; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G01370 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G01370
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionsignal recognition particle 43 kDa protein, chloroplastic
Genome locationChr7:1268257..1270250
RNA-Seq ExpressionCSPI07G01370
SyntenyCSPI07G01370
Gene Ontology termsGO:0009644 - response to high light intensity (biological process)
GO:0045038 - protein import into chloroplast thylakoid membrane (biological process)
GO:0070208 - protein heterotrimerization (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0080085 - signal recognition particle, chloroplast targeting (cellular component)
GO:0030674 - protein binding, bridging (molecular function)
GO:0042802 - identical protein binding (molecular function)
GO:0097718 - disordered domain specific binding (molecular function)
InterPro domainsIPR000953 - Chromo/chromo shadow domain
IPR002110 - Ankyrin repeat
IPR016197 - Chromo-like domain superfamily
IPR020683 - Ankyrin repeat-containing domain
IPR023780 - Chromo domain
IPR030300 - Signal recognition particle 43kDa protein
IPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645681.1 hypothetical protein Csa_020568 [Cucumis sativus]3.4e-18995.2Show/hide
Query:  MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDF
        MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDF
Subjt:  MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDF

Query:  IAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVEL
        IAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVEL
Subjt:  IAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVEL

Query:  GADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEY
        GADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAV              EKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEY
Subjt:  GADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEY

Query:  AVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQTQH
        AVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ+ +
Subjt:  AVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQTQH

KAG6589032.1 Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.4e-16380.38Show/hide
Query:  MEAVFLNQSLSRLKLPPKTPLP-FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQK----PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSW
        M+AVF+NQSLSRLKLPPK PLP  PSPI HL+LRR F  FTAYAV  ++P+TQQTQ+    PEDDESYGEVDGIIGSRAL DATGMEYLIKWKDGHSPSW
Subjt:  MEAVFLNQSLSRLKLPPKTPLP-FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQK----PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSW

Query:  VPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVE
        VPSDFIAKDVVAEYETPWWTAAKKADESALKSLID+ D RDF+AVDEDGRTALLFV+GLGS  C+RILA+AG +L+HRD SGGFTALHMAAGYVKP TVE
Subjt:  VPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVE

Query:  LLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYE
        LL+ELGADPE+ D+KGRT L LA+EI+KATPRVQF RRLGLE+VI A+E+VV+E+AEVEELLEKRGKGENLEYLVKWKDGEDNEWVK  LIAEDLV D+E
Subjt:  LLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYE

Query:  AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ------TQHEAQSSNG
        AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDI+DATWEP  NVD DL+ EFE  Q        +  EAQSSNG
Subjt:  AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ------TQHEAQSSNG

XP_004153574.1 signal recognition particle 43 kDa protein, chloroplastic [Cucumis sativus]1.6e-19999.15Show/hide
Query:  MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDF
        MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDF
Subjt:  MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDF

Query:  IAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVEL
        IAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVEL
Subjt:  IAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVEL

Query:  GADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEY
        GADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEY
Subjt:  GADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEY

Query:  AVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQTQH
        AVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ+ +
Subjt:  AVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQTQH

XP_008447899.1 PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis melo]5.6e-19295.8Show/hide
Query:  MEAVFLNQSLSRLKLPPKTPL----PFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV
        MEAVFLNQSLSRLKLPPK PL    PFPS IPHLNLRRNFTHFTAYAVQSDQPITQQT KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV
Subjt:  MEAVFLNQSLSRLKLPPKTPL----PFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV

Query:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVEL
        PSDFIAKDVVAEYETPWWTAAKKAD+SAL+SLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILA+AGVNLNHRDNSGGFTALHMAAGYVKPETVEL
Subjt:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVEL

Query:  LVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEA
        LVELGADPEI+DEKGRTALELAKEILKATPRVQFMRRLGLEKVI AVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV DYEA
Subjt:  LVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEA

Query:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQTQ
        GLEYAVAEAVVGKRVGD+GKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ Q
Subjt:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQTQ

XP_038888741.1 signal recognition particle 43 kDa protein, chloroplastic [Benincasa hispida]5.2e-18288.24Show/hide
Query:  MEAVFLNQSLSRLKLPPKTPLPFP----SPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV
        M+AVF+NQSLSRLKL PK PLPFP    S  PHLNLRRNF HFT YAVQSDQP+TQQTQK EDDESYGEVDGIIGSRAL DATGMEYLIKWKDGHSPSWV
Subjt:  MEAVFLNQSLSRLKLPPKTPLPFP----SPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV

Query:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVEL
        PSDFIAKDVVAEYETPWWTAAKKADESALKSLID+GD RDFDAVDEDGRTALLFV+GLGS  CVR+LA+AGVNL+HRDNSGGFTALH+AAGYVKPETVEL
Subjt:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVEL

Query:  LVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEA
        LVELGADPEI+DEKGRT L LAKEILKATPRVQFMRR+GLE+VI AVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV D+EA
Subjt:  LVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEA

Query:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQA------QTQHEAQSSNGSAL
        GLEYAVAEAVVGKR GDDGKMEYLVKWTDIQDATWEP DNVDPDLI EFEKAQA      Q Q +AQSSNGSAL
Subjt:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQA------QTQHEAQSSNGSAL

TrEMBL top hitse value%identityAlignment
A0A0A0K634 Uncharacterized protein7.8e-20099.15Show/hide
Query:  MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDF
        MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDF
Subjt:  MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDF

Query:  IAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVEL
        IAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVEL
Subjt:  IAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVEL

Query:  GADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEY
        GADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEY
Subjt:  GADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEY

Query:  AVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQTQH
        AVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ+ +
Subjt:  AVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQTQH

A0A1S3BHX6 signal recognition particle 43 kDa protein, chloroplastic2.7e-19295.8Show/hide
Query:  MEAVFLNQSLSRLKLPPKTPL----PFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV
        MEAVFLNQSLSRLKLPPK PL    PFPS IPHLNLRRNFTHFTAYAVQSDQPITQQT KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV
Subjt:  MEAVFLNQSLSRLKLPPKTPL----PFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV

Query:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVEL
        PSDFIAKDVVAEYETPWWTAAKKAD+SAL+SLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILA+AGVNLNHRDNSGGFTALHMAAGYVKPETVEL
Subjt:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVEL

Query:  LVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEA
        LVELGADPEI+DEKGRTALELAKEILKATPRVQFMRRLGLEKVI AVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV DYEA
Subjt:  LVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEA

Query:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQTQ
        GLEYAVAEAVVGKRVGD+GKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ Q
Subjt:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQTQ

A0A6J1C248 signal recognition particle 43 kDa protein, chloroplastic4.7e-15275.68Show/hide
Query:  MEAVFLNQSLSRLKLPPK-TPLP--FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQ------KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGH
        M+A+FLNQS+SRLK+ PK +PLP  +PS IP+ NL+     F+A AVQ+DQ + QQ+       K  +DE+YGEVDGIIGSRAL D +GMEYLI WKDGH
Subjt:  MEAVFLNQSLSRLKLPPK-TPLP--FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQ------KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGH

Query:  SPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKP
        +PSWVPSDFIA+DVVAEYETPWWTAAKKADESALKSLID+ D RD DAVDEDGRTALLFV+GLGS  CVR+LA+ G N++HRDNSGGFTALHMAAGYVKP
Subjt:  SPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKP

Query:  ETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV
          VE L++LGA PE++DEKGRTALELA+EILKATPR+QF RR+GLE+V+ A+EK V+EYAEVE LLEKRGKGENLEYLVKWKDGEDNEWVK GLIA DLV
Subjt:  ETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV

Query:  GDYEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQTQHEAQSSNG
         D+EAGLEYAVAEAV GKR+GDDGKMEYLVKWTDI+DATWEPLDNVDPDLI EFE AQ      AQSSNG
Subjt:  GDYEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQTQHEAQSSNG

A0A6J1EP65 signal recognition particle 43 kDa protein, chloroplastic-like1.2e-16380.38Show/hide
Query:  MEAVFLNQSLSRLKLPPKTPLP-FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQK----PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSW
        M+AVF+NQSLSRLKLPPK PLP  PSPI HL+LRR F  FTAYAV  ++P+TQQTQ+    PEDDESYGEVDGIIGSRAL DATGMEYLIKWKDGHSPSW
Subjt:  MEAVFLNQSLSRLKLPPKTPLP-FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQK----PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSW

Query:  VPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVE
        VPSDFIAKDVVAEYETPWWTAAKKADESALKSLID+ D RDF+AVDEDGRTALLFV+GLGS  C+RILA+AG +L+HRD SGGFTALHMAAGYVKP TVE
Subjt:  VPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVE

Query:  LLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYE
        LL+ELGADPE+ D+KGRT L LA+EI+KATPRVQF RRLGLE+VI A+E+VV+E+AEVEELLEKRGKGENLEYLVKWKDGEDNEWVK  LIAEDLV D+E
Subjt:  LLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYE

Query:  AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ------TQHEAQSSNG
        AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDI+DATWEP  NVD DL+ EFE  Q        +  EAQSSNG
Subjt:  AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ------TQHEAQSSNG

A0A6J1JM92 signal recognition particle 43 kDa protein, chloroplastic2.9e-16280.11Show/hide
Query:  MEAVFLNQSLSRLKLPPKTPLP-FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQK----PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSW
        M+AVF+NQSLS LKLPPK PLP  PSPI HL+LRR F  FTAYAV  ++P+TQQTQ+    PEDDESYGEVDGIIGSR+L DATGMEYLIKWKDGHSPSW
Subjt:  MEAVFLNQSLSRLKLPPKTPLP-FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQK----PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSW

Query:  VPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVE
        VPSDFIAKDVVAEYETPWWTAAKKADESALKSLID+ D RDF+AVDEDGRTALLFV+GLGS  CVRILA+AG +L+HRD SGGFTALHMAAGYVKP TVE
Subjt:  VPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVE

Query:  LLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYE
        LL+ELGADPE+ D+KGRT L LA+EI+KATPRVQF RRLGLE+VI A+E+VV+E+AEVEELLEKRGKGENLEYLVKWKDGEDNEWVK  LIAEDLV D+E
Subjt:  LLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYE

Query:  AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ------AQTQHEAQSSNG
        AGLEYAVAEAVVGKR+GDDGKMEYLVKWTDI+DATWEP  NVD DLI EFE  Q        +  EAQSSNG
Subjt:  AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ------AQTQHEAQSSNG

SwissProt top hitse value%identityAlignment
O22265 Signal recognition particle 43 kDa protein, chloroplastic1.8e-11360.38Show/hide
Query:  AVFLNQSLSRLKL-PPKTPLP-----FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQT--QKPEDDE---SYGEVDGIIGSRALPDATGMEYLIKWKDGH
        A+ ++QSLSR+KL PPK+         P  +P   +   F      AVQ +   T  +  +  EDDE   SYGEV+ IIGSR   +   MEYLI+WKDGH
Subjt:  AVFLNQSLSRLKL-PPKTPLP-----FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQT--QKPEDDE---SYGEVDGIIGSRALPDATGMEYLIKWKDGH

Query:  SPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKP
        SPSWVPS +IA DVV+EYETPWWTAA+KADE AL  L+   ++RD DAVDE+GRTALLFV+GLGS +CVR+LA+AG +L+HRD  GG TALHMAAGYV+P
Subjt:  SPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKP

Query:  ETVELLVELGADPEIDDEKGRTALELAKEILKATPR---VQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAE
        E VE LVELGAD E++DE+G TALELA+EILK TP+   +QF RR+GLEKVI  +E  V+EYAEV+E++EKRGKG+++EYLV+WKDG D EWVK   +AE
Subjt:  ETVELLVELGADPEIDDEKGRTALELAKEILKATPR---VQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAE

Query:  DLVGDYEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQTQ
        D+  DYE GLEYAVAE+V+GKRVGDDGK +EYLVKWTD+ DATWEP DNVD  L+  +++ Q   +
Subjt:  DLVGDYEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQTQ

Q29Q26 Ankyrin repeat domain-containing protein 2B3.8e-1038.83Show/hide
Query:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALE
        A   D   LK+ + SG  +D +  D +GRTAL F  G G V C ++L DAG N N  D +   T LH AAGY + E V LL+E GA     +   +  ++
Subjt:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALE

Query:  LAK
        +A+
Subjt:  LAK

Q8LSQ2 Probable signal recognition particle 43 kDa protein, chloroplastic1.4e-9250.13Show/hide
Query:  MEAVFLNQSLSRLKLP----PKTP-----LPFPSPIPHLNLRRNFTHFTAYAVQSDQ--PITQQTQKPEDDESYGEVDGIIGSRALPD-----------A
        MEAV  + SLSRLK P     +TP     +PF   +P+  L       TA AV  DQ  P    ++  +DDE+YGEVD I+ SR + +            
Subjt:  MEAVFLNQSLSRLKLP----PKTP-----LPFPSPIPHLNLRRNFTHFTAYAVQSDQ--PITQQTQKPEDDESYGEVDGIIGSRALPD-----------A

Query:  TGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLI-DSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNS-
        T  EYL++WKDGH PSW+P++ IA DVVAEYETPWWTAAKKAD + + +L+ D    RD DA D  GRTA+ F +GLGS ECVR LA+AG ++   + + 
Subjt:  TGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLI-DSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNS-

Query:  GGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPR---VQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWK
        GG T LH+A GY +P  V  L+ELGA+PE  D +GRT LEL +++L  TP+     F RRL LE   + +EK VYE+ EVE++++ RG+G+  EYLV+W+
Subjt:  GGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPR---VQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWK

Query:  DGEDNEWVKVGLIAEDLVGDYEAGLEYAVAEAVVGKR--VGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQA
        DG D EWV+   +AEDLV D++AGLEYAVAEAVV KR     +GK EYLVKW DI++ATWEP +NVD +L+ EFE+ Q+
Subjt:  DGEDNEWVKVGLIAEDLVGDYEAGLEYAVAEAVVGKR--VGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQA

Q9SAR5 Ankyrin repeat domain-containing protein 2A7.7e-1135.83Show/hide
Query:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALE
        A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C ++L DAG ++N  D +   T LH AAGY + E V LL+E GA   + +   +T ++
Subjt:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALE

Query:  LAK-----EILKATPRVQFM
        +AK     E++K   +  F+
Subjt:  LAK-----EILKATPRVQFM

V6CLA2 E3 ubiquitin-protein ligase hecd-17.7e-1133.86Show/hide
Query:  SWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPET
        S V  D+ A             A ++ D +AL   I+SG + D +  D+ G++   + S  GS+E V+ L D G ++N    S   ++LH AA + +P+ 
Subjt:  SWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPET

Query:  VELLVELGADPEIDDEKGRTALELAKE
        V+LL++ GA+P++ DE G+TAL+ A+E
Subjt:  VELLVELGADPEIDDEKGRTALELAKE

Arabidopsis top hitse value%identityAlignment
AT2G47450.1 chloroplast signal recognition particle component (CAO)1.3e-11460.38Show/hide
Query:  AVFLNQSLSRLKL-PPKTPLP-----FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQT--QKPEDDE---SYGEVDGIIGSRALPDATGMEYLIKWKDGH
        A+ ++QSLSR+KL PPK+         P  +P   +   F      AVQ +   T  +  +  EDDE   SYGEV+ IIGSR   +   MEYLI+WKDGH
Subjt:  AVFLNQSLSRLKL-PPKTPLP-----FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQT--QKPEDDE---SYGEVDGIIGSRALPDATGMEYLIKWKDGH

Query:  SPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKP
        SPSWVPS +IA DVV+EYETPWWTAA+KADE AL  L+   ++RD DAVDE+GRTALLFV+GLGS +CVR+LA+AG +L+HRD  GG TALHMAAGYV+P
Subjt:  SPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKP

Query:  ETVELLVELGADPEIDDEKGRTALELAKEILKATPR---VQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAE
        E VE LVELGAD E++DE+G TALELA+EILK TP+   +QF RR+GLEKVI  +E  V+EYAEV+E++EKRGKG+++EYLV+WKDG D EWVK   +AE
Subjt:  ETVELLVELGADPEIDDEKGRTALELAKEILKATPR---VQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAE

Query:  DLVGDYEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQTQ
        D+  DYE GLEYAVAE+V+GKRVGDDGK +EYLVKWTD+ DATWEP DNVD  L+  +++ Q   +
Subjt:  DLVGDYEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQTQ

AT4G35450.1 ankyrin repeat-containing protein 25.5e-1235.83Show/hide
Query:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALE
        A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C ++L DAG ++N  D +   T LH AAGY + E V LL+E GA   + +   +T ++
Subjt:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALE

Query:  LAK-----EILKATPRVQFM
        +AK     E++K   +  F+
Subjt:  LAK-----EILKATPRVQFM

AT4G35450.2 ankyrin repeat-containing protein 25.5e-1235.83Show/hide
Query:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALE
        A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C ++L DAG ++N  D +   T LH AAGY + E V LL+E GA   + +   +T ++
Subjt:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALE

Query:  LAK-----EILKATPRVQFM
        +AK     E++K   +  F+
Subjt:  LAK-----EILKATPRVQFM

AT4G35450.3 ankyrin repeat-containing protein 25.5e-1235.83Show/hide
Query:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALE
        A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C ++L DAG ++N  D +   T LH AAGY + E V LL+E GA   + +   +T ++
Subjt:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALE

Query:  LAK-----EILKATPRVQFM
        +AK     E++K   +  F+
Subjt:  LAK-----EILKATPRVQFM

AT4G35450.4 ankyrin repeat-containing protein 25.5e-1235.83Show/hide
Query:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALE
        A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C ++L DAG ++N  D +   T LH AAGY + E V LL+E GA   + +   +T ++
Subjt:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALE

Query:  LAK-----EILKATPRVQFM
        +AK     E++K   +  F+
Subjt:  LAK-----EILKATPRVQFM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCGTCTTCCTCAATCAATCTCTCTCTCGCCTTAAACTTCCCCCTAAAACCCCTCTCCCTTTCCCCTCTCCAATCCCCCATCTCAATCTCCGCCGCAACTTTAC
TCATTTCACCGCTTACGCCGTTCAAAGCGACCAACCCATCACGCAACAAACCCAAAAGCCAGAAGACGACGAATCCTACGGTGAAGTCGATGGCATCATCGGCAGCCGTG
CTCTGCCCGACGCTACTGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCCCCTTCATGGGTTCCTTCTGATTTCATCGCCAAAGATGTTGTAGCCGAGTACGAA
ACTCCCTGGTGGACCGCCGCAAAGAAAGCCGATGAATCCGCTCTCAAATCGCTTATAGATTCTGGTGATGAACGCGATTTCGATGCGGTGGATGAAGATGGGAGAACCGC
TCTTCTGTTTGTATCTGGGCTTGGGTCTGTGGAATGTGTGAGAATATTGGCGGACGCCGGAGTGAATCTTAACCACCGTGATAACAGCGGTGGGTTTACAGCTTTGCATA
TGGCGGCAGGGTATGTGAAACCAGAGACGGTGGAGTTGTTGGTGGAATTGGGGGCGGATCCGGAGATTGACGATGAGAAGGGAAGGACGGCATTGGAGTTAGCGAAGGAG
ATACTGAAAGCGACGCCGAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAAGGTGATCAGAGCGGTGGAGAAGGTGGTATATGAGTACGCGGAGGTGGAGGAATTGCT
GGAGAAGAGAGGGAAAGGGGAGAATTTGGAGTACTTGGTGAAATGGAAAGATGGAGAGGATAATGAGTGGGTGAAAGTGGGGTTGATTGCGGAGGACTTGGTGGGAGATT
ATGAAGCAGGGTTGGAATATGCGGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGGGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGACGCCACG
TGGGAGCCTTTGGATAATGTGGATCCGGATTTGATTAACGAGTTTGAGAAGGCCCAGGCCCAAACCCAACATGAGGCCCAATCCAGTAATGGTAGCGCCCTTTGA
mRNA sequenceShow/hide mRNA sequence
TGGATGTAGAACTTAATTGAATCTTCCATTCACTCTGTTTGTTGATTCATTTGGTTAAAACAAGTGTTCAATAAACTAAATCGAATTCAAAGTTGAGAGCTGTGAAATAA
ACCAAAAAAACAACACACTAACAAAGTGTAGAAAATTTCTCTAACTAAAACGACAGCCATGGATTCCATCCATTTCCTTATCCATAATTTCCTCTTATCTCAGATTTTCC
ATACCCCACCTTCTGTAAACGACACCGTTCCTCCCTCTCCAACCCCTTCTTCCACTTCCCTTCTCCTCCTCCTCCTCCTCCTTCACAACCGCCATCCACACATTCCTCCA
TGGAAGCCGTCTTCCTCAATCAATCTCTCTCTCGCCTTAAACTTCCCCCTAAAACCCCTCTCCCTTTCCCCTCTCCAATCCCCCATCTCAATCTCCGCCGCAACTTTACT
CATTTCACCGCTTACGCCGTTCAAAGCGACCAACCCATCACGCAACAAACCCAAAAGCCAGAAGACGACGAATCCTACGGTGAAGTCGATGGCATCATCGGCAGCCGTGC
TCTGCCCGACGCTACTGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCCCCTTCATGGGTTCCTTCTGATTTCATCGCCAAAGATGTTGTAGCCGAGTACGAAA
CTCCCTGGTGGACCGCCGCAAAGAAAGCCGATGAATCCGCTCTCAAATCGCTTATAGATTCTGGTGATGAACGCGATTTCGATGCGGTGGATGAAGATGGGAGAACCGCT
CTTCTGTTTGTATCTGGGCTTGGGTCTGTGGAATGTGTGAGAATATTGGCGGACGCCGGAGTGAATCTTAACCACCGTGATAACAGCGGTGGGTTTACAGCTTTGCATAT
GGCGGCAGGGTATGTGAAACCAGAGACGGTGGAGTTGTTGGTGGAATTGGGGGCGGATCCGGAGATTGACGATGAGAAGGGAAGGACGGCATTGGAGTTAGCGAAGGAGA
TACTGAAAGCGACGCCGAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAAGGTGATCAGAGCGGTGGAGAAGGTGGTATATGAGTACGCGGAGGTGGAGGAATTGCTG
GAGAAGAGAGGGAAAGGGGAGAATTTGGAGTACTTGGTGAAATGGAAAGATGGAGAGGATAATGAGTGGGTGAAAGTGGGGTTGATTGCGGAGGACTTGGTGGGAGATTA
TGAAGCAGGGTTGGAATATGCGGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGGGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGACGCCACGT
GGGAGCCTTTGGATAATGTGGATCCGGATTTGATTAACGAGTTTGAGAAGGCCCAGGCCCAAACCCAACATGAGGCCCAATCCAGTAATGGTAGCGCCCTTTGACAAACC
CTTTCCTCCCCAAGTATGTATTTAAACTAGAGATTTTTTTCTTCTAATATTGGAAAAATCTTAAAAAAAAAAGAAAAAAAAAGAAAAAAGAAAGAAGAGATTCATAATAT
ATACTCTCCTTTTTGAATGTGTCCTTTTACTATGGATTGCGGGTAGATTAAATTTGATTTAAAGTATAATATGTTAAGTAGATAAAATATAGTAATATTGAAGATGAAAA
TACATATATATATGTATGGATGGGGTAATAAGATAAGCATTTGAAGAAGAAGAATGAATAGAATAATAAGGGACAATGGGGGGCAAAAAGGTAAAATATTGAATCCATCC
ATTTACACTAAACTAAGACCTCCCAACAAACCCTTGACCTGAGTGATAAAATACCGAAGCCGGCACGGCCGCCCCCCCAGTTTCCTTTAACCGGTGGATTCTAATTTCTA
AAGTTTTGAAATCATTTTCTTAAACCAATATTTACTTTTTAAATATTCATATCATACATTGACTTTGTGGACATATTCAAATCAGCGCCAATAATTACCAAAATTTCTTT
TCTTTTAGTTCAAC
Protein sequenceShow/hide protein sequence
MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYE
TPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKE
ILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDAT
WEPLDNVDPDLINEFEKAQAQTQHEAQSSNGSAL