; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G02960 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G02960
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtochlorophyllide reductase
Genome locationChr7:2415037..2417731
RNA-Seq ExpressionCSPI07G02960
SyntenyCSPI07G02960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059153.1 uncharacterized protein E6C27_scaffold430G00710 [Cucumis melo var. makuwa]3.7e-4794.23Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGA-VVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQS
        MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRV A VVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLM S
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGA-VVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQS

Query:  NLWR
        +  R
Subjt:  NLWR

KAG6572248.1 hypothetical protein SDJN03_28976, partial [Cucurbita argyrosperma subsp. sororia]2.1e-4285.71Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMY--GGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQ
        MWRLAAAVRRNLHNIRKSPRVADESMY  GGG DGGGR   V+DG+RR+GNSYGFSMIY+LLRTPFS+LSCFSQPHVNGVDGMWVSGEFPRISEVNHLM 
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMY--GGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQ

Query:  SNLWR
        S+  R
Subjt:  SNLWR

XP_008455515.1 PREDICTED: uncharacterized protein LOC103495667 [Cucumis melo]5.3e-6298.36Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGA-VVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQS
        MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRV A VVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQS
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGA-VVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQS

Query:  NLWRKVKRDKWENSGMGDQEND
        NLWRKVKRDKWENSGMGDQEND
Subjt:  NLWRKVKRDKWENSGMGDQEND

XP_031744820.1 uncharacterized protein LOC101211016 [Cucumis sativus]3.0e-4996.12Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSN
        MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLM S+
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSN

Query:  LWR
          R
Subjt:  LWR

XP_038888385.1 uncharacterized protein LOC120078235 [Benincasa hispida]8.2e-4791.59Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMY----GGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHL
        MWRLAAAVRRNLHNIRKSPRVADESMY    GGGVDGGGRV AVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHL
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMY----GGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHL

Query:  MQSNLWR
        M S+  R
Subjt:  MQSNLWR

TrEMBL top hitse value%identityAlignment
A0A0A0K391 Uncharacterized protein1.9e-49100Show/hide
Query:  MYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWRKVKRDKWENSGMGDQEND
        MYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWRKVKRDKWENSGMGDQEND
Subjt:  MYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWRKVKRDKWENSGMGDQEND

A0A1S3C134 uncharacterized protein LOC1034956672.6e-6298.36Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGA-VVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQS
        MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRV A VVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQS
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGA-VVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQS

Query:  NLWRKVKRDKWENSGMGDQEND
        NLWRKVKRDKWENSGMGDQEND
Subjt:  NLWRKVKRDKWENSGMGDQEND

A0A5D3BTM8 Uncharacterized protein1.8e-4794.23Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGA-VVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQS
        MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRV A VVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLM S
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGA-VVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQS

Query:  NLWR
        +  R
Subjt:  NLWR

A0A6J1C6U0 uncharacterized protein LOC1110079081.3e-3778.64Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSN
        MWRLAA +RRNLHNIRKSPRVADESMYGGG   GG  G V + DRR GNSYGFSMIYS+LRTPFS+L CFSQPHVNG DG+WVSGEF RISEVNHLM S+
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSN

Query:  LWR
          R
Subjt:  LWR

A0A6J1HZK3 uncharacterized protein LOC1114683528.5e-4284.76Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMY--GGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQ
        MWRLAAAVRRNLHNIRKSPRVADESMY  GGG DGG     V+DG+RREGNSYGFSMIY+LLRTPFS+LSCFSQPHVNGVDGMWVSGEFPRISEVNHLM 
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMY--GGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQ

Query:  SNLWR
        S+  R
Subjt:  SNLWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04795.1 unknown protein9.4e-1745.36Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLM
        M ++ + +RRNL N+RKSPRVADES               V+GD   GN         +++ P SI+SCFS P V+  DG+WVSG++ R+SEVNHLM
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLM

AT5G35732.1 unknown protein3.5e-1948.54Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSN
        M ++ + +RRNL N+RKSPRVAD++       G G  G V +G RR+    GF+ +  ++R PFSI+SCF+ P V+G DG+WVSG++  ISEVNHLM S+
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSN

Query:  LWR
          R
Subjt:  LWR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCGGTTGGCGGCGGCAGTTAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACGGCGGCGGAGTTGACGGTGGCGGAAGGGT
GGGGGCGGTGGTGGACGGTGACCGAAGAGAAGGTAATTCATATGGGTTTTCTATGATTTACAGCCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTTTCTCAACCAC
ACGTTAATGGGGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGCAATCAAACCTTTGGAGAAAAGTTAAAAGGGATAAGTGG
GAAAACAGTGGAATGGGAGACCAAGAAAATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCGGTTGGCGGCGGCAGTTAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACGGCGGCGGAGTTGACGGTGGCGGAAGGGT
GGGGGCGGTGGTGGACGGTGACCGAAGAGAAGGTAATTCATATGGGTTTTCTATGATTTACAGCCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTTTCTCAACCAC
ACGTTAATGGGGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGCAATCAAACCTTTGGAGAAAAGTTAAAAGGGATAAGTGG
GAAAACAGTGGAATGGGAGACCAAGAAAATGATTGA
Protein sequenceShow/hide protein sequence
MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWRKVKRDKW
ENSGMGDQEND