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CSPI07G03230 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G03230
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionhomeobox-DDT domain protein RLT2-like isoform X2
Genome locationChr7:2573002..2573307
RNA-Seq ExpressionCSPI07G03230
SyntenyCSPI07G03230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059122.1 hypothetical protein E6C27_scaffold430G00290 [Cucumis melo var. makuwa]3.9e-1872.46Show/hide
Query:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVH
        MFQQS+ SPSSS + LS D IV  EY+DMPVDD+T+ +QADYPP  QS EMD+NIEHDLSDGDGERG H
Subjt:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVH

KAG6572264.1 Homeobox-DDT domain protein RLT2, partial [Cucurbita argyrosperma subsp. sororia]8.4e-1354.95Show/hide
Query:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQ---------
        M Q+S+ SPSSS + +SIDN  RVEY+DM VDD+ RS QA Y P S+S EMDE+ E DLS   GERG +TMD+E  EYDLS DG +GNV           
Subjt:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQ---------

Query:  --NGEHNEENN
          +GE+NEE+N
Subjt:  --NGEHNEENN

XP_022968923.1 LOW QUALITY PROTEIN: homeobox-DDT domain protein RLT2-like [Cucurbita maxima]3.4e-1456.76Show/hide
Query:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQ---------
        M Q+S+ SPS S + +SIDN  RVEY+DM VDD  RS QA Y P S+S EMDE+ E DLS  DGERG +TMDEE  EYDLS DG +GNV           
Subjt:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQ---------

Query:  --NGEHNEENN
          NGE+NEE+N
Subjt:  --NGEHNEENN

XP_023554340.1 homeobox-DDT domain protein RLT2-like isoform X1 [Cucurbita pepo subsp. pepo]5.8e-1455.86Show/hide
Query:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQ---------
        M Q+S+ SPSSS + +SIDN  RVEY+DM VDD  RS QA Y P S+S E+DE+ E DLS  DGERG +TMDEE  EYDLS DG +GNV           
Subjt:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQ---------

Query:  --NGEHNEENN
          +GE+NEE+N
Subjt:  --NGEHNEENN

XP_023554341.1 homeobox-DDT domain protein RLT2-like isoform X2 [Cucurbita pepo subsp. pepo]5.8e-1455.86Show/hide
Query:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQ---------
        M Q+S+ SPSSS + +SIDN  RVEY+DM VDD  RS QA Y P S+S E+DE+ E DLS  DGERG +TMDEE  EYDLS DG +GNV           
Subjt:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQ---------

Query:  --NGEHNEENN
          +GE+NEE+N
Subjt:  --NGEHNEENN

TrEMBL top hitse value%identityAlignment
A0A0A0K1Z4 Uncharacterized protein1.8e-4597.03Show/hide
Query:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQNGEHNEENN
        MFQQSNES SSSGKFLSIDNIVRVEYNDMPVDD+ RSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQNGEHNEENN
Subjt:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQNGEHNEENN

Query:  L
        L
Subjt:  L

A0A5A7UT95 Uncharacterized protein1.9e-1872.46Show/hide
Query:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVH
        MFQQS+ SPSSS + LS D IV  EY+DMPVDD+T+ +QADYPP  QS EMD+NIEHDLSDGDGERG H
Subjt:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVH

A0A6J1GLQ4 homeobox-DDT domain protein RLT2-like isoform X21.6e-1253.15Show/hide
Query:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQ---------
        M Q+S+ SP+SS + +SIDN  RVEY+DM VDD  RS QA Y P S+S +MDE+ E DLS   GERG +TMD+E  EYDLS DG +GNV           
Subjt:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQ---------

Query:  --NGEHNEENN
          +GE+NEE+N
Subjt:  --NGEHNEENN

A0A6J1GND4 homeobox-DDT domain protein RLT2-like isoform X11.6e-1253.15Show/hide
Query:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQ---------
        M Q+S+ SP+SS + +SIDN  RVEY+DM VDD  RS QA Y P S+S +MDE+ E DLS   GERG +TMD+E  EYDLS DG +GNV           
Subjt:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQ---------

Query:  --NGEHNEENN
          +GE+NEE+N
Subjt:  --NGEHNEENN

A0A6J1HZH7 LOW QUALITY PROTEIN: homeobox-DDT domain protein RLT2-like1.7e-1456.76Show/hide
Query:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQ---------
        M Q+S+ SPS S + +SIDN  RVEY+DM VDD  RS QA Y P S+S EMDE+ E DLS  DGERG +TMDEE  EYDLS DG +GNV           
Subjt:  MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQ---------

Query:  --NGEHNEENN
          NGE+NEE+N
Subjt:  --NGEHNEENN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCAACAAAGTAATGAAAGTCCAAGCAGCTCTGGTAAGTTCCTTTCCATAGATAACATTGTCAGAGTTGAATATAACGATATGCCAGTAGATGACAATACTCGATC
TCGACAAGCTGACTATCCACCAGTTAGCCAAAGTAATGAAATGGATGAAAACATAGAACATGATCTCTCTGATGGAGACGGAGAGAGGGGTGTACACACCATGGACGAAG
AAGGCAATGAATATGACCTTTCTGTTGATGGAGAGAAGGGTAACGTTGAACAGAATGGGGAGCACAATGAAGAAAATAATTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTCAACAAAGTAATGAAAGTCCAAGCAGCTCTGGTAAGTTCCTTTCCATAGATAACATTGTCAGAGTTGAATATAACGATATGCCAGTAGATGACAATACTCGATC
TCGACAAGCTGACTATCCACCAGTTAGCCAAAGTAATGAAATGGATGAAAACATAGAACATGATCTCTCTGATGGAGACGGAGAGAGGGGTGTACACACCATGGACGAAG
AAGGCAATGAATATGACCTTTCTGTTGATGGAGAGAAGGGTAACGTTGAACAGAATGGGGAGCACAATGAAGAAAATAATTTATAG
Protein sequenceShow/hide protein sequence
MFQQSNESPSSSGKFLSIDNIVRVEYNDMPVDDNTRSRQADYPPVSQSNEMDENIEHDLSDGDGERGVHTMDEEGNEYDLSVDGEKGNVEQNGEHNEENNL