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CSPI07G02390 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G02390
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-type domain-containing protein
Genome locationChr7:2054829..2056527
RNA-Seq ExpressionCSPI07G02390
SyntenyCSPI07G02390
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0030121 - AP-1 adaptor complex (cellular component)
GO:0035615 - clathrin adaptor activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050549.1 AP-1 complex subunit sigma-2 [Cucumis melo var. makuwa]2.3e-3088.89Show/hide
Query:  MSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLV
        MSMAT+VFLTCVWIPLSQLKAAI SMFDILSGRTC MLTT  +PCEVKLLVCRFEELQR VGSEEEICS+CLTEFTREHL+
Subjt:  MSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLV

KAE8645705.1 hypothetical protein Csa_020389 [Cucumis sativus]4.8e-5298.2Show/hide
Query:  RNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSV
        RNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAI SMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSV
Subjt:  RNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSV

Query:  CLTEFTREHLV
        CLTEFTREHL+
Subjt:  CLTEFTREHLV

KAG4398155.1 hypothetical protein GLYMA_10G289100v4 [Glycine max]6.8e-2249.22Show/hide
Query:  RMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQ--RAVGSEEEICSVCLTEFTREHLVSQLHRC
        RM    +C+  + + TIVF TC+ IPL QLK A+ SM  + S  T  M      P    L V RFE+L+       +EEICS+CL E+  E  VS+L RC
Subjt:  RMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQ--RAVGSEEEICSVCLTEFTREHLVSQLHRC

Query:  SHVFHLECIESWLQRNQFTCPLCRSFIF
         HVFHL CIE W+ RNQF+CPLCRSF+F
Subjt:  SHVFHLECIESWLQRNQFTCPLCRSFIF

TKY50666.1 RING-H2 finger protein ATL18 [Spatholobus suberectus]8.1e-2348.89Show/hide
Query:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDIL----SGRTCQMLTTASLPCEVKLLVCRFEELQ--RAVGSE----EEICSVCLTEFTREHL
        MI + +CR  + + TIVF TC+ IP  QLK A++SMF  L    S  T  M      P    L V R+E+L+    VG E    +EICS+CL E+  E  
Subjt:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDIL----SGRTCQMLTTASLPCEVKLLVCRFEELQ--RAVGSE----EEICSVCLTEFTREHL

Query:  VSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIF
        VS+L RC HVFHL CIE W+ RNQF+CPLCRSF+F
Subjt:  VSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIF

XP_022762435.1 RING-H2 finger protein ATL18-like [Durio zibethinus]1.6e-2344.93Show/hide
Query:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDIL-----SGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSE--------EEICSVCLTEFTR
        MI +      +S A ++F TCVWIP  QLK A+L +   +     +  +CQ++        V L V RFE+L+ + GS         EE+CS+CL EF +
Subjt:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDIL-----SGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSE--------EEICSVCLTEFTR

Query:  EHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIF
        E +VSQLH+C H+FH+ CIE WL R+QFTCPLCRSF+F
Subjt:  EHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIF

TrEMBL top hitse value%identityAlignment
A0A0A0K513 RING-type domain-containing protein8.3e-8299.36Show/hide
Query:  MRKKSHVARNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVG
        MRKKSHVARNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAI SMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVG
Subjt:  MRKKSHVARNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVG

Query:  SEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQPL
        SEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQPL
Subjt:  SEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQPL

A0A0D2SLB9 RING-type domain-containing protein5.6e-2242.64Show/hide
Query:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVG----SEEEICSVCLTEFTREHLVSQLHR
        MI +         A ++F TCVWIP  Q K  +LS+   +  R+C  +        V L V RFE+L+ + G    +EEE+CS+CL EF  +  VSQ+ +
Subjt:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVG----SEEEICSVCLTEFTREHLVSQLHR

Query:  CSHVFHLECIESWLQRNQFTCPLCRSFIF
        C HVFH+ CIE W++R  FTCPLCRS +F
Subjt:  CSHVFHLECIESWLQRNQFTCPLCRSFIF

A0A5D2M180 RING-type domain-containing protein5.6e-2242.64Show/hide
Query:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVG----SEEEICSVCLTEFTREHLVSQLHR
        MI +         A ++F TCVWIP  Q K  +LS+   +  R+C  +        V L V RFE+L+ + G    +EEE+CS+CL EF  +  VSQ+ +
Subjt:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVG----SEEEICSVCLTEFTREHLVSQLHR

Query:  CSHVFHLECIESWLQRNQFTCPLCRSFIF
        C HVFH+ CIE W++R  FTCPLCRS +F
Subjt:  CSHVFHLECIESWLQRNQFTCPLCRSFIF

A0A5D3D5G1 AP-1 complex subunit sigma-21.1e-3088.89Show/hide
Query:  MSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLV
        MSMAT+VFLTCVWIPLSQLKAAI SMFDILSGRTC MLTT  +PCEVKLLVCRFEELQR VGSEEEICS+CLTEFTREHL+
Subjt:  MSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLV

A0A6P6AC29 RING-H2 finger protein ATL18-like7.9e-2444.93Show/hide
Query:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDIL-----SGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSE--------EEICSVCLTEFTR
        MI +      +S A ++F TCVWIP  QLK A+L +   +     +  +CQ++        V L V RFE+L+ + GS         EE+CS+CL EF +
Subjt:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDIL-----SGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSE--------EEICSVCLTEFTR

Query:  EHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIF
        E +VSQLH+C H+FH+ CIE WL R+QFTCPLCRSF+F
Subjt:  EHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIF

SwissProt top hitse value%identityAlignment
Q9FHG8 Putative RING-H2 finger protein ATL502.0e-0859.09Show/hide
Query:  CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCR
        C+VCL EFT E  +  L +CSH FH+ECI++WL  N  TCPLCR
Subjt:  CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCR

Q9FL07 RING-H2 finger protein ATL461.4e-0954Show/hide
Query:  CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQP
        C+VCL EF+ +  +  L  CSH FHL CI++WLQ N  TCPLCR  +F P
Subjt:  CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQP

Q9SUS5 E3 ubiquitin-protein ligase RHA1B3.4e-0838.67Show/hide
Query:  TTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWL-QRNQFTCPLCRS
        T+A+L  E+ + V RF +L   +   E+ C+VCL++F  +  + QL +C HVFH  C++ W+   N+ TCP+CR+
Subjt:  TTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWL-QRNQFTCPLCRS

Q9SZL4 RING-H2 finger protein ATL181.1e-1439.37Show/hide
Query:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHV
        MI M   R  +  A IVF TCV IPL +LK          +G        A       L+   F + ++    EE  C +CL EF  E  V+ L RC+H+
Subjt:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHV

Query:  FHLECIESWLQRNQFTCPLCRSFIFQP
        FH+ CIE WL R   TCPLCRSF+  P
Subjt:  FHLECIESWLQRNQFTCPLCRSFIFQP

Q9XF92 Brassinosteroid-responsive RING protein 11.4e-0943.75Show/hide
Query:  LLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRS
        L V +FEEL  +     E C+VCL EF  E  +  L  C H+FH  C++ W+  +Q TCPLCR+
Subjt:  LLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRS

Arabidopsis top hitse value%identityAlignment
AT1G24580.1 RING/U-box superfamily protein4.9e-1032.11Show/hide
Query:  IPLSQLKAAILSMFDILSGRTCQMLTTASLP----CEVKLLVCRFEELQRAVGSEEE----ICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQF
        + ++ LK  + S+F I++  T   +     P       ++ + +F+ L   +  EEE     C VCL  F  E  VS+L  C H FH  C+++W   N  
Subjt:  IPLSQLKAAILSMFDILSGRTCQMLTTASLP----CEVKLLVCRFEELQRAVGSEEE----ICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQF

Query:  TCPLCRSFI
        TCPLCRS +
Subjt:  TCPLCRSFI

AT3G61460.1 brassinosteroid-responsive RING-H29.9e-1143.75Show/hide
Query:  LLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRS
        L V +FEEL  +     E C+VCL EF  E  +  L  C H+FH  C++ W+  +Q TCPLCR+
Subjt:  LLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRS

AT4G38140.1 RING/U-box superfamily protein7.8e-1639.37Show/hide
Query:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHV
        MI M   R  +  A IVF TCV IPL +LK          +G        A       L+   F + ++    EE  C +CL EF  E  V+ L RC+H+
Subjt:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHV

Query:  FHLECIESWLQRNQFTCPLCRSFIFQP
        FH+ CIE WL R   TCPLCRSF+  P
Subjt:  FHLECIESWLQRNQFTCPLCRSFIFQP

AT5G40250.1 RING/U-box superfamily protein9.9e-1154Show/hide
Query:  CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQP
        C+VCL EF+ +  +  L  CSH FHL CI++WLQ N  TCPLCR  +F P
Subjt:  CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQP

AT5G57750.1 RING/U-box superfamily protein1.4e-0959.09Show/hide
Query:  CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCR
        C+VCL EFT E  +  L +CSH FH+ECI++WL  N  TCPLCR
Subjt:  CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAGAAATCCCACGTTGCAAGAAACCAACAAAAAGGAGAAATAGAAGAAGAAGCTGCTGGTCTTGTGTGTTTTGGCAGAATGATAGGCATGGCATTATGCAGAGG
TTCAATGTCCATGGCCACCATTGTCTTCTTAACTTGTGTGTGGATCCCTTTGAGCCAACTGAAGGCAGCCATTTTGAGCATGTTCGACATTCTATCGGGTCGAACGTGTC
AGATGCTCACGACAGCGTCGCTGCCATGTGAGGTAAAACTTCTGGTTTGTAGGTTCGAAGAGCTGCAGCGTGCAGTTGGATCAGAGGAGGAAATTTGCTCTGTTTGCTTG
ACGGAGTTCACCAGAGAGCATTTGGTGAGCCAATTGCATAGATGTAGCCATGTTTTCCACCTAGAATGTATTGAGAGTTGGCTACAAAGAAACCAATTTACCTGCCCTCT
CTGCAGATCCTTCATCTTCCAACCATTG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAAGAAATCCCACGTTGCAAGAAACCAACAAAAAGGAGAAATAGAAGAAGAAGCTGCTGGTCTTGTGTGTTTTGGCAGAATGATAGGCATGGCATTATGCAGAGG
TTCAATGTCCATGGCCACCATTGTCTTCTTAACTTGTGTGTGGATCCCTTTGAGCCAACTGAAGGCAGCCATTTTGAGCATGTTCGACATTCTATCGGGTCGAACGTGTC
AGATGCTCACGACAGCGTCGCTGCCATGTGAGGTAAAACTTCTGGTTTGTAGGTTCGAAGAGCTGCAGCGTGCAGTTGGATCAGAGGAGGAAATTTGCTCTGTTTGCTTG
ACGGAGTTCACCAGAGAGCATTTGGTGAGCCAATTGCATAGATGTAGCCATGTTTTCCACCTAGAATGTATTGAGAGTTGGCTACAAAGAAACCAATTTACCTGCCCTCT
CTGCAGATCCTTCATCTTCCAACCATTG
Protein sequenceShow/hide protein sequence
MRKKSHVARNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAILSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCL
TEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQPL