CuGenDBv2

Gene ID	CSPI07G02160
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transposon TX1 uncharacterized 149 kDa protein
Genome location	Chr7:1905149..1906233
RNA-Seq Expression	CSPI07G02160
Synteny	CSPI07G02160
Gene Ontology terms	GO:0050789 - regulation of biological process (biological process)
InterPro domains	IPR036691 - Endonuclease/exonuclease/phosphatase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

RVW51134.1 SWI/SNF complex subunit SWI3C [Vitis vinifera]

1.5e-77

42.77

Show/hide

Query:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT
        +EL  L+GL    WCVGGDFNV+R ++EK   +R T +M RF+  I E+ L+D P RN  F+WS   V P   ++DRFL +  W  FF +   E LPR T
Subjt:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT

Query:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE
        SDH PI L+     WGPTPFRFEN WL H  F +   +WW     +GW    FM KLK +K+ LK WN   FG++  +K+ ++  +   + +E+   LN 
Subjt:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE

Query:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW
        E V ER   R  L DL++KE+  W QKS+  W++EG+ NS FFHR  + R+S+  I SL+S  G+TL   + I +EI++FF  LY       +  +G++W
Subjt:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW

Query:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT
          +S + +  L+ PF+E+E+R AVF L   K+PGPDG T
Subjt:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT

RVW54885.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]

1.5e-77

42.77

Show/hide

Query:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT
        +EL  L+GL    WCVGGDFNV+R + EK   +R T +M RF+  I E+ L+D P RN  F+WS   V P   ++DRFL +  W  FF +   E LPR T
Subjt:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT

Query:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE
        SDH PI L+     WGPTPFRFEN WL H  F +   +WW     +GW    FM KLK +K+ LK WN   FG++  +K+ ++  +   + +E+   LN 
Subjt:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE

Query:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW
        E V ER   R  L DL++KE+  W QKS+  W++EG+ NS FFHR  + RKS+  I SL+S  G+TL   + I +EI++FF  LY       +  +G++W
Subjt:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW

Query:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT
          +S + +  L+ PF+E+E+R  VF L   K+PGPDG T
Subjt:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT

RVW64408.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]

5.1e-78

42.77

Show/hide

Query:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT
        +EL  LYGL    WCVGGDFNV+R ++EK   TR T +M  F+  I E+ L+D P RN  F+WS     P   ++DRFL +  W  FF +   E LPR T
Subjt:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT

Query:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE
        SDH PI L+     WGPTPFRFEN WL H  F +    WW     +GW    FM KLK +K+ LK WN  TFG++  +K+ ++  ++  + +E+   LN 
Subjt:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE

Query:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW
        + V ER   R  L D+++KE+  W QKS+  W++EG+ NS FFHR  + R+S+  I SL+S  G+TL   ++I +EI++FF  LY   +   +  +G++W
Subjt:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW

Query:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT
          +S +    L+ PFTE+E+R AVF L   K+PGPDG T
Subjt:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT

RVW70235.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]

1.5e-77

40.41

Show/hide

Query:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT
        +ELS + GL +  WCVGGDFNV+R  +EK  G+R T SM  F++ I + +L+D+P R+  F+WS   V P   ++DRFL +  W + F +     LPR T
Subjt:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT

Query:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE
        SDH+PI+L+     WGPTPFRFEN WL H  F +N   WW   + +GW    FM KL+ +KA LK WNK +FG +  +K+ ++  + +F+SLE+   L+ 
Subjt:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE

Query:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW
        E + +R   +G L +LI++E+  W QK++  W++EG+ NS FFH+  + R+++  I  L + +G+ +   + I +EIL +F  LY +     +  +GL+W
Subjt:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW

Query:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT
          +S + +  LE+PFTE+EI +A+F +   K+PGPDG T
Subjt:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT

RVX13544.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]

1.5e-77

40.41

Show/hide

Query:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT
        +ELS + GL +  WCVGGDFNV+R  +EK  G+R T SM  F++ I + +L+D+P R+  F+WS   V P   ++DRFL +  W + F +     LPR T
Subjt:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT

Query:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE
        SDH+PI+L+     WGPTPFRFEN WL H  F +N   WW   + +GW    FM KL+ +KA LK WNK +FG +  +K+ ++  + +F+SLE+   L+ 
Subjt:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE

Query:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW
        E + +R   +G L +LI++E+  W QK++  W++EG+ NS FFH+  + R+++  I  L + +G+ +   + I +EIL +F  LY +     +  +GL+W
Subjt:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW

Query:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT
          +S + +  LE+PFTE+EI +A+F +   K+PGPDG T
Subjt:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT

