; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G03780 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G03780
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description50S ribosomal protein L6
Genome locationChr7:2987546..2990798
RNA-Seq ExpressionCSPI07G03780
SyntenyCSPI07G03780
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000702 - Ribosomal protein L6
IPR002358 - Ribosomal protein L6, conserved site
IPR019906 - Ribosomal protein L6, bacterial-type
IPR020040 - Ribosomal protein L6, alpha-beta domain
IPR036789 - Ribosomal protein L6, alpha-beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572299.1 50S ribosomal protein L6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-11188.41Show/hide
Query:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA+SS P L   + I   NNFRSTFLGEKNGF +S MP  H G+LRKTIECKESRIGKQPIQVPS+V ITLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GI+RVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPVRMAIP+G+Q+KVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADE+VRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

XP_004144493.1 50S ribosomal protein L6, chloroplastic [Cucumis sativus]8.1e-128100Show/hide
Query:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

XP_008455431.1 PREDICTED: 50S ribosomal protein L6, chloroplastic [Cucumis melo]7.6e-12698.28Show/hide
Query:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MALSSPPSLQPP+ IHSPNNFRSTFLGEKNGFCVSAMP CHIGLLRKTIECKESRIGKQPIQVPS+VTITLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

XP_022952947.1 50S ribosomal protein L6, chloroplastic-like [Cucurbita moschata]1.1e-11188.84Show/hide
Query:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA+SS P L   + I   NNFRSTFLGEKNGF +S MP  H G+LRKTIECKESRIGKQPIQVPS+V ITLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GI+RVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPVRMAIP+G+Q+KVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

XP_038888704.1 50S ribosomal protein L6, chloroplastic [Benincasa hispida]9.0e-11991.85Show/hide
Query:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA+SS PSLQPP+ +H+ NNFRSTFLGE+NGF VSAMP CHIG+LRKTIECKESRIGKQPI VPS+VTI+LQGQDLKVKGPLGELSILYPRE+KIEREDS
Subjt:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPV+MAIPDGIQ+KVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

TrEMBL top hitse value%identityAlignment
A0A0A0K3K9 Uncharacterized protein3.9e-128100Show/hide
Query:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

A0A1S3C0W5 50S ribosomal protein L6, chloroplastic3.7e-12698.28Show/hide
Query:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MALSSPPSLQPP+ IHSPNNFRSTFLGEKNGFCVSAMP CHIGLLRKTIECKESRIGKQPIQVPS+VTITLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

A0A6J1C3Z5 50S ribosomal protein L6, chloroplastic9.7e-11192.56Show/hide
Query:  NNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIRVKKALETRRANQMH
        +NFRSTFLGEKNGF VS MP CHIGLLRKTIECKESRIGKQPIQVPS+V I LQGQDLKVKGPLGELSILYPREVKIEREDSGI+RVKKA+ETRRA QMH
Subjt:  NNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIRVKKALETRRANQMH

Query:  GLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPVRMAIPDG+Q+KVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEIVRRKEGKAGKKK
        DE+VRRKEGKAGKKK
Subjt:  DEIVRRKEGKAGKKK

A0A6J1GLT4 50S ribosomal protein L6, chloroplastic-like5.2e-11288.84Show/hide
Query:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA+SS P L   + I   NNFRSTFLGEKNGF +S MP  H G+LRKTIECKESRIGKQPIQVPS+V ITLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GI+RVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPVRMAIP+G+Q+KVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

A0A6J1HVU0 50S ribosomal protein L6, chloroplastic-like7.5e-11187.98Show/hide
Query:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA+SS P L   + I   NNFRSTFLGEKNGF +S MP  H G+LRKTIECKESRIGKQPIQVPS+V ITLQGQDLKVKGPLGELSI+YPREVKIEREDS
Subjt:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GI+RVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPV MAIP+G+Q+KVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

