CuGenDBv2

Gene ID	CSPI07G02110
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Genome location	Chr7:1847162..1847467
RNA-Seq Expression	CSPI07G02110
Synteny	CSPI07G02110
Gene Ontology terms	GO:0007165 - signal transduction (biological process) GO:0003953 - NAD+ nucleosidase activity (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0045138.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

2.8e-16

82.76

Show/hide

Query:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD
        PKDFRPISLTTS YKIIAKTL+NRLK TLP++IS NQLAFVK RQI D ILMANE VD
Subjt:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD

KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

2.1e-16

82.76

Show/hide

Query:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD
        PKDFRPISLTTS YKIIAKTL+NRLK +LP +ISENQLAFVK RQI D ILMANE VD
Subjt:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD

TYK05718.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

2.8e-16

82.76

Show/hide

Query:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD
        PKDFRPISLTTS YKIIAKTL+NRLK TLP++IS NQLAFVK RQI D ILMANE VD
Subjt:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD

TYK05811.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

2.8e-16

81.03

Show/hide

Query:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD
        PKDFRPISLTTS YKIIAKTLANRL+ TLP++IS+NQLAFVK RQI D ILMANE +D
Subjt:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD

TYK11012.1 uncharacterized protein E5676_scaffold874G00540 [Cucumis melo var. makuwa]

1.1e-15

81.03

Show/hide

Query:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD
        PKDFRPISLTTS YKIIAKTL+NRLK TLP +IS NQLAF+K RQI D ILMANE VD
Subjt:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TQI1 LINE-1 retrotransposable element ORF2 protein

1.4e-16

82.76

Show/hide

Query:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD
        PKDFRPISLTTS YKIIAKTL+NRLK TLP++IS NQLAFVK RQI D ILMANE VD
Subjt:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD

A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein

1.0e-16

82.76

Show/hide

Query:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD
        PKDFRPISLTTS YKIIAKTL+NRLK +LP +ISENQLAFVK RQI D ILMANE VD
Subjt:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD

A0A5A7UV84 Reverse transcriptase domain-containing protein

5.2e-16

81.03

Show/hide

Query:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD
        PKDFRPISLTTS YKIIAKTL+NRLK TLP +IS NQLAF+K RQI D ILMANE VD
Subjt:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD

A0A5D3C1J0 LINE-1 retrotransposable element ORF2 protein

1.4e-16

81.03

Show/hide

Query:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD
        PKDFRPISLTTS YKIIAKTLANRL+ TLP++IS+NQLAFVK RQI D ILMANE +D
Subjt:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD

A0A5D3C3D0 LINE-1 retrotransposable element ORF2 protein

1.4e-16

82.76

Show/hide

Query:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD
        PKDFRPISLTTS YKIIAKTL+NRLK TLP++IS NQLAFVK RQI D ILMANE VD
Subjt:  PKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVD

SwissProt top hits

e value

%identity

Alignment

P14381 Transposon TX1 uncharacterized 149 kDa protein

2.6e-04

39.29

Show/hide

Query:  KDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVV
        K++RP+SL ++ YKI+AK ++ RLK  L E I  +Q   V GR I D + +  +++
Subjt:  KDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVV

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGTTTTTCAAGAGCCTTCCTTGCTCATGCAAAATAGAAAGAAAGGAATTTGTCCTTTCACTAGACAAATATTCAACTTCTTTGCTCTATTCTCAAATATTAAACCT
CAGTAACATGCCTAAAGATTTTAGGCCCATAAGCCTCACAACCTCCTTTTACAAGATCATAGCAAAGACCTTAGCTAACAGACTGAAGCCCACGTTGCCAGAGTCAATTT
CTGAGAATCAACTAGCCTTTGTCAAAGGTCGTCAGATAATTGACACCATTCTTATGGCTAATGAAGTGGTTGATTTGGAGAGCTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAFFKSLPCSCKIERKEFVLSLDKYSTSLLYSQILNLSNMPKDFRPISLTTSFYKIIAKTLANRLKPTLPESISENQLAFVKGRQIIDTILMANEVVDLES

CSPI07G02110 (gene) of Cucumber (PI 183967) v1 genome