TrEMBL top hits

e value

%identity

Alignment

A0A438F4H2 Transposon TX1 uncharacterized 149 kDa protein

7.2e-78

42.77

Show/hide

Query:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT
        +EL  L+GL    WCVGGDFNV+R + EK   +R T +M RF+  I E+ L+D P RN  F+WS   V P   ++DRFL +  W  FF +   E LPR T
Subjt:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT

Query:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE
        SDH PI L+     WGPTPFRFEN WL H  F +   +WW     +GW    FM KLK +K+ LK WN   FG++  +K+ ++  +   + +E+   LN 
Subjt:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE

Query:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW
        E V ER   R  L DL++KE+  W QKS+  W++EG+ NS FFHR  + RKS+  I SL+S  G+TL   + I +EI++FF  LY       +  +G++W
Subjt:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW

Query:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT
          +S + +  L+ PF+E+E+R  VF L   K+PGPDG T
Subjt:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT

A0A438FWU5 LINE-1 retrotransposable element ORF2 protein

2.5e-78

42.77

Show/hide

Query:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT
        +EL  LYGL    WCVGGDFNV+R ++EK   TR T +M  F+  I E+ L+D P RN  F+WS     P   ++DRFL +  W  FF +   E LPR T
Subjt:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT

Query:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE
        SDH PI L+     WGPTPFRFEN WL H  F +    WW     +GW    FM KLK +K+ LK WN  TFG++  +K+ ++  ++  + +E+   LN 
Subjt:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE

Query:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW
        + V ER   R  L D+++KE+  W QKS+  W++EG+ NS FFHR  + R+S+  I SL+S  G+TL   ++I +EI++FF  LY   +   +  +G++W
Subjt:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW

Query:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT
          +S +    L+ PFTE+E+R AVF L   K+PGPDG T
Subjt:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT

A0A438GDE7 LINE-1 retrotransposable element ORF2 protein

7.2e-78

40.41

Show/hide

Query:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT
        +ELS + GL +  WCVGGDFNV+R  +EK  G+R T SM  F++ I + +L+D+P R+  F+WS   V P   ++DRFL +  W + F +     LPR T
Subjt:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT

Query:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE
        SDH+PI+L+     WGPTPFRFEN WL H  F +N   WW   + +GW    FM KL+ +KA LK WNK +FG +  +K+ ++  + +F+SLE+   L+ 
Subjt:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE

Query:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW
        E + +R   +G L +LI++E+  W QK++  W++EG+ NS FFH+  + R+++  I  L + +G+ +   + I +EIL +F  LY +     +  +GL+W
Subjt:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW

Query:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT
          +S + +  LE+PFTE+EI +A+F +   K+PGPDG T
Subjt:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT

A0A438JX47 LINE-1 retrotransposable element ORF2 protein

7.2e-78

40.41

Show/hide

Query:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT
        +ELS + GL +  WCVGGDFNV+R  +EK  G+R T SM  F++ I + +L+D+P R+  F+WS   V P   ++DRFL +  W + F +     LPR T
Subjt:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT

Query:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE
        SDH+PI+L+     WGPTPFRFEN WL H  F +N   WW   + +GW    FM KL+ +KA LK WNK +FG +  +K+ ++  + +F+SLE+   L+ 
Subjt:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE

Query:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW
        E + +R   +G L +LI++E+  W QK++  W++EG+ NS FFH+  + R+++  I  L + +G+ +   + I +EIL +F  LY +     +  +GL+W
Subjt:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW

Query:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT
          +S + +  LE+PFTE+EI +A+F +   K+PGPDG T
Subjt:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT

A5CAA2 Reverse transcriptase domain-containing protein

7.2e-78

40.41

Show/hide

Query:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT
        +ELS + GL +  WCVGGDFNV+R  +EK  G+R T SM  F++ I + +L+D+P R+  F+WS   V P   ++DRFL +  W + F +     LPR T
Subjt:  MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTT

Query:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE
        SDH+PI+L+     WGPTPFRFEN WL H  F +N   WW   + +GW    FM KL+ +KA LK WNK +FG +  +K+ ++  + +F+SLE+   L+ 
Subjt:  SDHFPIILKMGAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNE

Query:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW
        E + +R   +G L +LI++E+  W QK++  W++EG+ NS FFH+  + R+++  I  L + +G+ +   + I +EIL +F  LY +     +  +GL+W
Subjt:  ENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNW

Query:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT
          +S + +  LE+PFTE+EI +A+F +   K+PGPDG T
Subjt:  RGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMT

SwissProt top hits

e value

%identity

Alignment

O00370 LINE-1 retrotransposable element ORF2 protein

9.9e-08

20.38

Show/hide

Query:  LSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDI----PFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPR
        LS L    + +  + GDFN    + ++S+  +  +     N+ + +TDL+DI      ++  +++  S      SKID  + +K  +   +   +  +  
Subjt:  LSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDI----PFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPR

Query:  TTSDHFPIILKM--------GAHSWGPTPFRFENAWLDHH------LFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLID
          SDH  I L++         + +W        + W+ +       +F +  EN   +   + W  F  +   +G    L ++ ++       Q++S ID
Subjt:  TTSDHFPIILKM--------GAHSWGPTPFRFENAWLDHH------LFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLID

Query:  KINS-FESLEESSCLNEENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFH-----------RWVSARKSKSIISSLVSTDGKTLVTEKE
         + S  + LE+     +E    + + R  +  +  + +++ TQK+    L++  E+ S+F            R +  ++ K+ I ++ +  G       E
Subjt:  KINS-FESLEESSCLNEENVKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFH-----------RWVSARKSKSIISSLVSTDGKTLVTEKE

Query:  IVDEILSFFSMLYGTRISS----PFICDGLNWRGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMTGD
        I   I  ++  LY  ++ +        D      L+ ++  SL  P T  EI   +  L   KSPGPDG T +
Subjt:  IVDEILSFFSMLYGTRISS----PFICDGLNWRGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMTGD

P11369 LINE-1 retrotransposable element ORF2 protein

1.9e-06

20.99

Show/hide

Query:  GDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDI-----PFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTTSDH--FPIILKM
        GDFN      ++S   +  R  ++   ++++ DL DI     P   G   +  S      SKID  +  K  +  ++  ++E +P   SDH    +I   
Subjt:  GDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDI-----PFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTTSDH--FPIILKM

Query:  GAHSWGPT-PFRFENAWLDHHLFLKNVEN------WWGSLEADGWP-IFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNEEN
          ++  PT  ++  N  L+  L  + ++        +   EA  +P ++  M+     K I  S +K+      +   SL   + + E  E +S      
Subjt:  GAHSWGPT-PFRFENAWLDHHLFLKNVEN------WWGSLEADGWP-IFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNEEN

Query:  VKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISS----PFICDGL
         +E    RG +  +  +       +++  +  +  +      R     + K +I+ + +  G      +EI + I SF+  LY T++ +        D  
Subjt:  VKERENSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISS----PFICDGL

Query:  NWRGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMTGD
            L+    + L +P + KEI   +  L   KSPGPDG + +
Subjt:  NWRGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMTGD

Arabidopsis top hits

e value

%identity

Alignment

AT1G43760.1 DNAse I-like superfamily protein

4.8e-26

26.8

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Query:  GDFNVVRWLNEKSSGTR---PTRSMLRFNNLIEETDLVDIPFRNGRFSWS-RSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTTSDHFP-IILKMGA
        GDF+ +   ++  S  +   P R +  F N + ++DLVDIP R   ++WS      P   K+DR +    W   F            SDH P II+    
Subjt:  GDFNVVRWLNEKSSGTR---PTRSMLRFNNLIEETDLVDIPFRNGRFSWS-RSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTTSDHFP-IILKMGA

Query:  HSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESL-----EESSCLNEENVKERE
               FR+ +    H  FL ++   W      G  +FS  E LK  K   K  N++ FGNI  + +  +D + S +S       +S    E   +++ 
Subjt:  HSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESL-----EESSCLNEENVKERE

Query:  NSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGT-----------RISS--PFI
        N   A L      +  + QKS+  WL++G+ N+ FFH+ + A ++K++I  L   D   +    ++ + I+++++ L G+           RI    PF 
Subjt:  NSRGALLDLIVKEQKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGT-----------RISS--PFI