SwissProt top hitse value%identityAlignment
B0C1E7 50S ribosomal protein L64.4e-5258.66Show/hide
Query:  SRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEG
        SRIGK PI +P  V +T++GQ + VKGP GELS     EV IE+ D+ ++ V +  E+R A Q HGL RTL  NMV GVSKGFEKKLQ+ GVGYRA V+G
Subjt:  SRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEG

Query:  KDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK
        ++L+LN+G+S+PV +  P+G+Q+ VE NT + VSG +K  +G  AA IR  RPPEPYKGKG++YADE VRRK GKAGKK
Subjt:  KDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK

B7KI01 50S ribosomal protein L61.1e-5055.31Show/hide
Query:  SRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEG
        SRIGK+PI +P+ VT+ + G  + VKGP GEL    P  V +E +D G++RV +  ++R A Q HGL RTL  NMV GVSKGFEK+L++ GVGYRA  +G
Subjt:  SRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEG

Query:  KDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK
          L LN+G+S PV M +P GI + VE+NT IT++G DK  +G  AA IR  RPPEPYKGKG++Y  E+VRRK GK GKK
Subjt:  KDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK

O23049 50S ribosomal protein L6, chloroplastic1.8e-9373.39Show/hide
Query:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA S   S QP          RS FLG++N F VS+ P   +G   KTIECKESRIGKQPI VPS+VTI L+GQDLKVKGPLGEL++ YPREV++ +E+S
Subjt:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        G +RVKK +ETRRANQMHGLFRTLTDNMVVGVSKGFEKKL L+GVGYRA V+GK+LVLNLGFSHPV+M IPD +++KVEENTRITVSGYDK  IGQFAA+
Subjt:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        +R+WRPPEPYKGKGVKY+DEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

P82193 50S ribosomal protein L6, chloroplastic3.7e-9173.18Show/hide
Query:  SIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIRVKKALETRR
        S+  P++ +S FLG K     S +P   IG  RK+++CKESRIGKQPI VP++V I ++GQDLKVKGPLGELSI YPREV +E+++SG +RV+KA+ETRR
Subjt:  SIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIRVKKALETRR

Query:  ANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGK
        ANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRA VEGKDL+L+LGFSHPVRMAIPD +Q+KVEENT++TVSG DK  +GQFAA+IR WRPPEPYKGK
Subjt:  ANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGK

Query:  GVKYADEIVRRKEGKAGKKK
        GV+Y DE+VRRKEGKAGKKK
Subjt:  GVKYADEIVRRKEGKAGKKK

Q8YPJ3 50S ribosomal protein L61.1e-5055.62Show/hide
Query:  SRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEG
        SRIGK+PI VP+ V +T+ G  + VKGP GELS   P  V + +E    ++V +  ETR + Q+HGL RTL  NMV GVS+GF+++L++ GVGYRA V+G
Subjt:  SRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEG

Query:  KDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGK
        ++LVLN+G+SH V++  PDGIQ  VE NT + VSGYDK  +G  AA +R  RPPEPYKGKG++YA E+VRRK GK GK
Subjt:  KDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGK

Arabidopsis top hitse value%identityAlignment
AT1G05190.1 Ribosomal protein L6 family1.3e-9473.39Show/hide
Query:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA S   S QP          RS FLG++N F VS+ P   +G   KTIECKESRIGKQPI VPS+VTI L+GQDLKVKGPLGEL++ YPREV++ +E+S
Subjt:  MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        G +RVKK +ETRRANQMHGLFRTLTDNMVVGVSKGFEKKL L+GVGYRA V+GK+LVLNLGFSHPV+M IPD +++KVEENTRITVSGYDK  IGQFAA+
Subjt:  GIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        +R+WRPPEPYKGKGVKY+DEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

AT2G18400.1 ribosomal protein L6 family protein9.2e-2144.9Show/hide
Query:  FEKKLQLIGVGYRAMVE--GKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGK
        F + L+++GVGY+A  E  G+ L L LG+SH V +A+P  +++   +N  +  +G DK  + QFAA++R  +PPEPYKGKG+ Y DE+V++K+GK  K
Subjt:  FEKKLQLIGVGYRAMVE--GKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTCTCTTCTCCTCCTTCTCTTCAACCTCCAACTTCGATACACTCACCTAACAACTTTCGGTCTACATTTTTGGGAGAAAAAAATGGATTCTGTGTTTCTGCAAT
GCCTGCATGTCATATTGGTCTGTTGAGGAAGACTATAGAATGCAAGGAATCACGAATAGGGAAGCAACCAATTCAAGTGCCATCCAGTGTAACCATCACATTGCAGGGTC
AGGATTTGAAAGTTAAGGGTCCTTTAGGAGAACTTTCAATTCTTTATCCACGAGAGGTTAAAATTGAGAGGGAAGATTCTGGGATCATAAGAGTTAAGAAAGCACTGGAG
ACAAGAAGAGCCAATCAAATGCATGGACTTTTCAGGACGCTTACAGACAACATGGTGGTAGGAGTATCGAAGGGGTTCGAAAAGAAACTTCAATTGATCGGTGTCGGTTA
TCGAGCAATGGTAGAAGGAAAAGACTTGGTACTAAATCTTGGGTTCTCTCATCCAGTTAGAATGGCGATACCTGATGGGATTCAGATAAAAGTGGAAGAAAACACAAGAA
TTACAGTAAGTGGATATGATAAATGTGCCATTGGTCAGTTTGCTGCCTCTATTAGACAGTGGAGACCCCCAGAACCTTACAAGGGTAAAGGAGTGAAATATGCTGATGAA
ATCGTAAGAAGAAAAGAAGGAAAAGCAGGGAAGAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
AAACGGCCCAATTCAGAATTCTGTCTTCTCCACCTTATCCTTCTCGTCACCTCTTGCCTGCCTGCAAGTCACTGTGTCATCTTCTTCGTAATCGGACCCAAAGGGGGTCT
CTCTCGCTCTTTCACACTTGGGTGTTCTGTTCTCACACTCATAATGGCACTCTCTTCTCCTCCTTCTCTTCAACCTCCAACTTCGATACACTCACCTAACAACTTTCGGT
CTACATTTTTGGGAGAAAAAAATGGATTCTGTGTTTCTGCAATGCCTGCATGTCATATTGGTCTGTTGAGGAAGACTATAGAATGCAAGGAATCACGAATAGGGAAGCAA
CCAATTCAAGTGCCATCCAGTGTAACCATCACATTGCAGGGTCAGGATTTGAAAGTTAAGGGTCCTTTAGGAGAACTTTCAATTCTTTATCCACGAGAGGTTAAAATTGA
GAGGGAAGATTCTGGGATCATAAGAGTTAAGAAAGCACTGGAGACAAGAAGAGCCAATCAAATGCATGGACTTTTCAGGACGCTTACAGACAACATGGTGGTAGGAGTAT
CGAAGGGGTTCGAAAAGAAACTTCAATTGATCGGTGTCGGTTATCGAGCAATGGTAGAAGGAAAAGACTTGGTACTAAATCTTGGGTTCTCTCATCCAGTTAGAATGGCG
ATACCTGATGGGATTCAGATAAAAGTGGAAGAAAACACAAGAATTACAGTAAGTGGATATGATAAATGTGCCATTGGTCAGTTTGCTGCCTCTATTAGACAGTGGAGACC
CCCAGAACCTTACAAGGGTAAAGGAGTGAAATATGCTGATGAAATCGTAAGAAGAAAAGAAGGAAAAGCAGGGAAGAAGAAGTAATGGCTTTGTAAAATTCATTGTTGGT
TTTTTATTCTCTTTTTGAAATATTTGTATTTTTTTTTTCTATTATCAGAAAGGATTATTGTCACATTACTGTTTGACTTCCATTGAATGTGAAAATTTGCTAGAATTCAC
ACCGTAAA
Protein sequenceShow/hide protein sequence
MALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIRVKKALE
TRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADE
IVRRKEGKAGKKK