; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G05120 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G05120
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionglycine-rich RNA-binding protein 2-like
Genome locationChr7:3800438..3801280
RNA-Seq ExpressionCSPI07G05120
SyntenyCSPI07G05120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608571.1 hypothetical protein SDJN03_01913, partial [Cucurbita argyrosperma subsp. sororia]4.0e-5676.67Show/hide
Query:  LVILATVIYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGG-GYGWGWGSGGGGGGGGGGGGGGGGWGWGGGGGGWW
        LV     +YGSR AEGL NG      TFLTFSELP+ NAGE RNSS N+TTVEVSKQN GGGGG G+GWG G GGGGGGGGGGGGGGGGWGWGGGGGGWW
Subjt:  LVILATVIYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGG-GYGWGWGSGGGGGGGGGGGGGGGGWGWGGGGGGWW

Query:  KWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRR
        KWGCGGQPKS R G     G  +NV  KR+Y+E+DY MGEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC RR
Subjt:  KWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRR

KAG7037889.1 hypothetical protein SDJN02_01520, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-5574.05Show/hide
Query:  VILATVIYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGW-------GSGGGGGGGGGGGGGGGGWGWGGG
        +     +YGSR AEGL NG      TFLTFSELP+ NAGE RNSS N+TTVEVSKQN  GGGGGYGWGW       G GGGGGGGGGGGGGGGGWGWGGG
Subjt:  VILATVIYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGW-------GSGGGGGGGGGGGGGGGGWGWGGG

Query:  GGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRR
        GGGWWKWGCGGQPKS R G     G  +NV  KR+Y+E+DY MGEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC RR
Subjt:  GGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRR

XP_008455258.1 PREDICTED: keratin, type II cytoskeletal 1 [Cucumis melo]1.8e-8590.31Show/hide
Query:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQN-GGGGGGGYGWGWGS----GGGGGGGGGGGG
        MGWENPIKLSALVILATVIYGSRAAEGLGNGSMP+NVTFLTFSELPQRNAGERRNSSSN++TVEVSKQN GGGGGGGYGWGWGS    GGGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQN-GGGGGGGYGWGWGS----GGGGGGGGGGGG

Query:  GGGGWGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP
        GGGGWGWGGGGGGWWKWGCGG+PK E+VGRRDDNG  +NVK K+MY+EKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC R P
Subjt:  GGGGWGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP

XP_011659711.1 keratin, type II cytoskeletal 2 epidermal [Cucumis sativus]1.1e-9398.96Show/hide
Query:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGS-GGGGGGGGGGGGGGGG
        MGWENPIKLSALVILATVI GSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGS GGGGGGGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGS-GGGGGGGGGGGGGGGG

Query:  WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP
        WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP
Subjt:  WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP

XP_022940700.1 glycine-rich RNA-binding protein 2-like [Cucurbita moschata]3.7e-5470.41Show/hide
Query:  MGWENPIKLSALVILATV------IYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGW-GSGGGGGGGGGG
        +G +N  ++ A+  +  V      +YGSR AEGL NG      TFLTFSELP  NAGE RNSS N+TTVEVSKQN  GGGGGYGWGW G GGGGGGGGGG
Subjt:  MGWENPIKLSALVILATV------IYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGW-GSGGGGGGGGGG

Query:  GGGGGGWGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNR
        GGGGGGWGWGGGGGGWWKWGCGGQPKS R G     G  +NV  KR+Y+E+DY +GEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCR+MCKAHC R
Subjt:  GGGGGGWGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNR

TrEMBL top hitse value%identityAlignment
A0A0A0K766 Uncharacterized protein5.2e-9498.96Show/hide
Query:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGS-GGGGGGGGGGGGGGGG
        MGWENPIKLSALVILATVI GSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGS GGGGGGGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGS-GGGGGGGGGGGGGGGG

Query:  WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP
        WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP
Subjt:  WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP

A0A1S3C029 keratin, type II cytoskeletal 18.9e-8690.31Show/hide
Query:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQN-GGGGGGGYGWGWGS----GGGGGGGGGGGG
        MGWENPIKLSALVILATVIYGSRAAEGLGNGSMP+NVTFLTFSELPQRNAGERRNSSSN++TVEVSKQN GGGGGGGYGWGWGS    GGGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQN-GGGGGGGYGWGWGS----GGGGGGGGGGGG

Query:  GGGGWGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP
        GGGGWGWGGGGGGWWKWGCGG+PK E+VGRRDDNG  +NVK K+MY+EKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC R P
Subjt:  GGGGWGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP

A0A251R9W7 Uncharacterized protein9.7e-3256.67Show/hide
Query:  LTFSELPQRNAGERRNSSSNSTTVEVSKQN-----------GGGGGGGYGWGWGS-----------GGGGGGGGGGGGGGGGWGWGGGGG--GWWKWGC-
        L  +E+P    G+ RN ++ S T +V   N           GGGGGGGY WGWG            GGGGGGGGGGGGGGGGWGWGGGGG  GWWKWGC 
Subjt:  LTFSELPQRNAGERRNSSSNSTTVEVSKQN-----------GGGGGGGYGWGWGS-----------GGGGGGGGGGGGGGGGWGWGGGGG--GWWKWGC-

Query:  GGQPKSERVGRRDDNGGSRN----VKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRR
        GG+ +  R G R+ +   R+      GKR + E DY +GEFAQCM KGRC+GMRLDCPLHCGGPC+YDC+YMCKAHC RR
Subjt:  GGQPKSERVGRRDDNGGSRN----VKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRR

A0A540M1B0 Uncharacterized protein7.4e-3249.55Show/hide
Query:  KLSALVILATVIYGSRAAEG-LGNGSM--------PMNVTFLTFSELPQRNAGERRNSSSNSTT-VEVSKQ----------------------NGGGGGG
        KL  L+ + T I GS AA G L NG+             + L  +E+P    GE RN +++ TT V+++ +                        GGGGG
Subjt:  KLSALVILATVIYGSRAAEG-LGNGSM--------PMNVTFLTFSELPQRNAGERRNSSSNSTT-VEVSKQ----------------------NGGGGGG

Query:  GYGWGWGSGGGGGGGGGG-----GGGGGGWGWGGGGG--GWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCP
        GY WGWG GGGGGGGGGG     GG GGGWGWGGGGG  GWWKWGCGG     + GR   N        KR + E++Y +GEFAQCM KGRC+GMRLDCP
Subjt:  GYGWGWGSGGGGGGGGGG-----GGGGGGWGWGGGGG--GWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCP

Query:  LHCGGPCFYDCRYMCKAHCNRR
        LHCGGPCFYDC++MCKAHC RR
Subjt:  LHCGGPCFYDCRYMCKAHCNRR

A0A6J1FRC8 glycine-rich RNA-binding protein 2-like1.8e-5470.41Show/hide
Query:  MGWENPIKLSALVILATV------IYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGW-GSGGGGGGGGGG
        +G +N  ++ A+  +  V      +YGSR AEGL NG      TFLTFSELP  NAGE RNSS N+TTVEVSKQN  GGGGGYGWGW G GGGGGGGGGG
Subjt:  MGWENPIKLSALVILATV------IYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGW-GSGGGGGGGGGG

Query:  GGGGGGWGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNR
        GGGGGGWGWGGGGGGWWKWGCGGQPKS R G     G  +NV  KR+Y+E+DY +GEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCR+MCKAHC R
Subjt:  GGGGGGWGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G75550.1 glycine-rich protein8.4e-2049.66Show/hide
Query:  RNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGW-----GSGGGGGGGGGGGGGGGGWGW--GGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRM
        +N     NS++    V   K++  GG G Y WGW     G GGGGGGGGGGGGGGGGWGW  GGGGGGW+KWGCGG             GG    KGK  
Subjt:  RNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGW-----GSGGGGGGGGGGGGGGGGWGW--GGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRM

Query:  YSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNR
            ++   E+A+C  +G+C G RL+CP HCGG CFYDC ++CK HC R
Subjt:  YSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGGGAAAATCCAATCAAATTAAGTGCTTTGGTGATTTTAGCAACAGTGATTTATGGGTCAAGAGCTGCTGAAGGTTTAGGAAATGGAAGTATGCCCATGAATGT
AACTTTCTTAACATTCTCAGAGCTGCCACAGAGGAATGCAGGAGAGAGGAGAAACAGTTCTAGCAATAGTACTACAGTGGAGGTCAGCAAGCAAAACGGGGGAGGAGGCG
GCGGCGGCTATGGATGGGGATGGGGCAGCGGTGGTGGTGGAGGAGGAGGAGGAGGTGGTGGTGGAGGTGGTGGAGGATGGGGATGGGGTGGAGGTGGAGGTGGGTGGTGG
AAATGGGGTTGTGGAGGACAGCCAAAATCCGAGAGAGTTGGACGACGCGACGATAACGGAGGAAGCAGAAATGTGAAGGGAAAGAGAATGTACAGCGAGAAAGATTATAG
AATGGGAGAATTTGCGCAATGTATGGTGAAAGGAAGATGCAGAGGAATGAGATTAGATTGTCCACTCCATTGCGGCGGACCTTGCTTTTATGATTGTCGATACATGTGTA
AAGCTCACTGTAATCGACGCCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTGGGAAAATCCAATCAAATTAAGTGCTTTGGTGATTTTAGCAACAGTGATTTATGGGTCAAGAGCTGCTGAAGGTTTAGGAAATGGAAGTATGCCCATGAATGT
AACTTTCTTAACATTCTCAGAGCTGCCACAGAGGAATGCAGGAGAGAGGAGAAACAGTTCTAGCAATAGTACTACAGTGGAGGTCAGCAAGCAAAACGGGGGAGGAGGCG
GCGGCGGCTATGGATGGGGATGGGGCAGCGGTGGTGGTGGAGGAGGAGGAGGAGGTGGTGGTGGAGGTGGTGGAGGATGGGGATGGGGTGGAGGTGGAGGTGGGTGGTGG
AAATGGGGTTGTGGAGGACAGCCAAAATCCGAGAGAGTTGGACGACGCGACGATAACGGAGGAAGCAGAAATGTGAAGGGAAAGAGAATGTACAGCGAGAAAGATTATAG
AATGGGAGAATTTGCGCAATGTATGGTGAAAGGAAGATGCAGAGGAATGAGATTAGATTGTCCACTCCATTGCGGCGGACCTTGCTTTTATGATTGTCGATACATGTGTA
AAGCTCACTGTAATCGACGCCCTTAGTTTGCATGATCCGCCATAACTTCTACAATAACCACTCTTTAGCTCAACTCATTTTAATTTGACTGCTAATTGATCAAAAGGAAG
TTGATTTTGATTCCAGTCGTTGAAACTCTTTAATTTGTTTAGCTGTTTCACCTTAGTGTGTGGGAGATGAATTGGATTGCTAAGTTTTTGTGAAAGTGTAATATATCATT
TTGCTTGGTTTGGGCAGAGAAATGATTTTCTCTCTTTTCTTTTTTAGCTCAAGTTGAATGTGCAAAATCAGCC
Protein sequenceShow/hide protein sequence
MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGWGWGGGGGGWW
KWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP