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CSPI07G01980 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G01980
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationChr7:1680243..1680615
RNA-Seq ExpressionCSPI07G01980
SyntenyCSPI07G01980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032726.1 drebrin-like [Cucumis melo var. makuwa]2.2e-0645.16Show/hide
Query:  LSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFINH----------PHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFEAQIEQL
        L S PK T E  ++  K KEA +E ++EV DE +IF F++H            +I+C S   EM F S+KQL DLELK +NANAN +A+I++L
Subjt:  LSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFINH----------PHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFEAQIEQL

KAA0054903.1 hypothetical protein E6C27_scaffold43052G00310 [Cucumis melo var. makuwa]4.4e-1048Show/hide
Query:  EKETISKEVGETHLSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFINH----------PHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFE
        +KE  SK  G+  L  LPK T +AL Q+ K KE V E +EE + EDY+F F++H           ++IQC   L EMH +S KQL+DLELKVDNANA+ +
Subjt:  EKETISKEVGETHLSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFINH----------PHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFE

KAE8646246.1 hypothetical protein Csa_023826, partial [Cucumis sativus]4.2e-2166.33Show/hide
Query:  EKETISKEVGETHLSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFINH----------PHMIQCHSMLPEMHFQSQKQLSDLELKVDNANAN
        EKET+SKEVGETHL SLP + VEA +Q+DKSKEA+KEK+ EV D+DYIFYFINH            MIQ  S L EM   SQKQLSDLELKVDNAN N
Subjt:  EKETISKEVGETHLSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFINH----------PHMIQCHSMLPEMHFQSQKQLSDLELKVDNANAN

KGN49653.1 hypothetical protein Csa_018510 [Cucumis sativus]3.8e-0639.83Show/hide
Query:  TISKEVGETHLSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFIN----------HPHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFEAQI
        T SK   +  LS +     E L +   +KEAV+E D    DEDY   F +              IQC S   EMHFQSQKQL D +LK+DN N + + QI
Subjt:  TISKEVGETHLSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFIN----------HPHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFEAQI

Query:  EQLSEKVTELVTQNEKCK
        E L  K+ EL+ Q ++ K
Subjt:  EQLSEKVTELVTQNEKCK

TYK07283.1 hypothetical protein E5676_scaffold606G001830 [Cucumis melo var. makuwa]1.5e-0541.94Show/hide
Query:  DKSKEAVKEKDEEVFDEDYIFYFIN----------HPHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFEAQIEQLSEKVTELVTQNEKCK
        ++ KEA + KDE+  DE+YIF FI+             +IQC S L +MH   QKQL D E+K+ N N + +AQIE L  ++ EL +QN++ K
Subjt:  DKSKEAVKEKDEEVFDEDYIFYFIN----------HPHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFEAQIEQLSEKVTELVTQNEKCK

TrEMBL top hitse value%identityAlignment
A0A0A0KJB9 Uncharacterized protein1.9e-0639.83Show/hide
Query:  TISKEVGETHLSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFIN----------HPHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFEAQI
        T SK   +  LS +     E L +   +KEAV+E D    DEDY   F +              IQC S   EMHFQSQKQL D +LK+DN N + + QI
Subjt:  TISKEVGETHLSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFIN----------HPHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFEAQI

Query:  EQLSEKVTELVTQNEKCK
        E L  K+ EL+ Q ++ K
Subjt:  EQLSEKVTELVTQNEKCK

A0A0A0LD97 Uncharacterized protein3.9e-1275.93Show/hide
Query:  EKETISKEVGETHLSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFINH
        E+ETIS+E GETHL SLPKE VEA  +DDK+KEA+KE DEEV D+DYIFYFINH
Subjt:  EKETISKEVGETHLSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFINH

A0A5A7SRQ1 Drebrin-like1.1e-0645.16Show/hide
Query:  LSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFINH----------PHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFEAQIEQL
        L S PK T E  ++  K KEA +E ++EV DE +IF F++H            +I+C S   EM F S+KQL DLELK +NANAN +A+I++L
Subjt:  LSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFINH----------PHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFEAQIEQL

A0A5D3C5U6 Uncharacterized protein7.1e-0641.94Show/hide
Query:  DKSKEAVKEKDEEVFDEDYIFYFIN----------HPHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFEAQIEQLSEKVTELVTQNEKCK
        ++ KEA + KDE+  DE+YIF FI+             +IQC S L +MH   QKQL D E+K+ N N + +AQIE L  ++ EL +QN++ K
Subjt:  DKSKEAVKEKDEEVFDEDYIFYFIN----------HPHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFEAQIEQLSEKVTELVTQNEKCK

A0A5D3DG66 Uncharacterized protein2.1e-1048Show/hide
Query:  EKETISKEVGETHLSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFINH----------PHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFE
        +KE  SK  G+  L  LPK T +AL Q+ K KE V E +EE + EDY+F F++H           ++IQC   L EMH +S KQL+DLELKVDNANA+ +
Subjt:  EKETISKEVGETHLSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFINH----------PHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGAAACAATCTCTAAGGAAGTTGGCGAGACACACCTCTCTTCACTGCCTAAAGAAACAGTAGAAGCTTTAATGCAAGACGATAAGAGTAAAGAAGCAGTAAA
GGAAAAGGACGAAGAAGTTTTTGACGAGGATTATATCTTCTATTTCATAAATCACCCACATATGATCCAGTGCCATAGTATGCTTCCAGAGATGCATTTTCAGAGTCAAA
AGCAGTTGAGTGACTTAGAACTTAAAGTAGACAATGCAAATGCAAATTTCGAGGCACAAATAGAACAACTCAGTGAGAAAGTCACAGAGCTTGTAACGCAGAATGAAAAG
TGTAAAGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAGAAACAATCTCTAAGGAAGTTGGCGAGACACACCTCTCTTCACTGCCTAAAGAAACAGTAGAAGCTTTAATGCAAGACGATAAGAGTAAAGAAGCAGTAAA
GGAAAAGGACGAAGAAGTTTTTGACGAGGATTATATCTTCTATTTCATAAATCACCCACATATGATCCAGTGCCATAGTATGCTTCCAGAGATGCATTTTCAGAGTCAAA
AGCAGTTGAGTGACTTAGAACTTAAAGTAGACAATGCAAATGCAAATTTCGAGGCACAAATAGAACAACTCAGTGAGAAAGTCACAGAGCTTGTAACGCAGAATGAAAAG
TGTAAAGCCTAA
Protein sequenceShow/hide protein sequence
MEKETISKEVGETHLSSLPKETVEALMQDDKSKEAVKEKDEEVFDEDYIFYFINHPHMIQCHSMLPEMHFQSQKQLSDLELKVDNANANFEAQIEQLSEKVTELVTQNEK
CKA