CuGenDBv2

Gene ID	CSPI07G05720
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DNA repair protein XRCC4
Genome location	Chr7:4280543..4284277
RNA-Seq Expression	CSPI07G05720
Synteny	CSPI07G05720
Gene Ontology terms	GO:0006303 - double-strand break repair via nonhomologous end joining (biological process) GO:0006310 - DNA recombination (biological process) GO:0010165 - response to X-ray (biological process) GO:0051103 - DNA ligation involved in DNA repair (biological process) GO:0051351 - positive regulation of ligase activity (biological process) GO:0005958 - DNA-dependent protein kinase-DNA ligase 4 complex (cellular component) GO:0032807 - DNA ligase IV complex (cellular component) GO:0003677 - DNA binding (molecular function) GO:0016874 - ligase activity (molecular function)
InterPro domains	IPR010585 - DNA repair protein XRCC4 IPR014751 - DNA repair protein XRCC4-like, C-terminal IPR038051 - XRCC4-like, N-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6571850.1 DNA repair protein XRCC4, partial [Cucurbita argyrosperma subsp. sororia]

6.1e-107

84.12

Show/hide

Query:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS
        MDAIRHTCLKLEVPTNAQP+ R SIFVKGTW   RFDLSITDG +AWTCHATEDEVRLRA QWDQEPSDYV+LAERYLGFQQP S+Y FAD GNG KRLS
Subjt:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS

Query:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ
        WTF+KEGMKLEWRWKC+ ASDNKTTTAGIL+FLMDANIRLSEEVVRK QS E+LK ESEKCLAQSE+IC+EKVEFETA+YAKFLNVLN KKAKLREYRDQ
Subjt:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ

Query:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN
          +QT T SKLKQ++  SDKTESFDD+SDAEKN
Subjt:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN

XP_004136882.1 DNA repair protein XRCC4 [Cucumis sativus]

4.3e-129

100

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Query:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS
        MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS
Subjt:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS

Query:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ
        WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ
Subjt:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ

Query:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN
        LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN
Subjt:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN

XP_008455175.1 PREDICTED: DNA repair protein XRCC4 [Cucumis melo]

1.2e-123

96.57

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Query:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS
        MDAIRHTCLKLEVPTNAQP+ERSSIFVKGTWNH RFDLSITDG HAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIY FADAGNGYKRLS
Subjt:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS

Query:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ
        WTFDKEGMKLEWRWKCQPASDNKTTTA ILNFLMDANIRLSEEVVRK QSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ
Subjt:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ

Query:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN
        LS+QT TGSKLKQEEYSSDKTESFDDESDAEKN
Subjt:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN

XP_022971995.1 DNA repair protein XRCC4 isoform X1 [Cucurbita maxima]

1.2e-107

84.55

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Query:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS
        MDAIRHTCLKLEVPTNAQP+ R SIFVKGTW   RFDLSITDG +AWTCHATEDEVRLRA QWDQEPSDYV LAERYLGFQQP S+YDFAD GNG KRLS
Subjt:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS

Query:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ
        WTF+KEGMKLEWRWKC+ ASDNKTTTAGIL+FLMDANIRLSEEVVRK QS E+LK ESEKCLAQSE+IC+EKVEFETA+YAKFLNVLN KKAKLREYRDQ
Subjt:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ

Query:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN
          +QT T SKLKQ++  SDKTESFDD+SDAEKN
Subjt:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN

XP_038888651.1 DNA repair protein XRCC4 [Benincasa hispida]

1.9e-116

90.56

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Query:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS
        MDA RHTCLKLEVPTNAQPN+RSSIFVKGTWNH  FDLSITDG +AW+CHATEDEV LRAAQWDQEPSDYVALAERYLGFQQPGS+Y F DAGNG +RLS
Subjt:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS

Query:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ
        WTFDKEGMKLEWRWKC+PASDNKTTTAGIL+FLMDANIRLSEEVVRK Q  ERLK+ESE+CLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ
Subjt:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ

Query:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN
        LS+QT TGSKLKQEEYSSDKTESFDDESDAEKN
Subjt:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K2L2 Uncharacterized protein

2.1e-129

100

Show/hide

Query:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS
        MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS
Subjt:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS

Query:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ
        WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ
Subjt:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ

Query:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN
        LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN
Subjt:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN

A0A1S3BZW1 DNA repair protein XRCC4

5.9e-124

96.57

Show/hide

Query:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS
        MDAIRHTCLKLEVPTNAQP+ERSSIFVKGTWNH RFDLSITDG HAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIY FADAGNGYKRLS
Subjt:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS

Query:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ
        WTFDKEGMKLEWRWKCQPASDNKTTTA ILNFLMDANIRLSEEVVRK QSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ
Subjt:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ

Query:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN
        LS+QT TGSKLKQEEYSSDKTESFDDESDAEKN
Subjt:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN

A0A5A7SK69 DNA repair protein XRCC4

5.9e-124

96.57

Show/hide

Query:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS
        MDAIRHTCLKLEVPTNAQP+ERSSIFVKGTWNH RFDLSITDG HAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIY FADAGNGYKRLS
Subjt:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS

Query:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ
        WTFDKEGMKLEWRWKCQPASDNKTTTA ILNFLMDANIRLSEEVVRK QSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ
Subjt:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ

Query:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN
        LS+QT TGSKLKQEEYSSDKTESFDDESDAEKN
Subjt:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN

A0A6J1GJL0 DNA repair protein XRCC4

2.9e-107

84.12

Show/hide

Query:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS
        MDAIRHTCLKLEVPTNAQP+ R SIFVKGTW   RFDLSITDG +AWTCHATEDEVRLRA QWDQEPSDYV+LAERYLGFQQP S+Y FAD GNG KRLS
Subjt:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS

Query:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ
        WTF+KEGMKLEWRWKC+ ASDNKTTTAGIL+FLMDANIRLSEEVVRK QS E+LK ESEKCLAQSE+IC+EKVEFETA+YAKFLNVLN KKAKLREYRDQ
Subjt:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ

Query:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN
          +QT T SKLKQ++  SDKTESFDD+SDAEKN
Subjt:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN

A0A6J1I7A5 DNA repair protein XRCC4 isoform X1

5.9e-108

84.55

Show/hide

Query:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS
        MDAIRHTCLKLEVPTNAQP+ R SIFVKGTW   RFDLSITDG +AWTCHATEDEVRLRA QWDQEPSDYV LAERYLGFQQP S+YDFAD GNG KRLS
Subjt:  MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLS

Query:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ
        WTF+KEGMKLEWRWKC+ ASDNKTTTAGIL+FLMDANIRLSEEVVRK QS E+LK ESEKCLAQSE+IC+EKVEFETA+YAKFLNVLN KKAKLREYRDQ
Subjt:  WTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQ

Query:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN
          +QT T SKLKQ++  SDKTESFDD+SDAEKN
Subjt:  LSRQTITGSKLKQEEYSSDKTESFDDESDAEKN

SwissProt top hits

e value

%identity

Alignment

Q13426 DNA repair protein XRCC4

1.2e-04

25.47

Show/hide

Query:  FDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVA-LAERYLGFQQPGSIYDFADAGNGYKRLSWTFDKEGMK-LEWR---WKCQPASDNKTTTAGIL
        F +++TDG  AWT   +E E+   A     E   YV  L +  L    P  +Y F    N  K   + F ++ +K + +R   +  +   +       ++
Subjt:  FDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVA-LAERYLGFQQPGSIYDFADAGNGYKRLSWTFDKEGMK-LEWR---WKCQPASDNKTTTAGIL

Query:  NFLMDA---NIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLSRQTITGSK-LKQE-------EYSSD
         + +D    N   +E + ++N   ERL  +      + EK    K   ET +Y +F+ VLN KK K+R   ++L        K +KQE       E ++D
Subjt:  NFLMDA---NIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLSRQTITGSK-LKQE-------EYSSD

Query:  KTESFDDESDAE
        +   +D+ +D E
Subjt:  KTESFDDESDAE

Q682V0 DNA repair protein XRCC4

4.5e-73

60.87

Show/hide

Query:  RHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFD
        +HTCL+LE+ + A P     IFVKGTW++ RFD+S+TDG  +W C+ATE+EV  RAAQWDQ  S+Y+ LAE+YLGFQQP S+Y F+DA  G KRLSWTF+
Subjt:  RHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFD

Query:  KEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLSRQ
        KEG KLEWRWKC+P+ D+K  T GIL+FLM+ANIRLSEEVV K +S E++++E+E+CLAQ EK+CDEK EFE+A YAKFL+VLNAKKAKLR  RD+    
Subjt:  KEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLSRQ

Query:  TITGSKLKQEEYSSDKTESFDD-ESDAEKN
             ++ +EE S+DK ESF+   SD EK+
Subjt:  TITGSKLKQEEYSSDKTESFDD-ESDAEKN

Arabidopsis top hits

e value

%identity

Alignment

AT1G61410.1 DNA double-strand break repair and VJ recombination XRCC4

2.1e-20

56.73

Show/hide

Query:  MDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLSRQTITGSKLKQEEYSSDKTESF-----DDES
        M+ANIRLSEEVV K +S E++K+E+E+CLAQ EK+CDEK EFE A YAKFL+VLNAKKAKLR  RD+         +  +EE S+ K ESF     DDE 
Subjt:  MDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLSRQTITGSKLKQEEYSSDKTESF-----DDES

Query:  DAEK
          E+
Subjt:  DAEK

AT3G23100.1 homolog of human DNA ligase iv-binding protein XRCC4

3.2e-74

60.87

Show/hide

Query:  RHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFD
        +HTCL+LE+ + A P     IFVKGTW++ RFD+S+TDG  +W C+ATE+EV  RAAQWDQ  S+Y+ LAE+YLGFQQP S+Y F+DA  G KRLSWTF+
Subjt:  RHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFD

Query:  KEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLSRQ
        KEG KLEWRWKC+P+ D+K  T GIL+FLM+ANIRLSEEVV K +S E++++E+E+CLAQ EK+CDEK EFE+A YAKFL+VLNAKKAKLR  RD+    
Subjt:  KEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLSRQ

Query:  TITGSKLKQEEYSSDKTESFDD-ESDAEKN
             ++ +EE S+DK ESF+   SD EK+
Subjt:  TITGSKLKQEEYSSDKTESFDD-ESDAEKN

AT3G23100.2 homolog of human DNA ligase iv-binding protein XRCC4

3.2e-74

60.87

Show/hide

Query:  RHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFD
        +HTCL+LE+ + A P     IFVKGTW++ RFD+S+TDG  +W C+ATE+EV  RAAQWDQ  S+Y+ LAE+YLGFQQP S+Y F+DA  G KRLSWTF+
Subjt:  RHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFD

Query:  KEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLSRQ
        KEG KLEWRWKC+P+ D+K  T GIL+FLM+ANIRLSEEVV K +S E++++E+E+CLAQ EK+CDEK EFE+A YAKFL+VLNAKKAKLR  RD+    
Subjt:  KEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLSRQ

Query:  TITGSKLKQEEYSSDKTESFDD-ESDAEKN
             ++ +EE S+DK ESF+   SD EK+
Subjt:  TITGSKLKQEEYSSDKTESFDD-ESDAEKN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACGCAATCAGGCACACATGCCTGAAGCTTGAAGTTCCAACCAACGCCCAGCCGAACGAAAGAAGCTCCATCTTCGTCAAAGGCACTTGGAATCATCTCCGCTTCGA
TCTCTCCATCACCGACGGCTTCCACGCTTGGACGTGCCATGCGACGGAGGACGAGGTTCGGTTGCGCGCTGCACAATGGGACCAAGAACCCTCGGACTATGTGGCATTGG
CAGAGCGCTATTTAGGGTTTCAACAGCCTGGTTCGATCTATGACTTTGCCGATGCTGGAAATGGGTACAAGAGGCTTTCTTGGACATTTGACAAAGAAGGGATGAAGTTA
GAATGGCGATGGAAGTGTCAACCAGCGTCTGATAATAAGACCACTACAGCAGGAATATTGAACTTTCTTATGGATGCAAACATAAGGCTGAGCGAAGAGGTTGTGAGAAA
AAATCAATCAGTTGAGAGGCTGAAGGCGGAATCTGAGAAGTGTTTAGCTCAGAGTGAGAAGATTTGTGATGAAAAGGTGGAGTTTGAAACTGCAATATATGCAAAGTTTC
TGAATGTCTTGAACGCAAAGAAGGCAAAGCTTAGAGAGTACAGAGATCAGCTTTCAAGACAAACCATTACTGGTAGCAAACTGAAACAAGAAGAGTACTCCTCTGATAAA
ACCGAATCTTTCGACGATGAAAGCGATGCAGAAAAGAACTGA

mRNA sequence

Show/hide mRNA sequence

GGACAACTTCTTAAAAAACATACAATAATTTAACGCGCCATAGGAACAGTCGGAAGCTCCATTTTGAAGGCGCGAAGTCAAAACAGCTCCATGGACGCAATCAGGCACAC
ATGCCTGAAGCTTGAAGTTCCAACCAACGCCCAGCCGAACGAAAGAAGCTCCATCTTCGTCAAAGGCACTTGGAATCATCTCCGCTTCGATCTCTCCATCACCGACGGCT
TCCACGCTTGGACGTGCCATGCGACGGAGGACGAGGTTCGGTTGCGCGCTGCACAATGGGACCAAGAACCCTCGGACTATGTGGCATTGGCAGAGCGCTATTTAGGGTTT
CAACAGCCTGGTTCGATCTATGACTTTGCCGATGCTGGAAATGGGTACAAGAGGCTTTCTTGGACATTTGACAAAGAAGGGATGAAGTTAGAATGGCGATGGAAGTGTCA
ACCAGCGTCTGATAATAAGACCACTACAGCAGGAATATTGAACTTTCTTATGGATGCAAACATAAGGCTGAGCGAAGAGGTTGTGAGAAAAAATCAATCAGTTGAGAGGC
TGAAGGCGGAATCTGAGAAGTGTTTAGCTCAGAGTGAGAAGATTTGTGATGAAAAGGTGGAGTTTGAAACTGCAATATATGCAAAGTTTCTGAATGTCTTGAACGCAAAG
AAGGCAAAGCTTAGAGAGTACAGAGATCAGCTTTCAAGACAAACCATTACTGGTAGCAAACTGAAACAAGAAGAGTACTCCTCTGATAAAACCGAATCTTTCGACGATGA
AAGCGATGCAGAAAAGAACTGACAAAGTGGTATAACTTCCGGATCAAGGAATGTTACATGAAATAAGTTGGATTTGTTATATGTGATAGTATGTTAAATTTGGAGATTGA
GGATTTGAATCTTGTACTAATGAGCTATGTTTATAGAAACAGCAACAACACTGATTACTACACTTTTGAAAAAAGTATATTATTGCTGGATTTTGGGTTTGGCT

Protein sequence

Show/hide protein sequence

MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFDKEGMKL
EWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLSRQTITGSKLKQEEYSSDK
TESFDDESDAEKN

CSPI07G05720 (gene) of Cucumber (PI 183967) v1 genome