNTSAYCFP--GKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATL

Query:  FSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        FSSDLERNGADAEEEIYRITY GKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
Subjt:  FSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

XP_022926876.1 cytochrome c6, chloroplastic [Cucurbita moschata]3.3e-7079.29Show/hide
Query:  MHLLSVTSHFVAPNTSAYCFPGK--RRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATL
        M  LSVTS F   + S +CFP K  RRT VCQ+R QVKILK L PPLIA+L+ L PLNKTPGC  LA++ EIERGGALF+ +CIGCHD GGNIIQPGATL
Subjt:  MHLLSVTSHFVAPNTSAYCFPGK--RRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATL

Query:  FSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        FSSDLERNGAD+EEEIY+ITY GKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  FSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

XP_023517564.1 cytochrome c6, chloroplastic [Cucurbita pepo subsp. pepo]1.6e-6978.7Show/hide
Query:  MHLLSVTSHFVAPNTSAYCFPGK--RRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATL
        M  LSVTS F   + S +CFP K  RRT VCQ+R QV ILK L PPLIA+L+ L PLNKTPGC  LA++ EIERGGALF+ +CIGCHD GGNIIQPGATL
Subjt:  MHLLSVTSHFVAPNTSAYCFPGK--RRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATL

Query:  FSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        FSSDLERNGAD+EEEIY+ITY GKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  FSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

XP_038877732.1 cytochrome c6, chloroplastic [Benincasa hispida]2.0e-7584.02Show/hide
Query:  MHLLSVTSHFVAPNTSAYCFP--GKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATL
        MHLLS TS+F     + +CFP   KRRT VCQIRTQVKIL +L PPLIA+ L LSPLN+TPGCL LA+T EIERGGALFNQ+CIGCHDGGGNIIQPGATL
Subjt:  MHLLSVTSHFVAPNTSAYCFP--GKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATL

Query:  FSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        FSSDLERNGADAEEEIYRITY GKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVK+QADRGWPNP
Subjt:  FSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

TrEMBL top hitse value%identityAlignment
A0A0A0KPD1 Cytochrome c domain-containing protein6.5e-8089.41Show/hide
Query:  MKEMHLLSVTSHFVAPNTSAYCFPGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGAT
        MKEMHLLS                GKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKT GCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGAT
Subjt:  MKEMHLLSVTSHFVAPNTSAYCFPGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGAT

Query:  LFSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        LFSSDLERNGADAEEEIYRITY+GKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
Subjt:  LFSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

A0A1S3AYD3 cytochrome c6, chloroplastic6.5e-8088.76Show/hide
Query:  MHLLSVTSHFVAPNTSAYCFP--GKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATL
        M LLSVTS FV P +S + FP  G RRT VCQIRT VKIL+ L PPLIALLLPLSPLNKTPGCLVLAET EIERGGALFNQ+CIGCHDGGGNIIQPGATL
Subjt:  MHLLSVTSHFVAPNTSAYCFP--GKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATL

Query:  FSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        FSSDLERNGADAEEEIYRITY GKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
Subjt:  FSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

A0A6J1CXZ2 cytochrome c6, chloroplastic4.1e-6676.47Show/hide
Query:  MHLLSVTSHFVAPNTSAYCF--PGKRRTPVCQIR-TQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGAT
        MHLLS  S F   + +++CF   G+R T VCQ R  Q+KI K+  PPLIA+L+ LSP+ KTPGC  LA+T+EIERGGALF+QSCIGCHDGGGNIIQPGAT
Subjt:  MHLLSVTSHFVAPNTSAYCF--PGKRRTPVCQIR-TQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGAT

Query:  LFSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        LFSSDLERNGAD EEEIY ITY GKGRMPGFGENCKPRGQCTFGPRLQE+EIRLLAKFVKIQADRGW NP
Subjt:  LFSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

