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CSPI07G00170 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G00170
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionlate embryogenesis abundant protein-like
Genome locationChr7:258831..260495
RNA-Seq ExpressionCSPI07G00170
SyntenyCSPI07G00170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033798.1 putative dehydrin LEA [Cucumis melo var. makuwa]9.2e-0971.43Show/hide
Query:  MYGTSVATIR----------LTDEQNPVVLTDEHGNPMWLSDVETKVVQ
        MYGTSVATIR          LTDE NPVVLTDEHGNPMWL+D+ETKVV+
Subjt:  MYGTSVATIR----------LTDEQNPVVLTDEHGNPMWLSDVETKVVQ
KGN43153.1 hypothetical protein Csa_020434 [Cucumis sativus]1.8e-3397.3Show/hide
Query:  MYGTSVATIRLTDEQNPVVLTDEHGNPMWLSDVETKVVQQVVQEVAYGDGEQPLQPHEKDEDCGSSSHGRLCFG
        MYGTSVATIRLTDE NPVVLTDEHGNPMWLSDVETKVVQQVVQEVAYGDGEQPLQPHEKDEDCGSSSH RLCFG
Subjt:  MYGTSVATIRLTDEQNPVVLTDEHGNPMWLSDVETKVVQQVVQEVAYGDGEQPLQPHEKDEDCGSSSHGRLCFG
XP_038887694.1 late embryogenesis abundant protein-like isoform X1 [Benincasa hispida]3.9e-0743.24Show/hide
Query:  IRLTDEQ-NPVVLTDEHGNPMWLSDVETKV-----------------------VQQVVQEVAYGDGEQPLQPHEKDEDCGSSSHGRLCFGRGGRGRRKDQ
        IRLTDEQ NPV+LTDEHGNPMWL+ V TKV                         Q      YGD EQ L PHE+DED GS+ H R     G     ++Q
Subjt:  IRLTDEQ-NPVVLTDEHGNPMWLSDVETKV-----------------------VQQVVQEVAYGDGEQPLQPHEKDEDCGSSSHGRLCFGRGGRGRRKDQ

Query:  HRIKREIKGRK
        +  K E K +K
Subjt:  HRIKREIKGRK
XP_038887695.1 embryogenic cell protein 40-like isoform X2 [Benincasa hispida]1.3e-0748.84Show/hide
Query:  IRLTDEQ-NPVVLTDEHGNPMWLSDVETKV-----------------------VQQVVQEVAYGDGEQPLQPHEKDEDCGSSSHGR
        IRLTDEQ NPV+LTDEHGNPMWL+ V TKV                         Q      YGD EQ L PHE+DED GS+ H R
Subjt:  IRLTDEQ-NPVVLTDEHGNPMWLSDVETKV-----------------------VQQVVQEVAYGDGEQPLQPHEKDEDCGSSSHGR
TrEMBL top hitse value%identityAlignment
A0A0A0K124 Uncharacterized protein8.9e-3497.3Show/hide
Query:  MYGTSVATIRLTDEQNPVVLTDEHGNPMWLSDVETKVVQQVVQEVAYGDGEQPLQPHEKDEDCGSSSHGRLCFG
        MYGTSVATIRLTDE NPVVLTDEHGNPMWLSDVETKVVQQVVQEVAYGDGEQPLQPHEKDEDCGSSSH RLCFG
Subjt:  MYGTSVATIRLTDEQNPVVLTDEHGNPMWLSDVETKVVQQVVQEVAYGDGEQPLQPHEKDEDCGSSSHGRLCFG
A0A5A7ST54 Putative dehydrin LEA4.4e-0971.43Show/hide
Query:  MYGTSVATIR----------LTDEQNPVVLTDEHGNPMWLSDVETKVVQ
        MYGTSVATIR          LTDE NPVVLTDEHGNPMWL+D+ETKVV+
Subjt:  MYGTSVATIR----------LTDEQNPVVLTDEHGNPMWLSDVETKVVQ
A0A6J1C1Y9 late embryogenesis abundant protein-like5.6e-0449.25Show/hide
Query:  IRLTDE-QNPVVLTDEHGNPMWLSDVETKVVQQVVQEV----------AYGDGEQPLQPHEKDEDCG
        I LTDE  NPVVLTDEHGNPM L+ V TK+   +   +           +GDGEQ L PHE  +D G
Subjt:  IRLTDE-QNPVVLTDEHGNPMWLSDVETKVVQQVVQEV----------AYGDGEQPLQPHEKDEDCG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGGGACGAGCGTGGCAACCATCCGACTCACCGACGAGCAGAATCCGGTTGTGCTGACTGATGAACATGGCAACCCCATGTGGCTCAGTGACGTCGAAACCAAGGT
AGTTCAGCAGGTGGTTCAGGAGGTGGCTTATGGCGACGGTGAGCAGCCGTTGCAGCCACATGAGAAGGATGAAGATTGTGGCTCTAGTTCCCACGGCAGGCTCTGCTTCG
GAAGAGGGGGAAGAGGAAGAAGAAAAGACCAACATAGAATAAAAAGAGAAATTAAGGGGAGGAAGATATAA
mRNA sequenceShow/hide mRNA sequence
ATGTACGGGACGAGCGTGGCAACCATCCGACTCACCGACGAGCAGAATCCGGTTGTGCTGACTGATGAACATGGCAACCCCATGTGGCTCAGTGACGTCGAAACCAAGGT
AGTTCAGCAGGTGGTTCAGGAGGTGGCTTATGGCGACGGTGAGCAGCCGTTGCAGCCACATGAGAAGGATGAAGATTGTGGCTCTAGTTCCCACGGCAGGCTCTGCTTCG
GAAGAGGGGGAAGAGGAAGAAGAAAAGACCAACATAGAATAAAAAGAGAAATTAAGGGGAGGAAGATATAAAGAGGAGTGCCTTCAGCTTCTCCCATGAC
Protein sequenceShow/hide protein sequence
MYGTSVATIRLTDEQNPVVLTDEHGNPMWLSDVETKVVQQVVQEVAYGDGEQPLQPHEKDEDCGSSSHGRLCFGRGGRGRRKDQHRIKREIKGRKI