CuGenDBv2

Gene ID	CSPI07G00060
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Reverse transcriptase
Genome location	Chr7:123874..124869
RNA-Seq Expression	CSPI07G00060
Synteny	CSPI07G00060
Gene Ontology terms	GO:0006259 - DNA metabolic process (biological process) GO:0006885 - regulation of pH (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0012505 - endomembrane system (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0004518 - nuclease activity (molecular function) GO:0008233 - peptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0015299 - solute:proton antiporter activity (molecular function) GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR005162 - Retrotransposon gag domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_031739508.1 uncharacterized protein LOC116403159 [Cucumis sativus]

4.1e-165

89.97

Show/hide

Query:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET
        ME+RF ELM AIAQNQQAPAVPPA      PVVPPVPAAPPAPA PPAQGLAAQQPQ LPNQLSA+ KHLRDFRKYDPQTF+GSLEDPTKAELWLSSVET
Subjt:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET

Query:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ
        IFNYMRCPEEHRVQCAAFLLRD GIIWWRTTM MLGGDVRQITWDQFKDCFYTKFFS NLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ
Subjt:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ

Query:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT
        ARA+RFVKGL DEIRGFVRALKPTTQ E LRL VDMSIG+DEI+ARS DKG+SSGQKRKAEQR VG+PQRNLR GDP  +FQQSSGGAGDTTREKPLCNT
Subjt:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT

Query:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC
        CGK HLGRCLMGTRVCYKCKQEGHMADRC
Subjt:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC

XP_031741726.1 uncharacterized protein LOC116403920 [Cucumis sativus]

5.3e-165

89.97

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Query:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET
        ME+RF ELM AIA+NQQAPAVPPA      PVVPPVPAAPPAPA PPAQGLAAQQPQILPNQLSA+ KHLRDFRKYDPQTF+GSLEDPTKAELWLSSVET
Subjt:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET

Query:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ
        IFNYMRCPEEHRVQCAAFLLRD GIIWWRTTM MLGGDVRQITWDQFK+CFYTKFFS NLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ
Subjt:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ

Query:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT
        ARA+RFVKGL DEIR FVRALKPTTQ E LRL VDMSIG+DEI+ RS DKG+SSGQKRKAEQR VGVPQRNLR GDP R+FQQSSGGAGDTTREKPLCNT
Subjt:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT

Query:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC
        CGKRHLGRCLMGTRVCYKCKQEGHMADRC
Subjt:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC

XP_031742890.1 uncharacterized protein LOC116404512 [Cucumis sativus]

5.3e-165

89.97

Show/hide

Query:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET
        ME+RF ELM AIA+NQQAPAVPPA      PVVPPVPAAPPAPA PPAQGLAAQQPQILPNQLSA+ KHLRDFRKYDPQTF+GSLEDPTKAELWLSSVET
Subjt:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET

Query:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ
        IFNYMRCPEEHRVQCAAFLLRD GIIWWRTTM MLGGDVRQITWDQFK+CFYTKFFS NLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ
Subjt:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ

Query:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT
        ARA+RFVKGL DEIR FVRALKPTTQ E LRL VDMSIG+DEI+ RS DKG+SSGQKRKAEQR VGVPQRNLR GDP R+FQQSSGGAGDTTREKPLCNT
Subjt:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT

Query:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC
        CGKRHLGRCLMGTRVCYKCKQEGHMADRC
Subjt:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC

XP_031743557.1 uncharacterized protein LOC116404620 isoform X1 [Cucumis sativus]

2.8e-166

89.97

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Query:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET
        ME+RF ELM AIAQNQQAPAVPPA      PV+PPVPAAPPAP TPPAQGLAAQQPQILPNQLSA+ KHLRDFRKYDPQTF+GSLEDPTKAELWLSSVET
Subjt:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET

Query:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ
        IFNYMRCPEEHRVQCAAFLLRD GIIWWRTTM ML GDVRQ+TWDQFKDCFYTKFFS NLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRF PELVGNEQ
Subjt:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ

Query:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT
        ARA+RF+KGL DEIRGFVRALKPTTQ E LRL VDMSIG+DEI+ARS DKG+SSGQKRKAEQR VGVPQRNLRSGDP R+FQQSSGGAGDTTREKPLCNT
Subjt:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT

Query:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC
        CGKRHLGRCLMGTRVCYKCKQEGHMADRC
Subjt:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC

XP_031743561.1 uncharacterized protein LOC116404620 isoform X2 [Cucumis sativus]

2.8e-166

89.97

Show/hide

Query:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET
        ME+RF ELM AIAQNQQAPAVPPA      PV+PPVPAAPPAP TPPAQGLAAQQPQILPNQLSA+ KHLRDFRKYDPQTF+GSLEDPTKAELWLSSVET
Subjt:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET

Query:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ
        IFNYMRCPEEHRVQCAAFLLRD GIIWWRTTM ML GDVRQ+TWDQFKDCFYTKFFS NLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRF PELVGNEQ
Subjt:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ

Query:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT
        ARA+RF+KGL DEIRGFVRALKPTTQ E LRL VDMSIG+DEI+ARS DKG+SSGQKRKAEQR VGVPQRNLRSGDP R+FQQSSGGAGDTTREKPLCNT
Subjt:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT

Query:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC
        CGKRHLGRCLMGTRVCYKCKQEGHMADRC
Subjt:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SQU8 Reverse transcriptase

2.7e-106

59.27

Show/hide

Query:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET
        ME+RF +L+M + + QQ          PP+P   P PA  PAPA+ P        PQ++P+QLSA+ KHLRDFRKY+P TF+GSLEDPT+A+LWLSS+ET
Subjt:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET

Query:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ
        IF YM+CPE+ +VQCA F+L D G  WW TT  MLGGDV QITW QFK+ FY KFFS +LRDAK QEFL L+QG MTVE+YD EFDMLSRFAPE++  E 
Subjt:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ

Query:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT
        ARA++FV+GL  +I+G VRA +P T  + LRL VD+S+ +    ++++ +G++SGQKRKAEQ+ V VPQRN RSG   R FQQ    AG+  R KPLC T
Subjt:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT

Query:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC
        CGK HLGRCL GTR C+KC+QEGH ADRC
Subjt:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC

A0A5A7SSS7 Gag protease polyprotein

8.4e-108

61.7

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Query:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET
        ME+RF +L+M + + QQ PA PPAP   P+P   P P   PAPA  PA  L A  PQ++P+QLSA+ KHLRDFRKY+P TF+GSLEDPT+A+LWLSS+ET
Subjt:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET

Query:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ
        IF YM+CPE+ +VQCA F+L D G  WW TT  MLGGDV QI W QFK+ FY KFFS +LRDAK QEFL L+QG MTVE+Y+ EFDMLSRFAPE++  E 
Subjt:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ

Query:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT
        ARA++FV+GL  +I+G VRA +P T  + LRL VD+S+ +    +++  +G++SGQKRKAEQ+ V VPQRN RSG   R FQQ    AGDTTR KPLC T
Subjt:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT

Query:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC
        CGK HLGRCL GTR C+KC+QEGH ADRC
Subjt:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC

A0A5A7T9Z4 Gag protease polyprotein

3.5e-106

58.66

Show/hide

Query:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET
        ME+RF +L+M + + Q+  +  PAP   P+P   PVPA  P P            PQ +P+QLSA+ KHLRDFRKY+P TF+GSLEDPT+A++WLSS+ET
Subjt:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET

Query:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ
        IF YM+CPE+ +VQCA F+L D G  WW TT  MLGGDV QITW QFK+ FY KFFS +LRDAK QEFL L+QG MTVE+YD EFDMLSRFAPE++  E 
Subjt:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ

Query:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT
        ARA++FV+GL  +I+G VRA +P T  + LRL VD+++ +    ++++ +G +SGQKRKAEQ+ V VPQRN RSG   R FQQ    AG+  REKPLC T
Subjt:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT

Query:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC
        CGK HLGRCL GTR C+KC+QEGH ADRC
Subjt:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC

A0A5A7UDB1 Reverse transcriptase

1.0e-105

59.57

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Query:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET
        ME+RF +L+M + + Q+    P +P   P+P   PVPA  PAPA  P        PQ++P+QLSA+ KHLRDFRKY+P TF+GSLEDPT+A+LWLSS+ET
Subjt:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET

Query:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ
        IF YM+CPE+ +VQCA F+L D G  WW TT  MLGGDV QITW QFK+ FY KFFS +LRDAK QEFL L+QG MTVE+YD EFDMLSRFAPE++  E 
Subjt:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ

Query:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT
        ARA++FV+GL  +I+G VRA +P T  + LRL VD+S+ +    ++++ +G++SGQKRKAEQ+ V VPQRN RSG   R FQQ    AG+  R KPLC T
Subjt:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT

Query:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC
        CGK HLGRCL GTR C+KC+QEGH ADRC
Subjt:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC

A0A5A7V8X5 Pol protein

1.0e-105

59.88

Show/hide

Query:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET
        ME+RF +L+M + + QQ     PA   PP+P   P PA  PAPA  PAQ   A  PQ++P+QLSA+ KHLRDFRKY+P TF+GSLEDPT+A+LWLSS+ET
Subjt:  MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVET

Query:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ
        IF YM+CPE+ +VQCA F+L D G  WW TT  MLGGDV QITW QFK+ FY KFFS +LRDAK QEFL L+Q  MTVE+YD EFDMLSRFAPE++  E 
Subjt:  IFNYMRCPEEHRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQ

Query:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT
        ARA++FV+GL  +I+G VRA +P T  + LRL VD+S+ +    ++++ +G++SG+KRKAEQ+ V  PQRN RSG   R FQQ    AG+  R KPLC T
Subjt:  ARAERFVKGLTDEIRGFVRALKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNT

Query:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC
        CGK HLGRCL GTR C+KC+QEGH ADRC
Subjt:  CGKRHLGRCLMGTRVCYKCKQEGHMADRC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGAGAGGTTCGCGGAGCTTATGATGGCTATAGCTCAGAACCAGCAGGCACCTGCAGTTCCACCTGCACCAGTTGTTCCGCCTTCACCTGTGGTTCCCCCTGTACC
AGCAGCTCCACCTGCACCAGCAACCCCTCCTGCACAAGGATTGGCTGCACAACAGCCACAGATACTACCGAACCAGCTTTCTGCTAAGGTGAAACATTTGAGAGACTTTA
GGAAATATGACCCTCAGACGTTTGAAGGGTCACTGGAGGATCCTACTAAAGCTGAGTTGTGGTTGTCCTCTGTGGAAACCATATTTAATTACATGAGATGTCCAGAGGAG
CATAGGGTTCAGTGTGCTGCTTTTCTTCTGAGGGACATAGGTATTATTTGGTGGAGGACTACGATGCATATGTTAGGTGGAGATGTGAGACAGATCACTTGGGATCAGTT
TAAAGACTGCTTCTATACCAAGTTTTTCTCGACTAACCTTAGAGACGCCAAAAGCCAGGAATTCTTGGAATTGAAGCAAGGACACATGACAGTTGAGGAGTATGACCAGG
AGTTTGATATGCTGTCGCGCTTTGCCCCTGAACTTGTTGGTAATGAGCAGGCTAGAGCTGAGAGGTTTGTCAAAGGATTGACAGATGAGATTAGAGGCTTTGTGCGTGCA
CTAAAGCCCACTACCCAGGGTGAAGTGCTGCGTCTGACAGTGGATATGAGTATTGGGCAGGATGAAATTCAGGCAAGGAGTTCTGATAAGGGAACGTCGTCTGGTCAGAA
GAGGAAAGCAGAGCAGAGAATTGTGGGAGTTCCTCAGAGGAACTTGAGATCAGGCGATCCTATTCGCAATTTCCAGCAGAGTTCTGGTGGGGCAGGAGACACTACTAGAG
AGAAGCCACTATGCAATACGTGTGGGAAACGCCACCTGGGTCGTTGTTTGATGGGAACGAGAGTCTGTTATAAGTGCAAGCAAGAGGGCCACATGGCTGATCGATGTCAT
CACTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEERFAELMMAIAQNQQAPAVPPAPVVPPSPVVPPVPAAPPAPATPPAQGLAAQQPQILPNQLSAKVKHLRDFRKYDPQTFEGSLEDPTKAELWLSSVETIFNYMRCPEE
HRVQCAAFLLRDIGIIWWRTTMHMLGGDVRQITWDQFKDCFYTKFFSTNLRDAKSQEFLELKQGHMTVEEYDQEFDMLSRFAPELVGNEQARAERFVKGLTDEIRGFVRA
LKPTTQGEVLRLTVDMSIGQDEIQARSSDKGTSSGQKRKAEQRIVGVPQRNLRSGDPIRNFQQSSGGAGDTTREKPLCNTCGKRHLGRCLMGTRVCYKCKQEGHMADRCH
H

CSPI07G00060 (gene) of Cucumber (PI 183967) v1 genome