; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G03540 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G03540
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCCR4-NOT transcription complex subunit 9-like isoform X1
Genome locationChr7:2800453..2804213
RNA-Seq ExpressionCSPI07G03540
SyntenyCSPI07G03540
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0000932 - P-body (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
InterPro domainsIPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144502.1 cell differentiation protein rcd1 isoform X1 [Cucumis sativus]1.3e-17099.67Show/hide
Query:  MANLPVSLFAEPTTALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCN
        MANLPV LFAEPTTALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCN
Subjt:  MANLPVSLFAEPTTALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCN

Query:  ALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMN
        ALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMN
Subjt:  ALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMN

Query:  EEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRDDGNKQG
        EEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRDDGNKQG
Subjt:  EEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRDDGNKQG

Query:  NPKTG
        NPKTG
Subjt:  NPKTG

XP_008455454.1 PREDICTED: cell differentiation protein rcd1 isoform X1 [Cucumis melo]5.4e-14891.3Show/hide
Query:  MANLPVSLFAEPTTALEP-----NPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDS
        MANLP SLF EPTTA  P     +PP TDLTNV VDELILALNHARTRERALHLLSQ RSMFDNLAVLIWHSFGTMFTLLKEIMDVYH+LSKP+LTEK S
Subjt:  MANLPVSLFAEPTTALEP-----NPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDS

Query:  TRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQ
        TRVCNALALLQCVASHPETRVPFMKA+IPLYLYPFLNTTIKEKPHE LRLTSLGVIGALVKV+DKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQ
Subjt:  TRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQ

Query:  KILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRD
        KILMNEEGLRYCCIIADRFFAIT ALETMME LSEEPSQRLLKHI RCYLMLSESPRACLGLGRLLPRML+ SAFTDLLHDDPTVMSSFKQLLRKVH +
Subjt:  KILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRD

XP_011658697.1 cell differentiation protein rcd1 isoform X2 [Cucumis sativus]8.3e-16597.38Show/hide
Query:  MANLPVSLFAEPTTALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCN
        MANLPV LFAEPTTALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCN
Subjt:  MANLPVSLFAEPTTALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCN

Query:  ALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMN
        ALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKT       KILMN
Subjt:  ALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMN

Query:  EEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRDDGNKQG
        EEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRDDGNKQG
Subjt:  EEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRDDGNKQG

Query:  NPKTG
        NPKTG
Subjt:  NPKTG

XP_038888594.1 cell differentiation protein rcd1 isoform X1 [Benincasa hispida]2.4e-14886.81Show/hide
Query:  MANLPVSLF-----AEPTTALEP---NPPLTDLTNVSVDELILALNHARTRERALHLLS---------QNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYH
        MANLP SLF     AEPTTA EP   +PP TDL+NVSV ELILALNHA TRERAL LLS         QNRSM DNLAVLIWHSFGTMFTLLKEIM+VYH
Subjt:  MANLPVSLF-----AEPTTALEP---NPPLTDLTNVSVDELILALNHARTRERALHLLS---------QNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYH

Query:  MLSKPDLTEKDSTRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGK
        +LSKPDLTEK STRVC+ALALLQCVASHPETR+PFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGK
Subjt:  MLSKPDLTEKDSTRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGK

Query:  GLSKTVATFIVQKILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSS
        GLSKTVATFIVQKILMNEEGLRYCCIIADRFFAIT ALETMMERLSEEPSQRLLKHI RCYL LSESPRACLGLGRLLPRMLNDSAFTDLL DDPTVMSS
Subjt:  GLSKTVATFIVQKILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSS

Query:  FKQLLRKVH----RDDGNKQGNPKTG
        FKQLLR VH    RD+ +KQGNPKTG
Subjt:  FKQLLRKVH----RDDGNKQGNPKTG

XP_038888595.1 cell differentiation protein rcd1 isoform X2 [Benincasa hispida]1.2e-15089.27Show/hide
Query:  MANLPVSLF-----AEPTTALEP---NPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTE
        MANLP SLF     AEPTTA EP   +PP TDL+NVSV ELILALNHA TRERAL LLSQNRSM DNLAVLIWHSFGTMFTLLKEIM+VYH+LSKPDLTE
Subjt:  MANLPVSLF-----AEPTTALEP---NPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTE

Query:  KDSTRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATF
        K STRVC+ALALLQCVASHPETR+PFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATF
Subjt:  KDSTRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATF

Query:  IVQKILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVH
        IVQKILMNEEGLRYCCIIADRFFAIT ALETMMERLSEEPSQRLLKHI RCYL LSESPRACLGLGRLLPRMLNDSAFTDLL DDPTVMSSFKQLLR VH
Subjt:  IVQKILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVH

Query:  ----RDDGNKQGNPKTG
            RD+ +KQGNPKTG
Subjt:  ----RDDGNKQGNPKTG

TrEMBL top hitse value%identityAlignment
A0A0A0K3J1 Uncharacterized protein6.4e-17199.67Show/hide
Query:  MANLPVSLFAEPTTALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCN
        MANLPV LFAEPTTALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCN
Subjt:  MANLPVSLFAEPTTALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCN

Query:  ALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMN
        ALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMN
Subjt:  ALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMN

Query:  EEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRDDGNKQG
        EEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRDDGNKQG
Subjt:  EEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRDDGNKQG

Query:  NPKTG
        NPKTG
Subjt:  NPKTG

A0A1S3C1N6 cell differentiation protein rcd1 isoform X12.6e-14891.3Show/hide
Query:  MANLPVSLFAEPTTALEP-----NPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDS
        MANLP SLF EPTTA  P     +PP TDLTNV VDELILALNHARTRERALHLLSQ RSMFDNLAVLIWHSFGTMFTLLKEIMDVYH+LSKP+LTEK S
Subjt:  MANLPVSLFAEPTTALEP-----NPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDS

Query:  TRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQ
        TRVCNALALLQCVASHPETRVPFMKA+IPLYLYPFLNTTIKEKPHE LRLTSLGVIGALVKV+DKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQ
Subjt:  TRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQ

Query:  KILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRD
        KILMNEEGLRYCCIIADRFFAIT ALETMME LSEEPSQRLLKHI RCYLMLSESPRACLGLGRLLPRML+ SAFTDLLHDDPTVMSSFKQLLRKVH +
Subjt:  KILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRD

A0A1S3C270 cell differentiation protein rcd1 isoform X21.6e-14288.96Show/hide
Query:  MANLPVSLFAEPTTALEP-----NPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDS
        MANLP SLF EPTTA  P     +PP TDLTNV VDELILALNHARTRERALHLLSQ RSMFDNLAVLIWHSFGTMFTLLKEIMDVYH+LSKP+LTEK S
Subjt:  MANLPVSLFAEPTTALEP-----NPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDS

Query:  TRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQ
        TRVCNALALLQCVASHPETRVPFMKA+IPLYLYPFLNTTIKEKPHE LRLTSLGVIGALVKV+DKEVIYFLLKTEIVPYCLRCMDVGKGLSKT       
Subjt:  TRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQ

Query:  KILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRD
        KILMNEEGLRYCCIIADRFFAIT ALETMME LSEEPSQRLLKHI RCYLMLSESPRACLGLGRLLPRML+ SAFTDLLHDDPTVMSSFKQLLRKVH +
Subjt:  KILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRD

A0A5A7TG39 Cell differentiation protein rcd1 isoform X11.6e-14590.33Show/hide
Query:  MANLPVSLFAEPTTALEP-----NPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDS
        MANLP SLF EPTTA  P     +PP TDLTNV V ELILALNHARTRERALHLLSQ RSMFDNLAVLIWHSFGTMFTLLKEIMDVYH+LSKP+LTEK S
Subjt:  MANLPVSLFAEPTTALEP-----NPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDS

Query:  TRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVK-VDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIV
        TRVCNALALLQCVASHPETRVPFMKA+IPLYLYPFLNTTIKEKPHE LRLT LGVIGALVK V+DKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIV
Subjt:  TRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVK-VDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIV

Query:  QKILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRD
        QKILMNEEGLRYCCIIADRFFAIT ALETMME LSEEPSQRLLKHI RCYLMLSESPRACLGLGRLLPRML+ SAFTDLLHDDPTVMSSFKQLLRKVH +
Subjt:  QKILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRD

A0A5D3C9W8 Cell differentiation protein rcd1 isoform X11.8e-14487.7Show/hide
Query:  MANLPVSLFAEPTTALEP-----NPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDS
        MANLP SLF EPTTA  P     +PP TDLTNV V ELILALNHARTRERALHLLSQ RSMFDNLAVLIWHSFGTMFTLLKEIMDVYH+LSKP+LTEK S
Subjt:  MANLPVSLFAEPTTALEP-----NPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDS

Query:  TRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKT-------
        TRVCNALALLQCVASHPETRVPFMKA+IPLYLYPFLNTTIKEKPHE LRLT LGVIGALVKV+DKEVIYFLLKTEIVPYCLRCMDVGKGLSKT       
Subjt:  TRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKT-------

Query:  ---VATFIVQKILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFK
           VATFIVQKILMNEEGLRYCCIIADRFFAIT ALETMME LSEEPSQRLLKHI RCYLMLSESPRACLGLGRLLPRML+ SAFTDLLHDDPTVMSSFK
Subjt:  ---VATFIVQKILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFK

Query:  QLLRKVHRD
        QLLRKVH +
Subjt:  QLLRKVHRD

SwissProt top hitse value%identityAlignment
A7MB47 CCR4-NOT transcription complex subunit 95.9e-7352.52Show/hide
Query:  TALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCNALALLQCVASHPE
        TA      L  +    + + I  L+   TRE AL  LS+ R    +LA ++WHSFGT+  LL+EI+++Y  ++ P LT   S RVCNALALLQCVASHPE
Subjt:  TALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCNALALLQCVASHPE

Query:  TRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMNEEGLRYCCIIADR
        TR  F+ A IPL+LYPFL+T  K +P EYLRLTSLGVIGALVK D++EVI FLL TEI+P CLR M+ G  LSKTVATFI+QKIL+++ GL Y C   +R
Subjt:  TRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMNEEGLRYCCIIADR

Query:  FFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKV
        F  +   L  M+ +LS+EPS RLLKH+ RCYL LS++PRA   L + LP  L D+ F  +L DD T      QL++ +
Subjt:  FFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKV

Q4R347 CCR4-NOT transcription complex subunit 95.9e-7352.52Show/hide
Query:  TALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCNALALLQCVASHPE
        TA      L  +    + + I  L+   TRE AL  LS+ R    +LA ++WHSFGT+  LL+EI+++Y  ++ P LT   S RVCNALALLQCVASHPE
Subjt:  TALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCNALALLQCVASHPE

Query:  TRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMNEEGLRYCCIIADR
        TR  F+ A IPL+LYPFL+T  K +P EYLRLTSLGVIGALVK D++EVI FLL TEI+P CLR M+ G  LSKTVATFI+QKIL+++ GL Y C   +R
Subjt:  TRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMNEEGLRYCCIIADR

Query:  FFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKV
        F  +   L  M+ +LS+EPS RLLKH+ RCYL LS++PRA   L + LP  L D+ F  +L DD T      QL++ +
Subjt:  FFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKV

Q5R6Z6 CCR4-NOT transcription complex subunit 95.9e-7352.52Show/hide
Query:  TALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCNALALLQCVASHPE
        TA      L  +    + + I  L+   TRE AL  LS+ R    +LA ++WHSFGT+  LL+EI+++Y  ++ P LT   S RVCNALALLQCVASHPE
Subjt:  TALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCNALALLQCVASHPE

Query:  TRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMNEEGLRYCCIIADR
        TR  F+ A IPL+LYPFL+T  K +P EYLRLTSLGVIGALVK D++EVI FLL TEI+P CLR M+ G  LSKTVATFI+QKIL+++ GL Y C   +R
Subjt:  TRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMNEEGLRYCCIIADR

Query:  FFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKV
        F  +   L  M+ +LS+EPS RLLKH+ RCYL LS++PRA   L + LP  L D+ F  +L DD T      QL++ +
Subjt:  FFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKV

Q92600 CCR4-NOT transcription complex subunit 95.9e-7352.52Show/hide
Query:  TALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCNALALLQCVASHPE
        TA      L  +    + + I  L+   TRE AL  LS+ R    +LA ++WHSFGT+  LL+EI+++Y  ++ P LT   S RVCNALALLQCVASHPE
Subjt:  TALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCNALALLQCVASHPE

Query:  TRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMNEEGLRYCCIIADR
        TR  F+ A IPL+LYPFL+T  K +P EYLRLTSLGVIGALVK D++EVI FLL TEI+P CLR M+ G  LSKTVATFI+QKIL+++ GL Y C   +R
Subjt:  TRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMNEEGLRYCCIIADR

Query:  FFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKV
        F  +   L  M+ +LS+EPS RLLKH+ RCYL LS++PRA   L + LP  L D+ F  +L DD T      QL++ +
Subjt:  FFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKV

Q9JKY0 CCR4-NOT transcription complex subunit 95.9e-7352.52Show/hide
Query:  TALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCNALALLQCVASHPE
        TA      L  +    + + I  L+   TRE AL  LS+ R    +LA ++WHSFGT+  LL+EI+++Y  ++ P LT   S RVCNALALLQCVASHPE
Subjt:  TALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCNALALLQCVASHPE

Query:  TRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMNEEGLRYCCIIADR
        TR  F+ A IPL+LYPFL+T  K +P EYLRLTSLGVIGALVK D++EVI FLL TEI+P CLR M+ G  LSKTVATFI+QKIL+++ GL Y C   +R
Subjt:  TRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMNEEGLRYCCIIADR

Query:  FFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKV
        F  +   L  M+ +LS+EPS RLLKH+ RCYL LS++PRA   L + LP  L D+ F  +L DD T      QL++ +
Subjt:  FFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKV

Arabidopsis top hitse value%identityAlignment
AT2G32550.1 Cell differentiation, Rcd1-like protein2.2e-3831.01Show/hide
Query:  MANLPVSLFAE------------PTTALEPNPPLTDLTNVSVDELI-----LALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVY-
        M NLP SL+ +             +++  P P L+ + + +V+ +I     +    +   + ALH L+ +R+ F+ L  L+W S  T++ +L+E+ + Y 
Subjt:  MANLPVSLFAE------------PTTALEPNPPLTDLTNVSVDELI-----LALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVY-

Query:  HMLSKPDLT----EKDSTRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKV-DDKEVIYFLLKTEIVPYCLR
        H+     L       +  RV N   L Q +A HP+T   F++AK+P Y YP ++T + +K  E +RL +LGVI  ++K  +D  V  +L+++ +V +C++
Subjt:  HMLSKPDLT----EKDSTRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKV-DDKEVIYFLLKTEIVPYCLR

Query:  CMDVGKGLSKTVATFIVQKILMNEEGLRYCCIIADRFFAITHALETMMERLSE--EPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLH
         ++ G   +K VA +I+ KI+  ++GL YCC++ADRF+ I   L+ ++  LS    P   L   +  CY+ LS++ RA  G+ R  P +L D  F+ L  
Subjt:  CMDVGKGLSKTVATFIVQKILMNEEGLRYCCIIADRFFAITHALETMMERLSE--EPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLH

Query:  DDPTVMSSFKQLLRKV
        +DP   ++  QLL+ +
Subjt:  DDPTVMSSFKQLLRKV

AT3G20800.1 Cell differentiation, Rcd1-like protein4.8e-8655.52Show/hide
Query:  MANLPVSL-----FAEPTTALE---PNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTE
        MANLP SL     F  P+T+ +     P   D    S ++L+L L++   RE AL  LS+ R +F +LA L+W+SFGT+  LL+EI+ +Y +L+ P+LT 
Subjt:  MANLPVSL-----FAEPTTALE---PNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTE

Query:  KDSTRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATF
          S RVCN+LALLQCVASH +TR+ F+KA IPLYLYPFLNTT K +P EYLRLTSLGVIGALVKVDD EVI FLL TEI+P CLR M++G  LSKTVATF
Subjt:  KDSTRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATF

Query:  IVQKILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKV
        IVQKIL+++ G+ Y C  A+RFFA+   L  M++ L E+PS RLLKHI RCYL LS++PRAC  L   LP  L D +F++ L +DPT     +QL+  V
Subjt:  IVQKILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKV

AT5G12980.1 Cell differentiation, Rcd1-like protein5.3e-8555.26Show/hide
Query:  MANLPVSLFAEPTTALEPNPPLTDLTN----VSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDST
        MANLP  L  +       + P +   N     S ++LIL L++   RE ALH LS+ R +F +LA L+WHS GT+  LL+EI+ VY  LS P +T   S 
Subjt:  MANLPVSLFAEPTTALEPNPPLTDLTN----VSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDST

Query:  RVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQK
        RVCNALALLQCVASH +TR+ F+KA +PLYLY FLNT+ K +P EYLRLTSLGVIGALVKVDD EVI FLL+TEIVP CLR M+ G  LSKTVATFIVQK
Subjt:  RVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQK

Query:  ILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRDDG
        +L+++ GL Y C  A+RFFA+   L  M+  L+E PS RLLKHI RCYL L+++PRAC  LG  LP +L D+ F+  L+DDP  M   +QLL  V+    
Subjt:  ILMNEEGLRYCCIIADRFFAITHALETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRDDG

Query:  NKQG
          QG
Subjt:  NKQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATCTTCCTGTCTCTCTGTTCGCTGAACCAACCACCGCCTTGGAACCCAATCCTCCTCTTACGGACCTAACCAATGTCTCTGTTGATGAGCTCATTCTCGCTCT
CAACCACGCCCGTACTCGTGAACGTGCTTTGCACCTTCTTTCTCAGAACAGGAGTATGTTTGATAATTTGGCTGTTCTGATATGGCATTCCTTTGGTACTATGTTTACCC
TTCTGAAGGAAATTATGGACGTTTACCATATGCTGTCCAAGCCTGACCTTACAGAAAAAGATTCAACTAGGGTCTGCAATGCTCTTGCTCTTCTTCAGTGTGTAGCCTCT
CACCCAGAAACAAGGGTGCCATTTATGAAAGCTAAAATTCCACTCTATTTGTACCCTTTCCTTAATACCACCATCAAGGAAAAACCTCATGAATATCTCAGACTCACTAG
CTTAGGAGTAATTGGTGCACTAGTGAAGGTTGATGACAAGGAAGTTATTTACTTCCTACTCAAAACGGAAATAGTTCCATACTGTCTGCGATGCATGGATGTGGGAAAAG
GCTTGTCAAAAACGGTTGCCACGTTTATTGTTCAGAAAATTCTAATGAATGAAGAGGGATTGAGGTACTGCTGTATCATAGCTGATCGCTTTTTTGCAATAACTCATGCC
TTGGAAACAATGATGGAAAGACTTTCGGAAGAACCCTCACAACGGCTGCTTAAACATATTTTTCGCTGTTATCTTATGCTCTCTGAAAGTCCAAGGGCTTGCCTGGGACT
TGGGAGACTCCTTCCTCGGATGCTAAACGACAGCGCCTTTACTGACCTCCTTCATGATGATCCGACTGTCATGAGCTCTTTCAAGCAGTTGCTTCGCAAGGTACATCGAG
ACGATGGAAACAAACAAGGCAATCCAAAAACAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATAAAGGCAAAGAATATGCAGACAACAAAGAGAATCATGTTTTCTTCCAAACCAATCTCCACATTTCTTTTTCGATTTCACTTTCACTTCCTCACTTTCTTCTCTCTTTT
CTCATTTCCCATTTCCCAACTCCCAACTCTCTCTTCCCATTTCCTCAATCATGGCCAATCTTCCTGTCTCTCTGTTCGCTGAACCAACCACCGCCTTGGAACCCAATCCT
CCTCTTACGGACCTAACCAATGTCTCTGTTGATGAGCTCATTCTCGCTCTCAACCACGCCCGTACTCGTGAACGTGCTTTGCACCTTCTTTCTCAGAACAGGAGTATGTT
TGATAATTTGGCTGTTCTGATATGGCATTCCTTTGGTACTATGTTTACCCTTCTGAAGGAAATTATGGACGTTTACCATATGCTGTCCAAGCCTGACCTTACAGAAAAAG
ATTCAACTAGGGTCTGCAATGCTCTTGCTCTTCTTCAGTGTGTAGCCTCTCACCCAGAAACAAGGGTGCCATTTATGAAAGCTAAAATTCCACTCTATTTGTACCCTTTC
CTTAATACCACCATCAAGGAAAAACCTCATGAATATCTCAGACTCACTAGCTTAGGAGTAATTGGTGCACTAGTGAAGGTTGATGACAAGGAAGTTATTTACTTCCTACT
CAAAACGGAAATAGTTCCATACTGTCTGCGATGCATGGATGTGGGAAAAGGCTTGTCAAAAACGGTTGCCACGTTTATTGTTCAGAAAATTCTAATGAATGAAGAGGGAT
TGAGGTACTGCTGTATCATAGCTGATCGCTTTTTTGCAATAACTCATGCCTTGGAAACAATGATGGAAAGACTTTCGGAAGAACCCTCACAACGGCTGCTTAAACATATT
TTTCGCTGTTATCTTATGCTCTCTGAAAGTCCAAGGGCTTGCCTGGGACTTGGGAGACTCCTTCCTCGGATGCTAAACGACAGCGCCTTTACTGACCTCCTTCATGATGA
TCCGACTGTCATGAGCTCTTTCAAGCAGTTGCTTCGCAAGGTACATCGAGACGATGGAAACAAACAAGGCAATCCAAAAACAGGCTGAAGTTATGTGCAAACTTTGCCAA
TTCTACTGCACAGAATTATATAATAACATACACATAGCTCTAAAAATGAGTCAGTTCCTCCATCTTTCACACATCTCTTTACTATGTAGATCACAGGAGTAGATGTTGTA
ATTTGAACCACTTAAACCATAGTGTTAGGCCTTTCTTTTCTTCTTCCAAGGC
Protein sequenceShow/hide protein sequence
MANLPVSLFAEPTTALEPNPPLTDLTNVSVDELILALNHARTRERALHLLSQNRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHMLSKPDLTEKDSTRVCNALALLQCVAS
HPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTVATFIVQKILMNEEGLRYCCIIADRFFAITHA
LETMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDDPTVMSSFKQLLRKVHRDDGNKQGNPKTG