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CSPI07G03100 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G03100
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPathogen-induced protein CuPi1
Genome locationChr7:2510020..2510769
RNA-Seq ExpressionCSPI07G03100
SyntenyCSPI07G03100
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589129.1 hypothetical protein SDJN03_17694, partial [Cucurbita argyrosperma subsp. sororia]6.6e-0644.05Show/hide
Query:  GRGYSLLAFFFFFVLFISSEVTAARKLKMHQNN-----EKGIVYLTPRTAIRNKPICDGSGPYSRCIPGSKPPKEKCNPYVRGC
        G+G  LLAF  FF LF SSE+ AARKL +  NN     E    ++TPRT   ++P C  + PY  C P  +PP   C+PY + C
Subjt:  GRGYSLLAFFFFFVLFISSEVTAARKLKMHQNN-----EKGIVYLTPRTAIRNKPICDGSGPYSRCIPGSKPPKEKCNPYVRGC
XP_004144528.1 uncharacterized protein LOC101208804 [Cucumis sativus]2.0e-4298.85Show/hide
Query:  MSSGKGRGYSLLAFFFFFVLFISSEVTAARKLKMHQNNEKGIVYLTPRTAIRNKPICDGSGPYSRCIPGSKPPKEKCNPYVRGCSLP
        MSSGKGRGYSLLAFFFFFVLFISSEVTAARKLKMHQNNEKGIVYLTPRTAIRNKPICDGSGPYSRCIP SKPPKEKCNPYVRGCSLP
Subjt:  MSSGKGRGYSLLAFFFFFVLFISSEVTAARKLKMHQNNEKGIVYLTPRTAIRNKPICDGSGPYSRCIPGSKPPKEKCNPYVRGCSLP
TrEMBL top hitse value%identityAlignment
O24512 Pathogen-induced protein CuPi19.5e-4398.85Show/hide
Query:  MSSGKGRGYSLLAFFFFFVLFISSEVTAARKLKMHQNNEKGIVYLTPRTAIRNKPICDGSGPYSRCIPGSKPPKEKCNPYVRGCSLP
        MSSGKGRGYSLLAFFFFFVLFISSEVTAARKLKMHQNNEKGIVYLTPRTAIRNKPICDGSGPYSRCIP SKPPKEKCNPYVRGCSLP
Subjt:  MSSGKGRGYSLLAFFFFFVLFISSEVTAARKLKMHQNNEKGIVYLTPRTAIRNKPICDGSGPYSRCIPGSKPPKEKCNPYVRGCSLP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGTGGAAAGGGACGTGGTTATTCATTGCTGGCTTTTTTCTTCTTCTTCGTTCTCTTCATCTCCTCGGAGGTGACTGCAGCAAGGAAGCTGAAGATGCACCAAAA
CAATGAAAAGGGAATTGTTTACTTGACTCCGAGAACAGCAATTCGCAACAAACCAATCTGCGATGGTAGCGGTCCTTATAGCCGTTGCATCCCTGGAAGTAAGCCACCAA
AGGAAAAGTGCAATCCTTATGTTAGAGGATGCAGCTTGCCGTAG
mRNA sequenceShow/hide mRNA sequence
TGGGAAATGATTCTCAAACTTCATCTTCAAAACAAATTCAATTCCCTCTCCATAATAGTGAGAAAGGAATAAGAATGAGTAGTGGAAAGGGACGTGGTTATTCATTGCTG
GCTTTTTTCTTCTTCTTCGTTCTCTTCATCTCCTCGGAGGTGACTGCAGCAAGGAAGCTGAAGATGCACCAAAACAATGAAAAGGGAATTGTTTACTTGACTCCGAGAAC
AGCAATTCGCAACAAACCAATCTGCGATGGTAGCGGTCCTTATAGCCGTTGCATCCCTGGAAGTAAGCCACCAAAGGAAAAGTGCAATCCTTATGTTAGAGGATGCAGCT
TGCCGTAGACTGAGGACTATCACCTGTTTTTCAAAAAATGAATAAATGATTCCGAAATCACATGGATTTAAATCCTATTTTAAAGTTTTTGTGTATTAATTTATCCTTTC
AAAAAAAGTGTGTGTAATTAATATATATAGTAGTTTATATGATATATGTCAGTTTGGAGTTTAGTATGTTTTATGGTATGGTTATCTCTATGTATTCAGAATCAATTTGG
ACTTTCCATATATATATATTACCAAACATTTGGACTA
Protein sequenceShow/hide protein sequence
MSSGKGRGYSLLAFFFFFVLFISSEVTAARKLKMHQNNEKGIVYLTPRTAIRNKPICDGSGPYSRCIPGSKPPKEKCNPYVRGCSLP