; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G05260 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G05260
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGlycine-rich RNA-binding protein
Genome locationChr7:3934915..3937727
RNA-Seq ExpressionCSPI07G05260
SyntenyCSPI07G05260
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136860.1 glycine-rich RNA-binding protein RZ1A [Cucumis sativus]2.0e-10999.53Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYS-GGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY
        GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYS GGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYS-GGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY

Query:  ERRGSGGFRSG
        ERRGSGGFRSG
Subjt:  ERRGSGGFRSG

XP_008455237.1 PREDICTED: glycine-rich RNA-binding protein RZ1A [Cucumis melo]1.6e-10696.73Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGG----GRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRS
        GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR GGRYGGRDDKY GGGGGG    GRYGPDRNGDRFGGRNRS+GDRGGSGSDRYSRDRS
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGG----GRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRS

Query:  GPYERRGSGGFRSG
        GPYERRGSGGFRSG
Subjt:  GPYERRGSGGFRSG

XP_022154392.1 glycine-rich RNA-binding protein RZ1A [Momordica charantia]5.8e-10194.26Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWSTSDR LKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPYE
        GRDHDRDR RDFGG RGSNSGDCFKCGKPGHFARECPSEGGR GGRYGGRDDKYS GGGG GRYGPDRNGDRFGGRNRSSGDRGGSGSDR++RDRSGPYE
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPYE

Query:  RRGSGGFRS
        RR SGGFRS
Subjt:  RRGSGGFRS

XP_022988948.1 glycine-rich RNA-binding protein RZ1A-like [Cucurbita maxima]5.7e-9691.55Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGG--GGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGP
        GRDHDRDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGR GGRYGGRDDKYSGG  GGG GRYGPDRNGDR GGRNR +GDRGGSGSDRYSRDRSGP
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGG--GGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGP

Query:  YERR--GSGGFRS
        YERR  GSGGFRS
Subjt:  YERR--GSGGFRS

XP_038888155.1 glycine-rich RNA-binding protein RZ1A [Benincasa hispida]2.7e-10697.64Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGG--GRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGP
        GRDHDRDRGRD GGARGSNSGDCFKCGKPGHFARECPSEGGR GGRYGGRDDKYSGGGGGG  GRYGPDRNGDRFGGRNRS+GDRGGSGSDRYSRDRSGP
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGG--GRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGP

Query:  YERRGSGGFRSG
        YERRGSGGFRSG
Subjt:  YERRGSGGFRSG

TrEMBL top hitse value%identityAlignment
A0A0A0K5W4 Uncharacterized protein9.7e-11099.53Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYS-GGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY
        GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYS GGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYS-GGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY

Query:  ERRGSGGFRSG
        ERRGSGGFRSG
Subjt:  ERRGSGGFRSG

A0A1S3C164 glycine-rich RNA-binding protein RZ1A7.7e-10796.73Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGG----GRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRS
        GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR GGRYGGRDDKY GGGGGG    GRYGPDRNGDRFGGRNRS+GDRGGSGSDRYSRDRS
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGG----GRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRS

Query:  GPYERRGSGGFRSG
        GPYERRGSGGFRSG
Subjt:  GPYERRGSGGFRSG

A0A6J1DLZ2 glycine-rich RNA-binding protein RZ1A2.8e-10194.26Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWSTSDR LKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPYE
        GRDHDRDR RDFGG RGSNSGDCFKCGKPGHFARECPSEGGR GGRYGGRDDKYS GGGG GRYGPDRNGDRFGGRNRSSGDRGGSGSDR++RDRSGPYE
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPYE

Query:  RRGSGGFRS
        RR SGGFRS
Subjt:  RRGSGGFRS

A0A6J1EI50 glycine-rich RNA-binding protein RZ1A-like8.0e-9691.51Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGG-GRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY
        GRD++RDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGR GGRYGGRDDKYSGGGGGG GRYGPDRNGDR GGRNR +GDRGGSGSDRYSRDRSGPY
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGG-GRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPY

Query:  ERR--GSGGFRS
        ERR  GSGGFRS
Subjt:  ERR--GSGGFRS

A0A6J1JNT9 glycine-rich RNA-binding protein RZ1A-like2.7e-9691.55Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGG--GGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGP
        GRDHDRDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGR GGRYGGRDDKYSGG  GGG GRYGPDRNGDR GGRNR +GDRGGSGSDRYSRDRSGP
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGG--GGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGP

Query:  YERR--GSGGFRS
        YERR  GSGGFRS
Subjt:  YERR--GSGGFRS

SwissProt top hitse value%identityAlignment
P49310 Glycine-rich RNA-binding protein GRP1A8.4e-2644.97Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++K+M +AI+ MNG DLDGRSITV++AQ ++GSG         GG  
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGG-----GGGRYGPDRNGDRFGGRNRSSGDRGGSG
                 GG RG   G  ++ G  G +       GG GG   GGR+  YSGGGG     GGG  G    G R GG     G  GG G
Subjt:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGG-----GGGRYGPDRNGDRFGGRNRSSGDRGGSG

Q03250 Glycine-rich RNA-binding protein 71.1e-2546.24Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ ++GSG    G R  GG  
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR--GGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSG
        +    G  + G  GS  G                  GGR  GGG Y G    YS  GGGGG YG    G R GG     G+ GG G
Subjt:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR--GGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSG

Q05966 Glycine-rich RNA-binding protein 101.4e-2544.12Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        EVEYRCF+GGL+W+T D  L+  F +FG ++++K++ D+ +GRSRGFGFVTF ++K+M +AI  MNG +LDGR+ITV++AQ   G G    G    GGR 
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  -----------HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGG
                    DR  G  +G   G   G  +  G  G+        G R GG YGG D  Y GG GGGG
Subjt:  -----------HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGG

Q43472 Glycine-rich RNA-binding protein blt8016.4e-2648.04Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MAD VEYRCF+GGL W+T D+ L+ AF K+G ++++K++ D+ +GRSRGFGFVTF   +AM +AI+AMNG DLDGR+ITV++AQ      R  DG    G
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR--GGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRN
        G       G  +GG R    G  +  G  G+        GGR  GGG YG RD    G GGGGG YG  R G   GG N
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR--GGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRN

Q9LIN3 Glycine-rich RNA-binding protein RZ1A2.7e-6458.17Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR
        M+++ EYRCFIGGL+W+TSDRGL++AFEK+GHLVEAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR+ITVDKAQP+Q G+GRD+DGDR R
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR

Query:  GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGG-------------------------------------------RYGGRDDKYSG
          R +DRDR R  GG  G   GDCFKCGKPGHFARECPSE  R GG                                           RY  +DD+Y  
Subjt:  GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGG-------------------------------------------RYGGRDDKYSG

Query:  GGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPYERRGSGGF
          GGG RYGPDR+G+R GGR+R  G RG  G +R+SR    PY+R  +GGF
Subjt:  GGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPYERRGSGGF

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 27.8e-2746.24Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ ++GSG    G R  GG  
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR--GGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSG
        +    G  + G  GS  G                  GGR  GGG Y G    YS  GGGGG YG    G R GG     G+ GG G
Subjt:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR--GGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSG

AT2G21660.2 cold, circadian rhythm, and rna binding 29.2e-2848.75Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGDRPRGGR
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ    G G  H G    GG 
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGDRPRGGR

Query:  DHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGG
           R+ G  + G  G  S      G  G   RE    GG GGG  GG    Y G GGGGG
Subjt:  DHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.9e-6558.17Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR
        M+++ EYRCFIGGL+W+TSDRGL++AFEK+GHLVEAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR+ITVDKAQP+Q G+GRD+DGDR R
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR

Query:  GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGG-------------------------------------------RYGGRDDKYSG
          R +DRDR R  GG  G   GDCFKCGKPGHFARECPSE  R GG                                           RY  +DD+Y  
Subjt:  GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGG-------------------------------------------RYGGRDDKYSG

Query:  GGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPYERRGSGGF
          GGG RYGPDR+G+R GGR+R  G RG  G +R+SR    PY+R  +GGF
Subjt:  GGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPYERRGSGGF

AT4G39260.1 cold, circadian rhythm, and RNA binding 13.0e-2644.39Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        EVEYRCF+GGL+W+T+D  L+  F +FG ++++K++ D+ SGRSRGFGFVTF ++KAM +AI+ MNG +LDGR ITV++AQ ++GSG         GG  
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGR---YGPDRNGDRFGGRNRSSGDRGGSG
                 GG RG + G     G  G+         G GGG Y  R   Y  GGGGGGR    G  R G  +GG +  S   GG G
Subjt:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGR---YGPDRNGDRFGGRNRSSGDRGGSG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.5e-2540.8Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA +   R F+GGLS   +DR L+ AF +FG +++ ++++++ +GRSRGFGF+TF +++AMDE+I+ M+G D   R I+V++A+P  G   D +    RG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRD-RGR-DFGGARGS----NSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRD
        GRD      G+  FGG  G        +CFKCG+ GH+AR+CPS GG  GG  GG   + S  GG  GR     + DR+  R R   DR    +   +RD
Subjt:  GRDHDRD-RGR-DFGGARGS----NSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRD

Query:  R
        R
Subjt:  R


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACGAGGTGGAGTATCGCTGCTTTATTGGCGGCCTTTCTTGGTCAACATCTGACAGAGGTCTGAAAGAGGCGTTTGAAAAGTTTGGCCATCTTGTCGAGGCCAA
GGTAGTTGTCGACAAATTTTCTGGACGCTCCCGTGGTTTTGGATTTGTCACTTTTGATGAGAAAAAAGCTATGGATGAGGCAATCAAAGCTATGAATGGAATGGATTTAG
ATGGCCGGAGCATTACAGTTGATAAGGCTCAACCAAACCAAGGTTCTGGTAGAGATCATGATGGTGACCGTCCACGTGGTGGTCGTGATCATGATCGTGATCGGGGTCGT
GATTTTGGTGGTGCACGTGGATCTAACAGTGGGGATTGCTTTAAATGTGGGAAACCTGGACATTTTGCTAGGGAATGTCCCAGTGAAGGTGGTAGAGGAGGTGGTAGGTA
TGGAGGGAGGGATGACAAATATAGTGGTGGCGGCGGTGGCGGTGGTCGATATGGTCCAGACCGAAATGGAGATAGATTCGGTGGGCGCAATAGGAGTTCTGGTGATCGAG
GAGGTTCGGGAAGTGATCGATATAGCCGTGATCGCTCTGGTCCATATGAGCGACGTGGTTCTGGTGGTTTTCGTTCTGGATAG
mRNA sequenceShow/hide mRNA sequence
CTGCCTCTTTGCCCTACACCCCAGTTTCAACCAACATCACCGCCACTTTGCCTTTTCCAGCTTTCAGGTTCTCTCCTGAGCGAATCCAATTCCTAAGGGTTAGGGCTTTC
GTTCTTCACTAATTCTCTCATAATGGCTGACGAGGTGGAGTATCGCTGCTTTATTGGCGGCCTTTCTTGGTCAACATCTGACAGAGGTCTGAAAGAGGCGTTTGAAAAGT
TTGGCCATCTTGTCGAGGCCAAGGTAGTTGTCGACAAATTTTCTGGACGCTCCCGTGGTTTTGGATTTGTCACTTTTGATGAGAAAAAAGCTATGGATGAGGCAATCAAA
GCTATGAATGGAATGGATTTAGATGGCCGGAGCATTACAGTTGATAAGGCTCAACCAAACCAAGGTTCTGGTAGAGATCATGATGGTGACCGTCCACGTGGTGGTCGTGA
TCATGATCGTGATCGGGGTCGTGATTTTGGTGGTGCACGTGGATCTAACAGTGGGGATTGCTTTAAATGTGGGAAACCTGGACATTTTGCTAGGGAATGTCCCAGTGAAG
GTGGTAGAGGAGGTGGTAGGTATGGAGGGAGGGATGACAAATATAGTGGTGGCGGCGGTGGCGGTGGTCGATATGGTCCAGACCGAAATGGAGATAGATTCGGTGGGCGC
AATAGGAGTTCTGGTGATCGAGGAGGTTCGGGAAGTGATCGATATAGCCGTGATCGCTCTGGTCCATATGAGCGACGTGGTTCTGGTGGTTTTCGTTCTGGATAGTATCA
TGACTTTCCTTGTAGGCCAGCTTACATGGTGGGATCTTGCGGTTATGTCCTGCACAGTGTTAATGTTTCTGTCTACAGGTCGTCTCTCGTACAGTTCAGAGTTCTGAAGT
GCAGAGCTCGACGTTAATGTTGAGATATTTGTGTTCCTATGTGATGAATTTGGTATCTTGGTACAGTGGTGTGGTGTCTAATGTGTTCTTGACATATTCATTGAAACCTG
GTTTTATGATCTTTAAGTGCCCTTGTAGCTGCTGCATAACTTGTGACACACACACAGGGAATTTCAATAACTGCTGCACCATTTCATTTTGAAAAAATTTCTTTTAGAAT
ACAACTAGACCTGGTTTTTGATATTGGATGGGTATTGACCATTGAGAGGACCTTGGCTTTTGATAAGCTGCAACTAGAGATTTGTGTCCTGACTTGGAAACTTTGAAGTG
AAATCTCCTTTTCAGAACGTTGGTTCCTATTGTCTTATAAATTCCACATGAGTTAACAGCATCCTTCCTTTTTATGGTCTTATTGGGTGCATAATACAGTTTCTTGTTAA
TTGGGCGCTTTAAACTTAAAAATTTACCAAAGCCTTTGGGATGCTCAAGCAATTTTGCAAATAAACTCACTTAATCTTCAAATACGTCCTGCTGGCTTATGGTTGAGGGG
TATTTCATGTGCTAAAATGCTCGGCAAGTTGTGTTTGGACCATCTTTTGCACTTACGGTTCTATTTCCACTTTGTTCTTGTTGGGGGAGACTTTTGATGTGTTCGTTCTT
GCCTGTTGTGGATCTCTACTTGTTCTTGGTTTTGTTTGCGGAGATTAATTCAGATGTGTGATTCTCTGTGCATCCAAGGTTTTCATTCAAAGTTTATTTGGAGTTTCTAT
AATGATCGTCCCTTTCATCATCTGGATCAGTTTGGTTTCAAATCCATTGATTGTTCTTTCTCTCCTCCAAATGTGATCAAAGGACCCGTTTCGCGTCTCCTGTAATTTTT
ACTCATATGTATCTCAATTTTTCATCCTTGTTTGCTGCCATGATGAATGTGTTACAACAATTAATGTTTAGCAATTATATTTTGAATTTCTTTGGCCTTTTTTTCTCTCC
ATTTCATGGTTTCTTTTCCATGGTCGTGTTCTTGTACCAATCCTTATCCTGGAAGGGATGGATTTTTTTCCTTCTACTTTTTGTGGCCCTAAACATTTTCAAGCTGTAAA
CTTTTTTTATGGTGATGTGCA
Protein sequenceShow/hide protein sequence
MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRDHDRDRGR
DFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPYERRGSGGFRSG