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CSPI07G00190 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G00190
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA-binding protein 28
Genome locationChr7:265937..266086
RNA-Seq ExpressionCSPI07G00190
SyntenyCSPI07G00190
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033796.1 RNA-binding protein 28 [Cucumis melo var. makuwa]3.9e-1189.74Show/hide
Query:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
        MGKNRRLKDGADKGAAAGDHCPS VFV N PYSFTNSQ+
Subjt:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
TYK22338.1 RNA-binding protein 28 [Cucumis melo var. makuwa]3.9e-1189.74Show/hide
Query:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
        MGKNRRLKDGADKGAAAGDHCPS VFV N PYSFTNSQ+
Subjt:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
XP_004148553.1 RNA-binding protein 28 [Cucumis sativus]3.2e-1397.44Show/hide
Query:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
        MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQ+
Subjt:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
XP_008448076.1 PREDICTED: RNA-binding protein 28 [Cucumis melo]3.9e-1189.74Show/hide
Query:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
        MGKNRRLKDGADKGAAAGDHCPS VFV N PYSFTNSQ+
Subjt:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
XP_038888249.1 RNA-binding protein 28 [Benincasa hispida]7.3e-1082.05Show/hide
Query:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
        MGKN+RLKDG +KGAAAGDHCPS VFV N PYSFTNSQ+
Subjt:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
TrEMBL top hitse value%identityAlignment
A0A0A0K0D5 RRM domain-containing protein1.5e-1397.44Show/hide
Query:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
        MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQ+
Subjt:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
A0A1S3BIA6 RNA-binding protein 281.9e-1189.74Show/hide
Query:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
        MGKNRRLKDGADKGAAAGDHCPS VFV N PYSFTNSQ+
Subjt:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
A0A5A7SV08 RNA-binding protein 281.9e-1189.74Show/hide
Query:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
        MGKNRRLKDGADKGAAAGDHCPS VFV N PYSFTNSQ+
Subjt:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
A0A5D3DFV6 RNA-binding protein 281.9e-1189.74Show/hide
Query:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
        MGKNRRLKDGADKGAAAGDHCPS VFV N PYSFTNSQ+
Subjt:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
A0A6J1IG31 RNA-binding protein 28 isoform X11.0e-0979.49Show/hide
Query:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
        MGKN+R KDG +KGAAAGDHCPS VFV N PYSFTNSQ+
Subjt:  MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGAACAGAAGGCTTAAGGACGGCGCCGATAAGGGAGCCGCCGCCGGCGACCACTGCCCTTCCACAGTCTTTGTCAACAACTTCCCGTACTCGTTCACCAACTC
ACAGGTTCGTACTTCCTCTACTCCCTGCTTGTCTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGAACAGAAGGCTTAAGGACGGCGCCGATAAGGGAGCCGCCGCCGGCGACCACTGCCCTTCCACAGTCTTTGTCAACAACTTCCCGTACTCGTTCACCAACTC
ACAGGTTCGTACTTCCTCTACTCCCTGCTTGTCTTCTTAG
Protein sequenceShow/hide protein sequence
MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQVRTSSTPCLSS