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CSPI07G02140 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G02140
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationChr7:1874519..1874799
RNA-Seq ExpressionCSPI07G02140
SyntenyCSPI07G02140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060627.1 Reverse transcriptase, RNA-dependent DNA polymerase [Cucumis melo var. makuwa]3.2e-0564.81Show/hide
Query:  MVQNHENNDARQPGNSYPHNSNRSNGNSHSMEVA--TSAVTIVAEEKETNQHAK
        MVQN  NNDARQPGNSYPHNSN SNGN   +     T AV +VAEE E NQ  K
Subjt:  MVQNHENNDARQPGNSYPHNSNRSNGNSHSMEVA--TSAVTIVAEEKETNQHAK
TYK02246.1 uncharacterized protein E5676_scaffold18G00450 [Cucumis melo var. makuwa]3.2e-0564.81Show/hide
Query:  MVQNHENNDARQPGNSYPHNSNRSNGNSHSMEVA--TSAVTIVAEEKETNQHAK
        MVQN  NNDARQPGNSYPHNSN SNGN   +     T AV +VAEE E NQ  K
Subjt:  MVQNHENNDARQPGNSYPHNSNRSNGNSHSMEVA--TSAVTIVAEEKETNQHAK
TrEMBL top hitse value%identityAlignment
A0A5A7V1E0 Reverse transcriptase, RNA-dependent DNA polymerase1.6e-0564.81Show/hide
Query:  MVQNHENNDARQPGNSYPHNSNRSNGNSHSMEVA--TSAVTIVAEEKETNQHAK
        MVQN  NNDARQPGNSYPHNSN SNGN   +     T AV +VAEE E NQ  K
Subjt:  MVQNHENNDARQPGNSYPHNSNRSNGNSHSMEVA--TSAVTIVAEEKETNQHAK
A0A5D3BVJ1 Uncharacterized protein1.6e-0564.81Show/hide
Query:  MVQNHENNDARQPGNSYPHNSNRSNGNSHSMEVA--TSAVTIVAEEKETNQHAK
        MVQN  NNDARQPGNSYPHNSN SNGN   +     T AV +VAEE E NQ  K
Subjt:  MVQNHENNDARQPGNSYPHNSNRSNGNSHSMEVA--TSAVTIVAEEKETNQHAK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAAAACCATGAGAATAATGATGCTCGACAACCTGGAAACTCATATCCACACAATAGTAATCGCTCAAATGGAAATAGTCACAGCATGGAGGTAGCAACTTCGGC
AGTCACGATCGTGGCTGAGGAAAAGGAAACAAACCAACATGCCAAAGGGCACAATATTAACGCGGAAATTACTATTGCACCTCTTTTG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAAAACCATGAGAATAATGATGCTCGACAACCTGGAAACTCATATCCACACAATAGTAATCGCTCAAATGGAAATAGTCACAGCATGGAGGTAGCAACTTCGGC
AGTCACGATCGTGGCTGAGGAAAAGGAAACAAACCAACATGCCAAAGGGCACAATATTAACGCGGAAATTACTATTGCACCTCTTTTG
Protein sequenceShow/hide protein sequence
MVQNHENNDARQPGNSYPHNSNRSNGNSHSMEVATSAVTIVAEEKETNQHAKGHNINAEITIAPLL