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CSPI07G00340 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G00340
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReverse transcriptase
Genome locationChr7:396815..397438
RNA-Seq ExpressionCSPI07G00340
SyntenyCSPI07G00340
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040646.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.2e-1648.3Show/hide
Query:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVVELLEG----------------KPTLESSQGISLVSNTKGREQRQFIPG--ISRRRD
        +DKYYPSTY E KRD+FL L+Q SLSVA Y  K+TE+SRY  V+   E                 K  +E S+G S VS  +GREQR+F PG  IS R+D
Subjt:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVVELLEG----------------KPTLESSQGISLVSNTKGREQRQFIPG--ISRRRD

Query:  FKTRSSEKTYRQVSEGSVAFPRQSNRTGTM-------SQSRQESRAS
        FK RS  +  R VS GSV F RQS R  +        SQ  QES AS
Subjt:  FKTRSSEKTYRQVSEGSVAFPRQSNRTGTM-------SQSRQESRAS

KAA0042349.1 uncharacterized protein E6C27_scaffold795G00510 [Cucumis melo var. makuwa]2.6e-1653.45Show/hide
Query:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVV------ELLEGKPTLESSQGISLVSNTKGREQRQFIPG--ISRRRDFKTRSSEKTY
        KDKYY STY E KRD+F  L+Q SLSVA Y  K+TE+SRY  V+       + E K T+E S+G S  S   G EQR+F PG  IS R+DFK RS  ++ 
Subjt:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVV------ELLEGKPTLESSQGISLVSNTKGREQRQFIPG--ISRRRDFKTRSSEKTY

Query:  RQVSEGSVAFPRQSNR
        R VS GSV F RQS R
Subjt:  RQVSEGSVAFPRQSNR

KAA0058280.1 uncharacterized protein E6C27_scaffold274G006090 [Cucumis melo var. makuwa]5.3e-1746.04Show/hide
Query:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVVE--------LLEGKPTLESSQGISLVSNTKGREQRQFIPG--ISRRRDFKTRSSEK
        ++KYYP+TY E KRD+FL L+Q SLS+  Y  K+TE+SRY ++VE        ++E K T++ S+G+S  S  +GREQR+F PG  +S  +DFK RS  K
Subjt:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVVE--------LLEGKPTLESSQGISLVSNTKGREQRQFIPG--ISRRRDFKTRSSEK

Query:  TYRQVSEGSVAFPRQSNRTGTMS-------QSRQESRAS
          RQ+S GS A+ RQS R    S       ++ QES AS
Subjt:  TYRQVSEGSVAFPRQSNRTGTMS-------QSRQESRAS

KAE8645649.1 hypothetical protein Csa_023944, partial [Cucumis sativus]8.7e-2095Show/hide
Query:  NTKGREQRQFIPGISRRRDFKTRSSEKTYRQVSEGSVAFPRQSNRTGTMSQSRQESRASN
        NTKGREQRQFIP IS RRDFKTRSS+KTYRQVSEGSVAFPRQSNRTGTMSQSRQESRASN
Subjt:  NTKGREQRQFIPGISRRRDFKTRSSEKTYRQVSEGSVAFPRQSNRTGTMSQSRQESRASN

TYK11835.1 uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa]6.3e-1848.39Show/hide
Query:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVV---------ELLEGKPTLESSQGISLVSNTKGREQRQFIPG--ISRRRDFKTRSSE
        ++KYYP+TY E KRD+FL L+Q SLSVA Y  K+TE+SRY +V+          ++E K T++ S+G+S  S  +GREQR+F PG  +S  +DFK RS  
Subjt:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVV---------ELLEGKPTLESSQGISLVSNTKGREQRQFIPG--ISRRRDFKTRSSE

Query:  KTYRQVSEGSVAFPRQSNRTGTMS
        K  RQ+S GS A+ RQS R  + S
Subjt:  KTYRQVSEGSVAFPRQSNRTGTMS

TrEMBL top hitse value%identityAlignment
A0A5A7TF49 DNA/RNA polymerases superfamily protein5.7e-1748.3Show/hide
Query:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVVELLEG----------------KPTLESSQGISLVSNTKGREQRQFIPG--ISRRRD
        +DKYYPSTY E KRD+FL L+Q SLSVA Y  K+TE+SRY  V+   E                 K  +E S+G S VS  +GREQR+F PG  IS R+D
Subjt:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVVELLEG----------------KPTLESSQGISLVSNTKGREQRQFIPG--ISRRRD

Query:  FKTRSSEKTYRQVSEGSVAFPRQSNRTGTM-------SQSRQESRAS
        FK RS  +  R VS GSV F RQS R  +        SQ  QES AS
Subjt:  FKTRSSEKTYRQVSEGSVAFPRQSNRTGTM-------SQSRQESRAS

A0A5A7TLX3 Retrotrans_gag domain-containing protein1.3e-1653.45Show/hide
Query:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVV------ELLEGKPTLESSQGISLVSNTKGREQRQFIPG--ISRRRDFKTRSSEKTY
        KDKYY STY E KRD+F  L+Q SLSVA Y  K+TE+SRY  V+       + E K T+E S+G S  S   G EQR+F PG  IS R+DFK RS  ++ 
Subjt:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVV------ELLEGKPTLESSQGISLVSNTKGREQRQFIPG--ISRRRDFKTRSSEKTY

Query:  RQVSEGSVAFPRQSNR
        R VS GSV F RQS R
Subjt:  RQVSEGSVAFPRQSNR

A0A5A7UFH6 DNA/RNA polymerases superfamily protein1.7e-1647.48Show/hide
Query:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVVELLEG---------KPTLESSQGISLVSNTKGREQRQFIPG--ISRRRDFKTRSSE
        +DKYYPSTY E KRD+FL L+Q SL VA Y  K+TE+SRY +V+   E          K  +E S+G S  S  +GREQR+F PG  IS R+DFK RS  
Subjt:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVVELLEG---------KPTLESSQGISLVSNTKGREQRQFIPG--ISRRRDFKTRSSE

Query:  KTYRQVSEGSV------AFPRQSNRTGTMSQSRQESRAS
        +  R +S GSV        P Q  R+   SQ  QES AS
Subjt:  KTYRQVSEGSV------AFPRQSNRTGTMSQSRQESRAS

A0A5A7UT17 CCHC-type domain-containing protein2.6e-1746.04Show/hide
Query:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVVE--------LLEGKPTLESSQGISLVSNTKGREQRQFIPG--ISRRRDFKTRSSEK
        ++KYYP+TY E KRD+FL L+Q SLS+  Y  K+TE+SRY ++VE        ++E K T++ S+G+S  S  +GREQR+F PG  +S  +DFK RS  K
Subjt:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVVE--------LLEGKPTLESSQGISLVSNTKGREQRQFIPG--ISRRRDFKTRSSEK

Query:  TYRQVSEGSVAFPRQSNRTGTMS-------QSRQESRAS
          RQ+S GS A+ RQS R    S       ++ QES AS
Subjt:  TYRQVSEGSVAFPRQSNRTGTMS-------QSRQESRAS

A0A5D3CJX3 CCHC-type domain-containing protein3.0e-1848.39Show/hide
Query:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVV---------ELLEGKPTLESSQGISLVSNTKGREQRQFIPG--ISRRRDFKTRSSE
        ++KYYP+TY E KRD+FL L+Q SLSVA Y  K+TE+SRY +V+          ++E K T++ S+G+S  S  +GREQR+F PG  +S  +DFK RS  
Subjt:  KDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVV---------ELLEGKPTLESSQGISLVSNTKGREQRQFIPG--ISRRRDFKTRSSE

Query:  KTYRQVSEGSVAFPRQSNRTGTMS
        K  RQ+S GS A+ RQS R  + S
Subjt:  KTYRQVSEGSVAFPRQSNRTGTMS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGATAAGTATTATCCAAGTACTTATCGGGAGATGAAGAGGGACAAATTTCTGCATTTGGAGCAGGAATCATTATCGGTAGCATATTATGGAGGGAAGTTTACAGA
AATGTCAAGATATGTTGAAGTAGTAGAGCTTCTTGAAGGCAAGCCAACATTAGAATCAAGTCAAGGGATTTCATTAGTTAGTAATACCAAAGGACGGGAGCAACGACAAT
TTATTCCTGGTATATCAAGAAGAAGGGACTTTAAAACTCGATCGAGTGAAAAGACCTACAGGCAAGTTAGTGAAGGAAGTGTAGCCTTTCCAAGACAATCAAACAGAACA
GGAACGATGTCTCAATCAAGACAGGAATCAAGAGCAAGTAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGATAAGTATTATCCAAGTACTTATCGGGAGATGAAGAGGGACAAATTTCTGCATTTGGAGCAGGAATCATTATCGGTAGCATATTATGGAGGGAAGTTTACAGA
AATGTCAAGATATGTTGAAGTAGTAGAGCTTCTTGAAGGCAAGCCAACATTAGAATCAAGTCAAGGGATTTCATTAGTTAGTAATACCAAAGGACGGGAGCAACGACAAT
TTATTCCTGGTATATCAAGAAGAAGGGACTTTAAAACTCGATCGAGTGAAAAGACCTACAGGCAAGTTAGTGAAGGAAGTGTAGCCTTTCCAAGACAATCAAACAGAACA
GGAACGATGTCTCAATCAAGACAGGAATCAAGAGCAAGTAACTGA
Protein sequenceShow/hide protein sequence
MKDKYYPSTYREMKRDKFLHLEQESLSVAYYGGKFTEMSRYVEVVELLEGKPTLESSQGISLVSNTKGREQRQFIPGISRRRDFKTRSSEKTYRQVSEGSVAFPRQSNRT
GTMSQSRQESRASN