A0A6J1EG38 cytochrome c6, chloroplastic1.6e-7079.29Show/hide
Query:  MHLLSVTSHFVAPNTSAYCFPGK--RRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATL
        M  LSVTS F   + S +CFP K  RRT VCQ+R QVKILK L PPLIA+L+ L PLNKTPGC  LA++ EIERGGALF+ +CIGCHD GGNIIQPGATL
Subjt:  MHLLSVTSHFVAPNTSAYCFPGK--RRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATL

Query:  FSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        FSSDLERNGAD+EEEIY+ITY GKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  FSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

A0A6J1KPJ4 cytochrome c6, chloroplastic1.4e-6978.7Show/hide
Query:  MHLLSVTSHFVAPNTSAYCFPGK--RRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATL
        M LLSV S F   + S +CF  K  RRT VC++R QVK LKAL PPLIA+L+ L PLNKTPGC  LA++ EIERGGALF+ +CIGCHDGGGNIIQPGATL
Subjt:  MHLLSVTSHFVAPNTSAYCFPGK--RRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATL

Query:  FSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        FSSDLERNGAD+EEEIY+ITY GKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  FSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

SwissProt top hitse value%identityAlignment
P00110 Cytochrome c64.7e-1138.14Show/hide
Query:  EIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEI-YRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGW
        +IE G  +F  +C  CH GG N+I P  TL    LE NG +A   I Y++T NGK  MP             FG RL + +I  +A +V  Q+++GW
Subjt:  EIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEI-YRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGW

P07497 Cytochrome c62.8e-1130.23Show/hide
Query:  KILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPR
        +IL   +  L+ LL  ++P          A+  ++  GG +F+ +C  CH GG N++ P  TL  +DL++ G  + E I     NGKG MP FG      
Subjt:  KILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPR

Query:  GQCTFGPRLQEEEIRLLAKFVKIQADRGW
               +L  ++I  +A +V  Q+++GW
Subjt:  GQCTFGPRLQEEEIRLLAKFVKIQADRGW

P25935 Cytochrome c62.8e-1130.23Show/hide
Query:  KILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPR
        +IL   +  L+ LL  ++P          A+  ++  GG +F+ +C  CH GG N++ P  TL  +DL++ G  + E I     NGKG MP FG      
Subjt:  KILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPR

Query:  GQCTFGPRLQEEEIRLLAKFVKIQADRGW
               +L  ++I  +A +V  Q+++GW
Subjt:  GQCTFGPRLQEEEIRLLAKFVKIQADRGW

P46445 Cytochrome c65.2e-1035.42Show/hide
Query:  EIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGW
        ++  G A+F  +C  CH+GG N I P  TL  +DLE NG ++   I     NG G MPGF      +G      R+ + ++  +A +V  QA++GW
Subjt:  EIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGW

Q93VA3 Cytochrome c6, chloroplastic1.2e-4970.54Show/hide
Query:  ILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRG
        +LK L PPL A+LL +SP+   P    L +T++I+RG  LFN++CIGCHD GGNIIQPGATLF+ DLERNG D EEEIYR+TY GKGRMPGFGE C PRG
Subjt:  ILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRG

Query:  QCTFGPRLQEEEIRLLAKFVKIQADRGWP
        QCTFGPRLQ+EEI+LLA+FVK QAD+GWP
Subjt:  QCTFGPRLQEEEIRLLAKFVKIQADRGWP

Arabidopsis top hitse value%identityAlignment
AT5G45040.1 Cytochrome c8.2e-5170.54Show/hide
Query:  ILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRG
        +LK L PPL A+LL +SP+   P    L +T++I+RG  LFN++CIGCHD GGNIIQPGATLF+ DLERNG D EEEIYR+TY GKGRMPGFGE C PRG
Subjt:  ILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYNGKGRMPGFGENCKPRG

Query:  QCTFGPRLQEEEIRLLAKFVKIQADRGWP
        QCTFGPRLQ+EEI+LLA+FVK QAD+GWP
Subjt:  QCTFGPRLQEEEIRLLAKFVKIQADRGWP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAGATGCACCTTCTCTCCGTAACTTCACATTTTGTTGCCCCTAACACTAGCGCTTATTGCTTCCCAGGAAAGCGACGGACCCCAGTTTGTCAAATTCGTACACA
AGTTAAGATTCTTAAGGCCTTGGTTCCCCCTCTGATTGCGCTGCTTCTACCATTATCTCCCCTCAACAAAACCCCAGGATGTCTTGTGCTCGCCGAAACGATAGAAATAG
AAAGAGGAGGTGCATTGTTTAATCAATCTTGCATTGGCTGCCATGACGGAGGGGGAAACATAATTCAGCCCGGTGCCACACTCTTTTCAAGTGATCTTGAAAGAAATGGA
GCTGATGCCGAAGAGGAGATCTACCGTATAACATATAATGGGAAAGGGAGAATGCCTGGTTTTGGTGAGAACTGTAAACCAAGGGGTCAGTGCACATTTGGTCCACGTTT
GCAGGAGGAAGAAATTAGGCTTTTGGCGAAGTTTGTAAAGATACAGGCAGATCGGGGGTGGCCAAACCCATAG
mRNA sequenceShow/hide mRNA sequence
GCCCGCTAAATTTCCCTTTTCTTTTTTTAATTTGAAAAGTATTTAGTAAAAATTGGTCACATTATAAAACAAAATAAAAATAAAAAGGATTAAGGGAGGCAGTAGACACA
TCCAACAAATCACCCGCCAAATCCCAGAAGCAACGACGAGAGCACCGGCATCGCAGCCTCACAGATGAAGGAGATGCACCTTCTCTCCGTAACTTCACATTTTGTTGCCC
CTAACACTAGCGCTTATTGCTTCCCAGGAAAGCGACGGACCCCAGTTTGTCAAATTCGTACACAAGTTAAGATTCTTAAGGCCTTGGTTCCCCCTCTGATTGCGCTGCTT
CTACCATTATCTCCCCTCAACAAAACCCCAGGATGTCTTGTGCTCGCCGAAACGATAGAAATAGAAAGAGGAGGTGCATTGTTTAATCAATCTTGCATTGGCTGCCATGA
CGGAGGGGGAAACATAATTCAGCCCGGTGCCACACTCTTTTCAAGTGATCTTGAAAGAAATGGAGCTGATGCCGAAGAGGAGATCTACCGTATAACATATAATGGGAAAG
GGAGAATGCCTGGTTTTGGTGAGAACTGTAAACCAAGGGGTCAGTGCACATTTGGTCCACGTTTGCAGGAGGAAGAAATTAGGCTTTTGGCGAAGTTTGTAAAGATACAG
GCAGATCGGGGGTGGCCAAACCCATAGACGGATATTGATTTTTGGGCCAGACCATTATTTGCCTTGTTTACCAAATACTAATGTATGCTTTGTGTATGAAATTGAAGTCT
TACCAGTTAATATTTGCCAAGTTCTTATCCGAATTGATGGCCTCACATATGTAGATGGCACATCTCTAGCTAATATGACAACTGAAAAGATAGGATGGATTGTAGCTGTT
ATCCTTTTGATAACTAACAGCGACATTCAAACAATGTATTCATGTATCTCTTTAGAAGCGAGCAGTATCCATACTTCCCTACTGGACATGAATTGATCATAAGACAAGGG
TCAACAATCAACTTAATCCCAAATGCAAATGAAGTACATGAATATACATGTATATGCCAATTTGAAGAGTAAAAACTATATTGTGAG
Protein sequenceShow/hide protein sequence
MKEMHLLSVTSHFVAPNTSAYCFPGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTPGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNG
ADAEEEIYRITYNGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP