CuGenDBv2

Gene ID	CSPI07G01820
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat (PPR) superfamily protein
Genome location	Chr7:1589923..1594385
RNA-Seq Expression	CSPI07G01820
Synteny	CSPI07G01820
Gene Ontology terms	GO:0005635 - nuclear envelope (cellular component) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029159 - Casein Kinase 2 substrate IPR038985 - At5g43822-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144893.1 uncharacterized protein At5g43822 isoform X2 [Cucumis sativus]

1.1e-104

100

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA

XP_008447827.1 PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo]

1.1e-101

96.5

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEV+FVFDTILVLEA
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA

XP_008447828.1 PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo]

1.5e-98

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGR   LQDPKNFGSLSGMDGIVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEV+FVFDTILVLEA
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA

XP_016900442.1 PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo]

6.8e-99

95.5

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLM+LC+MHRS+  LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEV+FVFDTILVLEA
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA

XP_022928127.1 uncharacterized protein At5g43822 isoform X3 [Cucurbita moschata]

7.3e-93

89.5

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF NASSIIGRLQ+LQDP N+GSLSGMDGIV+ALLAKQMESLQL FSSI KTMEELGNIV SMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQL+KGGSNQPS KQLQQ+VGLKPSLEDCLNGL LLC MHRSEY+LKES+VSALPELFWK RNH AQDLSSL QLLVDQPNI+KEEVEF+FDTILV EA
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K4X9 Uncharacterized protein

5.2e-105

100

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA

A0A1S3BIA7 uncharacterized protein At5g43822 isoform X1

5.4e-102

96.5

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEV+FVFDTILVLEA
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA

A0A1S3BIY0 uncharacterized protein At5g43822 isoform X3

7.3e-99

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGR   LQDPKNFGSLSGMDGIVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEV+FVFDTILVLEA
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA

A0A1S4DWT4 uncharacterized protein At5g43822 isoform X2

3.3e-99

95.5

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLM+LC+MHRS+  LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEV+FVFDTILVLEA
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA

A0A6J1EJ12 uncharacterized protein At5g43822 isoform X3

3.5e-93

89.5

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF NASSIIGRLQ+LQDP N+GSLSGMDGIV+ALLAKQMESLQL FSSI KTMEELGNIV SMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA
        GKQL+KGGSNQPS KQLQQ+VGLKPSLEDCLNGL LLC MHRSEY+LKES+VSALPELFWK RNH AQDLSSL QLLVDQPNI+KEEVEF+FDTILV EA
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA

SwissProt top hits

e value

%identity

Alignment

Q6NPG7 Uncharacterized protein At5g43822

7.4e-40

45.23

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  ++G+L  + GI +A++ +QM  L+    S+K  MEE    V + EK++RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLE
        G QL +  S++   +++++++G+KP + DCL GL +L  MH+SEY+LK SI+S L  L  K       DL++L  L+VDQPNI K+EV+ +FD I   E
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLE

Arabidopsis top hits

e value

%identity

Alignment

AT5G43822.1 Pentatricopeptide repeat (PPR) superfamily protein

5.3e-41

45.23

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  ++G+L  + GI +A++ +QM  L+    S+K  MEE    V + EK++RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLE
        G QL +  S++   +++++++G+KP + DCL GL +L  MH+SEY+LK SI+S L  L  K       DL++L  L+VDQPNI K+EV+ +FD I   E
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCCTC
CTCCATCATTGGGAGACTGCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGCATTGTAGAGGCGTTATTGGCGAAGCAGATGGAATCCTTGC
AACTTAGTTTCTCTTCCATTAAAAAGACAATGGAAGAACTTGGGAATATTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTCAAAGGCGGTTCTAAT
CAGCCATCAATAAAACAACTACAACAAAAAGTTGGTTTAAAACCCAGTCTTGAAGATTGTTTGAATGGTTTAATGCTTCTCTGCCACATGCACCGCTCTGAGTACAATCT
TAAAGAATCTATCGTCTCAGCGCTTCCAGAACTTTTCTGGAAAGCTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACATCAACTCTTGGTTGACCAACCTAACATTA
AGAAAGAGGAAGTTGAATTCGTCTTTGATACTATACTGGTTCTAGAAGCCTAG

mRNA sequence

Show/hide mRNA sequence

AGCTCACATCATCTTTTATTTCTATCACTTCCACTATTCTCTTGTGCAAAGCGGCAGCCACCAGTTTTCTCAAAATAACACCGGCGACCGTAACGAACTCCGGCCAGCGA
CCACTAACGGCGCCTTTGAAGCCCCACTAACAGCGACGCAAACTCCTTCCTGCAGCGGCGGTGCTCTATCCACGAACCACGACACTCAAATCTAACTACAGCGGCGCGAT
TCCTCTACTTTCTTCTCTGTATCGGTGGTGTTGTGACAGTCTAGATTTCAATCTATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAAT
GGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCCTCCTCCATCATTGGGAGACTGCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGT
CTGGCATGGATGGCATTGTAGAGGCGTTATTGGCGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCTTCCATTAAAAAGACAATGGAAGAACTTGGGAATATTGTCAAT
TCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTCAAAGGCGGTTCTAATCAGCCATCAATAAAACAACTACAACAAAAAGTTGGTTTAAAACCCAGTCTTGAAGA
TTGTTTGAATGGTTTAATGCTTCTCTGCCACATGCACCGCTCTGAGTACAATCTTAAAGAATCTATCGTCTCAGCGCTTCCAGAACTTTTCTGGAAAGCTAGGAATCATG
GAGCTCAAGACCTCAGCTCCTTACATCAACTCTTGGTTGACCAACCTAACATTAAGAAAGAGGAAGTTGAATTCGTCTTTGATACTATACTGGTTCTAGAAGCCTAGCTA
ATGTATGATACGATCAAACAACTCAACAACTTATGATTTCATCCGCATGACTAGCAACAAAATCTCATATACTTTCAATATCAACTATTGGAAGAGTTGAGGTAACCACA
AAACCAACTAGAAGATGAAACTTCAAGGATATCTCACCTGGTGGTTATTGTTAATAATGATCATTGCTTAGCAGATAAAAGCGCAATCAACCGTTCAAATGTAGATTCGA
TCTTCCATTGATGAACACGAAAAGGTAAAGAATTTACCTTGTGAGTTTGATACATTATAGCAATCTTAGTTTAAAATAGTATAGTATTTATCACTATTCTCCCCCTCCAC
AACAATATCAATTTAATATTCTTAGCGATTGTTGTTTTCTTTTGTGCCTTTTGGTATTTGGAGAGAGCGTGGTGTAAATGTGAAGCCTCTG

Protein sequence

Show/hide protein sequence

MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSN
QPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA

CSPI07G01820 (gene) of Cucumber (PI 183967) v1 genome