; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G00310 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G00310
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCRM domain-containing protein
Genome locationChr7:378353..381412
RNA-Seq ExpressionCSPI07G00310
SyntenyCSPI07G00310
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588422.1 hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sororia]6.8e-9774.48Show/hide
Query:  MGASIISSHS-----HSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIED
        MGASI+SS S     HSLLLRS+PSS STF  +PS  A IS  C HQFKP+SS FL R+SPH  R FTPSA +SFSRSFSSTISD S V F++ DD I+D
Subjt:  MGASIISSHS-----HSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIED

Query:  KDESDYEDEVEMED------EVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
         +ESDYEDEVE+ED       V DG ET VAS+ SS ++S +EVKNIPSLT+KEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
Subjt:  KDESDYEDEVEMED------EVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK

Query:  ILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSR
        +LGNCP ELEDVVR+L ESTGSVVV++IGRTVIIYRPSI+KMKAEEEKRRARK+Y+RKEPDRVK  LQ K++TP+SSNRGRRG+SR
Subjt:  ILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSR

XP_004148536.1 uncharacterized protein LOC101213060 [Cucumis sativus]5.9e-14199.64Show/hide
Query:  MGASIISSHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESD
        MGASIISSHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSST LTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESD
Subjt:  MGASIISSHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESD

Query:  YEDEVEMEDEVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED
        YEDEVEMEDEVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED
Subjt:  YEDEVEMEDEVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED

Query:  VVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSRQINL
        VVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSRQINL
Subjt:  VVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSRQINL

XP_008448058.1 PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]1.8e-12689.4Show/hide
Query:  MGASIIS----SHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDK
        M ASIIS    SHSHSLLLRS+PSSFSTFFSKPSA AA STVCFHQFKPSSSTFLTR+SPH+ RPFTPS  LSFSR FSST+S PSEV FDE DDEIEDK
Subjt:  MGASIIS----SHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDK

Query:  DESDYEDEVEMEDEVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
        DESDYEDEVEMED VGDGTE GVASELSSP+M+RNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
Subjt:  DESDYEDEVEMEDEVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE

Query:  ELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSRQINL
        +LEDVVRKL ESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRR+RK+Y+RKEPDRVKSILQKK+ETP+SSNRGRRGTSR INL
Subjt:  ELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSRQINL

XP_023529380.1 uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo]1.6e-9873.97Show/hide
Query:  MGASIISSHS-----HSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIED
        MGASI+SS S     HSLLLRS+PSS STF S+PS  AAIS  C HQFKP+SS FL R+SPH  R F+PSA +SFSRSFSSTISD S V F++ DD I+D
Subjt:  MGASIISSHS-----HSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIED

Query:  KDESDYEDEVEMEDE------------VGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEAN
         DESDYEDEVE+EDE            V DG ET VAS+ SS ++SR+EVKNIPSLT+KEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEAN
Subjt:  KDESDYEDEVEMEDE------------VGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEAN

Query:  ELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSR
        ELLKIK+LGNCP ELEDVV++L ESTGSVVV++IGRTVIIYRPSI+KMKAEEEKRRARK+Y+RKEPDRVK  LQ K++TP+SSNRGRRG+SR
Subjt:  ELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSR

XP_038888218.1 uncharacterized protein LOC120078082 [Benincasa hispida]2.2e-11183.75Show/hide
Query:  MGASIISSHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESD
        MGASIIS HSHSLLLRS+PSSFSTFFSKPSAAAA + VCF+QFKP SS F TRES HH R F PS  LSF RSF+STIS PSE  FDE DDEIED+DESD
Subjt:  MGASIISSHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESD

Query:  YEDEVEMEDE--VGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEEL
        YEDEVE+E E  V DG ETGVASELSS +++RNEVKNIPSLTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEEL
Subjt:  YEDEVEMEDE--VGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEEL

Query:  EDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSR
        ED VRKL ESTGSVVVNQIGRTVIIYRPSITKMKAE++KR+ARK+Y+RKE DRVKSILQ KI+TP+SSNRGRRG+SR
Subjt:  EDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSR

TrEMBL top hitse value%identityAlignment
A0A0A0K2C3 CRM domain-containing protein2.8e-14199.64Show/hide
Query:  MGASIISSHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESD
        MGASIISSHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSST LTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESD
Subjt:  MGASIISSHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESD

Query:  YEDEVEMEDEVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED
        YEDEVEMEDEVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED
Subjt:  YEDEVEMEDEVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED

Query:  VVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSRQINL
        VVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSRQINL
Subjt:  VVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSRQINL

A0A1S3BJF7 uncharacterized protein LOC1034903508.9e-12789.4Show/hide
Query:  MGASIIS----SHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDK
        M ASIIS    SHSHSLLLRS+PSSFSTFFSKPSA AA STVCFHQFKPSSSTFLTR+SPH+ RPFTPS  LSFSR FSST+S PSEV FDE DDEIEDK
Subjt:  MGASIIS----SHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDK

Query:  DESDYEDEVEMEDEVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
        DESDYEDEVEMED VGDGTE GVASELSSP+M+RNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
Subjt:  DESDYEDEVEMEDEVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE

Query:  ELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSRQINL
        +LEDVVRKL ESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRR+RK+Y+RKEPDRVKSILQKK+ETP+SSNRGRRGTSR INL
Subjt:  ELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSRQINL

A0A5D3DFJ1 Putative RNA-binding CRS1 / YhbY domain protein1.9e-7694.51Show/hide
Query:  ETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVN
        ETGVASELSSP+M+RNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKL ESTGSVVVN
Subjt:  ETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVN

Query:  QIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSRQINL
        QIGRTVIIYRPSITKMKAEEEKRR+RK+Y+RKEPDRVKSILQKK+ETP+SSNRGRRGTSR INL
Subjt:  QIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSRQINL

A0A6J1C409 uncharacterized protein LOC1110077231.1e-6070.97Show/hide
Query:  ESDYEDEVEM------EDEVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL
        +SDYE EV +      E+ +G  ++    S+LSS +++ +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIKIL
Subjt:  ESDYEDEVEM------EDEVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL

Query:  GNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETP--QSSNRGRRGTSR
         NCP EL+D VR+L ESTGSVVV+QIGRTVIIYRPSI+KMKAEE+KR+ARK+Y+RKEPDRVKSILQ K++TP   +SNRGRRG+SR
Subjt:  GNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETP--QSSNRGRRGTSR

A0A6J1I2Z3 uncharacterized protein LOC1114700609.6e-9774.13Show/hide
Query:  MGASIISSHS-----HSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIED
        MGASI+SS S     HSLLLRS+PSS STF  +PS  A IS  C HQFKP+SS FL R+SPH  R FTPSA +SFSRSFSS IS  S V F++ DD I+D
Subjt:  MGASIISSHS-----HSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIED

Query:  KDESDYEDEVEMED------EVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
         DESDYEDEVE+ED       V DG ET VAS+ SS ++SR+EVK+IPSLT+KEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
Subjt:  KDESDYEDEVEMED------EVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK

Query:  ILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSR
        +LGNCP ELEDVVR+L ESTGSVVV++IGRTVIIYRPSI+KMKAEEEKRRARK+Y+RKEPDRVK  LQ K++TP+SSNRGRRG+SR
Subjt:  ILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSR

SwissProt top hitse value%identityAlignment
P0AGK4 RNA-binding protein YhbY4.4e-0633.33Show/hide
Query:  SLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E    +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPS

P0AGK5 RNA-binding protein YhbY4.4e-0633.33Show/hide
Query:  SLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E    +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPS

P0AGK6 RNA-binding protein YhbY4.4e-0633.33Show/hide
Query:  SLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E    +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPS

P0AGK7 RNA-binding protein YhbY4.4e-0633.33Show/hide
Query:  SLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E    +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPS

P54454 Probable RNA-binding protein YqeI7.2e-0939.33Show/hide
Query:  LTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPS
        LT K+K+ L S AH L    +   VGK GV   +     E LEA EL+K+ +L NC E+  DV   L + + S +V  IG T+++Y+ S
Subjt:  LTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPS

Arabidopsis top hitse value%identityAlignment
AT2G21350.1 RNA-binding CRS1 / YhbY (CRM) domain protein9.6e-3343.04Show/hide
Query:  ASIISSHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESDYE
        +S +++  H LL    P+S    F +P + + +     H    SSS  L        RP+   +PL   +SFSS          DE+     ++DE +  
Subjt:  ASIISSHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESDYE

Query:  DEVEMEDEVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVV
            + +   DG E G  SEL+   M  N   +   L+ KEK++LASYAH LG KLKSQLVGKSGVT  +  SF+ETLE NELLK+KI   CP ELED++
Subjt:  DEVEMEDEVGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVV

Query:  RKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRR
         +L E+TGSV V QI RTVI+YRPS TK+KA+E+K+R
Subjt:  RKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRR

AT3G01370.1 CRM family member 27.2e-0429.82Show/hide
Query:  GTETGVASELSSPIMSRNEVKN-IPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNC-PEELEDVVRKLAESTGS
        G+ TG  S++S+    ++E    +  L+ +E+  L   A  + KK     VG+S V  GLA +     + N L  + + G      +++V+ KL E TG+
Subjt:  GTETGVASELSSPIMSRNEVKN-IPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNC-PEELEDVVRKLAESTGS

Query:  VVVNQIGRTVIIYR
        ++V+Q    VI+YR
Subjt:  VVVNQIGRTVIIYR

AT4G39040.1 RNA-binding CRS1 / YhbY (CRM) domain protein3.5e-3543.54Show/hide
Query:  ASIISSH-SHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESDY
        AS  S+H  H+LL    P S    F +P   +A  +   H+ KP   +F ++  P H      SA L   +SFSS I +P     +E++DE    +E +Y
Subjt:  ASIISSH-SHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESDY

Query:  EDEVEMEDEVGDG---TETGV----ASELSSPIMSRNEVK----------NIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANE
        EDE E EDE   G   +E G+    ASE  S I  + E            +   L+IKEKKELASYAH LG KLK QLVGKSGVT  +  SF+ETLE NE
Subjt:  EDEVEMEDEVGDG---TETGV----ASELSSPIMSRNEVK----------NIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANE

Query:  LLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQS---SNRGRRGTSR
        LLK+KI    P+ELED V+ L E+TGSV V QIGRTVI+YRPS TKMKAE +K+   ++ + +      +   K      S     RGRRG SR
Subjt:  LLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQS---SNRGRRGTSR

AT4G39040.2 RNA-binding CRS1 / YhbY (CRM) domain protein1.8e-3445.95Show/hide
Query:  ASIISSH-SHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESDY
        AS  S+H  H+LL    P S    F +P   +A  +   H+ KP   +F ++  P H      SA L   +SFSS I +P     +E++DE    +E +Y
Subjt:  ASIISSH-SHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESDY

Query:  EDEVEMEDEVGDG---TETGV----ASELSSPIMSRNEVK----------NIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANE
        EDE E EDE   G   +E G+    ASE  S I  + E            +   L+IKEKKELASYAH LG KLK QLVGKSGVT  +  SF+ETLE NE
Subjt:  EDEVEMEDEVGDG---TETGV----ASELSSPIMSRNEVK----------NIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANE

Query:  LLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKV
        LLK+KI    P+ELED V+ L E+TGSV V QIGRTVI+YRPS TKMKAE +K+   ++
Subjt:  LLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTTCGATAATCTCCTCTCACTCTCACTCTCTCCTTCTCCGGTCACTCCCCTCCTCCTTCTCCACCTTCTTCTCCAAACCCTCCGCCGCCGCCGCCATCTCCAC
TGTTTGTTTCCATCAATTTAAACCCAGCAGTTCAACCTTCCTCACTCGCGAATCTCCTCACCATTACCGCCCTTTCACTCCCTCCGCACCCCTTTCCTTCTCTCGCTCCT
TTTCCTCCACCATTTCCGATCCCTCCGAGGTCATATTTGATGAAGCCGACGATGAAATTGAAGACAAAGACGAAAGTGATTACGAAGATGAAGTTGAAATGGAAGATGAA
GTTGGGGATGGAACGGAAACCGGTGTGGCTTCGGAGCTGTCTTCGCCGATTATGAGTAGAAATGAAGTGAAGAATATTCCGAGCTTGACGATTAAGGAGAAGAAGGAGCT
GGCATCGTATGCTCATGGTTTGGGGAAGAAGCTGAAAAGTCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACG
AGCTTCTTAAGATCAAAATTCTCGGAAACTGTCCAGAGGAGCTTGAGGATGTGGTTAGGAAATTGGCGGAATCAACTGGCTCTGTAGTGGTGAATCAGATTGGCAGAACT
GTTATTATTTATAGGCCCAGCATTACAAAAATGAAAGCAGAGGAAGAAAAACGACGTGCCCGAAAAGTTTATATGAGAAAAGAGCCTGATCGAGTCAAATCCATTTTGCA
GAAGAAAATAGAAACACCTCAAAGTTCAAACCGTGGTCGTCGTGGAACCAGCAGGCAGATTAATCTGTAG
mRNA sequenceShow/hide mRNA sequence
ACCCAAAAAGCAAGCAAAAATGGGGGCTTCGATAATCTCCTCTCACTCTCACTCTCTCCTTCTCCGGTCACTCCCCTCCTCCTTCTCCACCTTCTTCTCCAAACCCTCCG
CCGCCGCCGCCATCTCCACTGTTTGTTTCCATCAATTTAAACCCAGCAGTTCAACCTTCCTCACTCGCGAATCTCCTCACCATTACCGCCCTTTCACTCCCTCCGCACCC
CTTTCCTTCTCTCGCTCCTTTTCCTCCACCATTTCCGATCCCTCCGAGGTCATATTTGATGAAGCCGACGATGAAATTGAAGACAAAGACGAAAGTGATTACGAAGATGA
AGTTGAAATGGAAGATGAAGTTGGGGATGGAACGGAAACCGGTGTGGCTTCGGAGCTGTCTTCGCCGATTATGAGTAGAAATGAAGTGAAGAATATTCCGAGCTTGACGA
TTAAGGAGAAGAAGGAGCTGGCATCGTATGCTCATGGTTTGGGGAAGAAGCTGAAAAGTCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATC
GAGACACTTGAAGCCAACGAGCTTCTTAAGATCAAAATTCTCGGAAACTGTCCAGAGGAGCTTGAGGATGTGGTTAGGAAATTGGCGGAATCAACTGGCTCTGTAGTGGT
GAATCAGATTGGCAGAACTGTTATTATTTATAGGCCCAGCATTACAAAAATGAAAGCAGAGGAAGAAAAACGACGTGCCCGAAAAGTTTATATGAGAAAAGAGCCTGATC
GAGTCAAATCCATTTTGCAGAAGAAAATAGAAACACCTCAAAGTTCAAACCGTGGTCGTCGTGGAACCAGCAGGCAGATTAATCTGTAGTAGGATTCACATCTAGCAAGT
TTATTTTGGAGGAACAAATTTTGAATTTTCATCCCAATGTAAGTCTTGTTCATCCCATTATTGTTCTTGTAGTTCCACTAGTTTTGATTTAATTCATTAATGTAGAGATT
TTTACTCTGCTTCCATTTCACAAGATTAGACTTAAATAAGATTATAGGGTGTGATAGAGTAAAATTGACATAGAAAATGAGTGCCTCAAAAGATGAAAACATTGGATGTT
Protein sequenceShow/hide protein sequence
MGASIISSHSHSLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTFLTRESPHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESDYEDEVEMEDE
VGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRT
VIIYRPSITKMKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSRQINL