CuGenDBv2

Gene ID	CSPI07G03700
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	ThiF domain-containing protein
Genome location	Chr7:2921444..2924501
RNA-Seq Expression	CSPI07G03700
Synteny	CSPI07G03700
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004144589.1 uncharacterized protein LOC101204134 [Cucumis sativus]

3.2e-56

100

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Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSAPSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPT
        MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSAPSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPT
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSAPSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPT

Query:  NLTPDSPPDPVIEVLGG
        NLTPDSPPDPVIEVLGG
Subjt:  NLTPDSPPDPVIEVLGG

XP_008455441.1 PREDICTED: uncharacterized protein LOC103495597 [Cucumis melo]

1.6e-52

95.76

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Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS-APSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSP
        MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS   SSLPIDS LLQVNIVDASPSFAGR YGPLSLQRKKLLASKSLWFLASSP
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS-APSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSP

Query:  TNLTPDSPPDPVIEVLGG
        TNLTPDSPPDPVIEVLGG
Subjt:  TNLTPDSPPDPVIEVLGG

XP_022930695.1 uncharacterized protein LOC111437092 [Cucurbita moschata]

1.8e-46

83.33

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Query:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS------APSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKS
        MNRRSR   RS  S SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS      +P + PIDSALLQVNIVDASP FAGR YGPL LQRKKLLA+KS
Subjt:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS------APSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKS

Query:  LWFLASSPTNLTPDSPPDPVIEVLGG
        LWFL+SSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLASSPTNLTPDSPPDPVIEVLGG

XP_023530330.1 uncharacterized protein LOC111792933 [Cucurbita pepo subsp. pepo]

1.8e-46

83.33

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Query:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS------APSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKS
        MNRRSR   RS  S SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS      +P + PIDSALLQVNIVDASP FAGR YGPL LQRKKLLA+KS
Subjt:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS------APSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKS

Query:  LWFLASSPTNLTPDSPPDPVIEVLGG
        LWFL+SSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLASSPTNLTPDSPPDPVIEVLGG

XP_038888488.1 uncharacterized protein LOC120078321 [Benincasa hispida]

2.4e-51

90.16

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Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSA-----PSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFL
        MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS      PS++PIDS LLQVNIVDASPSFAGR YGPL LQRKKLLASKSLWFL
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSA-----PSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFL

Query:  ASSPTNLTPDSPPDPVIEVLGG
         SSPTNLTPDSPPDPVIEVLGG
Subjt:  ASSPTNLTPDSPPDPVIEVLGG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K3K2 Uncharacterized protein

1.6e-56

100

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Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSAPSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPT
        MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSAPSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPT
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSAPSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPT

Query:  NLTPDSPPDPVIEVLGG
        NLTPDSPPDPVIEVLGG
Subjt:  NLTPDSPPDPVIEVLGG

A0A1S3C0X0 uncharacterized protein LOC103495597

8.0e-53

95.76

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Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS-APSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSP
        MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS   SSLPIDS LLQVNIVDASPSFAGR YGPLSLQRKKLLASKSLWFLASSP
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS-APSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSP

Query:  TNLTPDSPPDPVIEVLGG
        TNLTPDSPPDPVIEVLGG
Subjt:  TNLTPDSPPDPVIEVLGG

A0A5D3C9X6 Uncharacterized protein

8.0e-53

95.76

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Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS-APSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSP
        MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS   SSLPIDS LLQVNIVDASPSFAGR YGPLSLQRKKLLASKSLWFLASSP
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS-APSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSP

Query:  TNLTPDSPPDPVIEVLGG
        TNLTPDSPPDPVIEVLGG
Subjt:  TNLTPDSPPDPVIEVLGG

A0A6J1EXJ2 uncharacterized protein LOC111437092

8.5e-47

83.33

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Query:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS------APSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKS
        MNRRSR   RS  S SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS      +P + PIDSALLQVNIVDASP FAGR YGPL LQRKKLLA+KS
Subjt:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS------APSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKS

Query:  LWFLASSPTNLTPDSPPDPVIEVLGG
        LWFL+SSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLASSPTNLTPDSPPDPVIEVLGG

A0A6J1GLZ8 uncharacterized protein LOC111455201

8.5e-47

84.68

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Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS------APSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASK-SLW
        MNRRSRRSGNS SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS      +PS+ PI S LLQVNI DASP FAGR YGPL LQRKKLLA+K SLW
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS------APSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASK-SLW

Query:  FLASSPTNLTPDSPPDPVIEVLGG
        FLASSPTNLTPDSPPDPVI VLGG
Subjt:  FLASSPTNLTPDSPPDPVIEVLGG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G26960.1 unknown protein

6.5e-07

34.19

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Query:  RSGNSQSETFHKYLKPGALAQIRNSRM---IARFNRVNLVSQIYSAPSS---LPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPT
        RS   +++ FH+Y+KPGALAQIRN+R+    + F     +S     PSS    PI +A  Q   +D  P    + YGP  + RKKL  ++      S+  
Subjt:  RSGNSQSETFHKYLKPGALAQIRNSRM---IARFNRVNLVSQIYSAPSS---LPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPT

Query:  NLTPDSPPDPVIEVLGG
         L P   P+ ++E + G
Subjt:  NLTPDSPPDPVIEVLGG

AT5G54970.1 unknown protein

8.2e-10

39.36

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Query:  RSGNSQSETFHKYLKPGALAQIRNSR--------MIARFNRVNLVSQIYSAPSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSL
        +S   +S+ FH+YLKPGALAQIRNSR        +++R +   LV  I  + +S+   +A  +   +D  P    + YGP S QRKKL A++S+
Subjt:  RSGNSQSETFHKYLKPGALAQIRNSR--------MIARFNRVNLVSQIYSAPSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSL

Sequences

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CDS sequence

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ATGAATCGGAGATCCAGAAGATCGGGAAACTCTCAATCCGAGACGTTTCACAAGTATCTAAAGCCTGGTGCGCTAGCACAAATTCGGAATTCTCGAATGATCGCTCGATT
CAATCGGGTTAATTTGGTCTCTCAGATCTACTCCGCTCCTTCCAGTCTTCCGATCGACTCCGCTTTACTTCAGGTCAACATTGTTGATGCTTCTCCTTCCTTTGCTGGGA
GGGCGTATGGTCCTCTCTCTTTGCAGAGGAAGAAACTTTTGGCTTCCAAGTCTTTGTGGTTCCTCGCTTCTAGCCCTACTAATCTCACGCCTGATTCTCCGCCTGATCCG
GTTATTGAAGTGTTAGGGGGGTGA

mRNA sequence

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GCTCTTTCAAAAGCGCTAAACAAATAAACAAATATAATTTCTCTATTTCTTTCTCTCTCTTCCTATTTTGTTTTCCCTCCACCCCTTTCCCGCCTCTCCTCTCCCTATCT
CTCTCCATAAAATCCCCATTCTCCCTTCTCCATTCCCTCTCATCCTCAATTCTCATCTTCATCTCCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATCTCTGCCA
CATCATGAATCGGAGATCCAGAAGATCGGGAAACTCTCAATCCGAGACGTTTCACAAGTATCTAAAGCCTGGTGCGCTAGCACAAATTCGGAATTCTCGAATGATCGCTC
GATTCAATCGGGTTAATTTGGTCTCTCAGATCTACTCCGCTCCTTCCAGTCTTCCGATCGACTCCGCTTTACTTCAGGTCAACATTGTTGATGCTTCTCCTTCCTTTGCT
GGGAGGGCGTATGGTCCTCTCTCTTTGCAGAGGAAGAAACTTTTGGCTTCCAAGTCTTTGTGGTTCCTCGCTTCTAGCCCTACTAATCTCACGCCTGATTCTCCGCCTGA
TCCGGTTATTGAAGTGTTAGGGGGGTGAACTGTACAAGTCTTCTTCTATGGAATACTTTCAACTTGTGAATCTAGTCTTTTTTTATGAAATTAAATATAACTGTAATACA
TGATACCTTTTGTAGGTAGTGTTGACGATGTGTTGTGAATTTTTTTTTCTTGGTTTTGATCGGATTTAAATAATAAGATCTATCATATTCTCGATCTATTGTGTTTACGA
CACCGAAGTCAGTTTTATTCTTCAGTTTTGTTTATCTTATCTACGCCATTCTATTAAACTTTTCTAAACTAGGGCTCATTTTGGACCTTAATGCTTGGGGCTTATGTTGA
ACTTCTGGTCAACTTTGGTCCTCGACTTATAAAGTAAGGGTTTAGAAGCATTTGCAAACTTCTTCCAGCAATTTCACCAATAATGCGGGTTGAGGTCGCAGCTTAGAGAA
ATGACAATTGATATGCCTTCCAAGC

Protein sequence

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MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSAPSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDP
VIEVLGG

CSPI07G03700 (gene) of Cucumber (PI 183967) v1 genome