Query:  CDGLNWRGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMTGD
        C+           ++ L A  ++KEI  AVF +   K+PGPD  T +
Subjt:  CDGLNWRGLSLQDSNSLEAPFTEKEIREAVFDLGCLKSPGPDGMTGD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAGCTTTCTAGCTTATATGGCTTATGCAACGATAATTGGTGCGTAGGGGGTGACTTCAATGTAGTCAGATGGTTAAATGAGAAGAGCTCTGGCACTCGCCCGACTAG
AAGTATGCTTCGATTTAACAACTTGATTGAGGAGACGGATCTGGTGGATATTCCCTTCCGAAACGGAAGGTTCTCTTGGTCCCGATCAGGGGTTAGGCCCGCTGCTTCAA
AGATCGACAGATTCCTTCTAACCAAGCCTTGGATGGAGTTCTTTAGAGAAGTAAGTGTGGAAAGACTTCCTCGTACCACATCGGATCACTTTCCGATAATTTTAAAAATG
GGGGCTCATTCCTGGGGTCCCACACCTTTTAGATTTGAAAATGCTTGGCTGGATCATCATCTCTTCCTTAAAAATGTTGAGAACTGGTGGGGCAGTCTGGAGGCTGATGG
CTGGCCTATATTCTCTTTCATGGAAAAGCTAAAAGGTCTGAAAGCCATCCTAAAAAGCTGGAATAAGGAGACTTTTGGTAACATCTTCTCCCAAAAACAGTCGCTGATTG
ATAAGATTAACTCTTTTGAGTCACTTGAAGAGTCGAGCTGCCTCAACGAGGAAAATGTGAAGGAAAGAGAAAACAGTAGAGGGGCCCTGCTTGATCTGATTGTGAAAGAA
CAGAAGCTGTGGACGCAGAAGTCGAAGTTTCACTGGCTTAGAGAGGGAGAGGAAAACTCAAGCTTCTTCCACAGATGGGTTTCAGCTCGTAAAAGTAAAAGTATTATTTC
TTCCTTGGTCAGTACAGATGGGAAGACTCTTGTCACTGAGAAGGAGATTGTGGATGAGATCCTCAGCTTCTTTTCAATGTTATATGGCACAAGGATCTCCTCGCCGTTTA
TTTGTGACGGTCTTAATTGGAGAGGCCTTAGCTTACAGGATTCGAATTCACTTGAGGCTCCCTTTACCGAAAAAGAAATTAGAGAAGCTGTCTTTGATTTGGGTTGTCTC
AAATCCCCTGGCCCTGATGGCATGACTGGTGACCCGATCTTGTAA

mRNA sequence

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ACGTAGAGAACAATTCTGGATGGAGCTTTCTAGCTTATATGGCTTATGCAACGATAATTGGTGCGTAGGGGGTGACTTCAATGTAGTCAGATGGTTAAATGAGAAGAGCT
CTGGCACTCGCCCGACTAGAAGTATGCTTCGATTTAACAACTTGATTGAGGAGACGGATCTGGTGGATATTCCCTTCCGAAACGGAAGGTTCTCTTGGTCCCGATCAGGG
GTTAGGCCCGCTGCTTCAAAGATCGACAGATTCCTTCTAACCAAGCCTTGGATGGAGTTCTTTAGAGAAGTAAGTGTGGAAAGACTTCCTCGTACCACATCGGATCACTT
TCCGATAATTTTAAAAATGGGGGCTCATTCCTGGGGTCCCACACCTTTTAGATTTGAAAATGCTTGGCTGGATCATCATCTCTTCCTTAAAAATGTTGAGAACTGGTGGG
GCAGTCTGGAGGCTGATGGCTGGCCTATATTCTCTTTCATGGAAAAGCTAAAAGGTCTGAAAGCCATCCTAAAAAGCTGGAATAAGGAGACTTTTGGTAACATCTTCTCC
CAAAAACAGTCGCTGATTGATAAGATTAACTCTTTTGAGTCACTTGAAGAGTCGAGCTGCCTCAACGAGGAAAATGTGAAGGAAAGAGAAAACAGTAGAGGGGCCCTGCT
TGATCTGATTGTGAAAGAACAGAAGCTGTGGACGCAGAAGTCGAAGTTTCACTGGCTTAGAGAGGGAGAGGAAAACTCAAGCTTCTTCCACAGATGGGTTTCAGCTCGTA
AAAGTAAAAGTATTATTTCTTCCTTGGTCAGTACAGATGGGAAGACTCTTGTCACTGAGAAGGAGATTGTGGATGAGATCCTCAGCTTCTTTTCAATGTTATATGGCACA
AGGATCTCCTCGCCGTTTATTTGTGACGGTCTTAATTGGAGAGGCCTTAGCTTACAGGATTCGAATTCACTTGAGGCTCCCTTTACCGAAAAAGAAATTAGAGAAGCTGT
CTTTGATTTGGGTTGTCTCAAATCCCCTGGCCCTGATGGCATGACTGGTGACCCGATCTTGTAA

Protein sequence

Show/hide protein sequence

MELSSLYGLCNDNWCVGGDFNVVRWLNEKSSGTRPTRSMLRFNNLIEETDLVDIPFRNGRFSWSRSGVRPAASKIDRFLLTKPWMEFFREVSVERLPRTTSDHFPIILKM
GAHSWGPTPFRFENAWLDHHLFLKNVENWWGSLEADGWPIFSFMEKLKGLKAILKSWNKETFGNIFSQKQSLIDKINSFESLEESSCLNEENVKERENSRGALLDLIVKE
QKLWTQKSKFHWLREGEENSSFFHRWVSARKSKSIISSLVSTDGKTLVTEKEIVDEILSFFSMLYGTRISSPFICDGLNWRGLSLQDSNSLEAPFTEKEIREAVFDLGCL
KSPGPDGMTGDPIL

CSPI07G02160 (gene) of Cucumber (PI 183967) v1 genome