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CSPI07G05780 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G05780
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionextensin-like
Genome locationChr7:4322762..4323192
RNA-Seq ExpressionCSPI07G05780
SyntenyCSPI07G05780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576849.1 hypothetical protein SDJN03_24423, partial [Cucurbita argyrosperma subsp. sororia]4.3e-0436.52Show/hide
Query:  LLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQP----------------PTPSHETEPSTPP------------------------
        +LN + AA LL SAAA SP PSP+P+P    SPPW+W P T+ P+ P                P PS +T P++PP                        
Subjt:  LLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQP----------------PTPSHETEPSTPP------------------------

Query:  PSPTSVPPPAHHDEPPT--------AQPVSPSPSPTWIAEPPSEALSPSKAKSD--GFKNSFSVVGSVAIGAMAAAAL
        PS T  P PA     PT        A PVS  P+P    EPP+ +++P+  K+D  G  N F++ GSVA G MAAA +
Subjt:  PSPTSVPPPAHHDEPPT--------AQPVSPSPSPTWIAEPPSEALSPSKAKSD--GFKNSFSVVGSVAIGAMAAAAL

KAG7014869.1 hypothetical protein SDJN02_22499, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-0436.52Show/hide
Query:  LLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQP----------------PTPSHETEPSTPP------------------------
        +LN + AA LL SAAA SP PSP+P+P    SPPW+W P T+ P+ P                P PS +T P++PP                        
Subjt:  LLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQP----------------PTPSHETEPSTPP------------------------

Query:  PSPTSVPPPAHHDEPPT--------AQPVSPSPSPTWIAEPPSEALSPSKAKSD--GFKNSFSVVGSVAIGAMAAAAL
        PS T  P PA     PT        A PVS  P+P    EPP+ +++P+  K+D  G  N F++ GSVA G MAAA +
Subjt:  PSPTSVPPPAHHDEPPT--------AQPVSPSPSPTWIAEPPSEALSPSKAKSD--GFKNSFSVVGSVAIGAMAAAAL

XP_011659717.1 vegetative cell wall protein gp1 [Cucumis sativus]2.3e-5898.51Show/hide
Query:  MPHSLLLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQPPTPSHETEPSTPPPSPTSVPPPAHHDEPPTAQPVSPSPSPTWIAEPPS
        MPHSLLLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQPPTPSHETEPSTPPPSPTSVPPPAHHDEPPTAQP SPSPSPTWIAEPPS
Subjt:  MPHSLLLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQPPTPSHETEPSTPPPSPTSVPPPAHHDEPPTAQPVSPSPSPTWIAEPPS

Query:  EALSPSKAKSDGFKNSFSVVGSVAIGAMAAAALL
        EALSPSKAKSDGFKNSFS+VGSVAIGAMAAAALL
Subjt:  EALSPSKAKSDGFKNSFSVVGSVAIGAMAAAALL

XP_022141995.1 extensin-like [Momordica charantia]2.3e-1855.7Show/hide
Query:  LAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQP----PTPSHE-TEPSTPPPSP---TSVPPPAHHDEPPTAQPVSP--------------
        +AAALL SAAA +P P+PSP+P A+ SPPWRW P  KPPT P    P PS + T PS+P PSP   T+V PPA    PPTA PVSP              
Subjt:  LAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQP----PTPSHE-TEPSTPPPSP---TSVPPPAHHDEPPTAQPVSP--------------

Query:  ---SPSPTWIAEPPSEALSPSKAKSDGFKNSFSVVGSVAIGAMAAAALL
           +P+P+WIA PP++AL+PSK KS+  KN FS+VGSV IGAMAAAALL
Subjt:  ---SPSPTWIAEPPSEALSPSKAKSDGFKNSFSVVGSVAIGAMAAAALL

XP_038887113.1 anther-specific proline-rich protein APG-like [Benincasa hispida]8.5e-2965.36Show/hide
Query:  MPHSLLLNALLAAALLFSAAAI-SPSPSPSP--TPPASLSPPWRWAPITKPPTQPPTPSHETEPSTPP------PSPTSVPPPAHHDEPPTAQPV-----
        MPHS LLNALLAAALLFSAAA  +P+PSP+P  TPPAS SPPWRW PITKPP    TPSHE++P+ PP      PSPT V PP HH   PT +PV     
Subjt:  MPHSLLLNALLAAALLFSAAAI-SPSPSPSP--TPPASLSPPWRWAPITKPPTQPPTPSHETEPSTPP------PSPTSVPPPAHHDEPPTAQPV-----

Query:  -----SPSPSPTWIAEPPSEALSPSKAKSDGFKNSFSVVGSVAIGAMAAAALL
             SPSPSP+WIA PP EA +PSKAKSD F N FSVV SVAI AMAAA LL
Subjt:  -----SPSPSPTWIAEPPSEALSPSKAKSDGFKNSFSVVGSVAIGAMAAAALL

TrEMBL top hitse value%identityAlignment
A0A0A0K238 Uncharacterized protein1.1e-5898.51Show/hide
Query:  MPHSLLLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQPPTPSHETEPSTPPPSPTSVPPPAHHDEPPTAQPVSPSPSPTWIAEPPS
        MPHSLLLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQPPTPSHETEPSTPPPSPTSVPPPAHHDEPPTAQP SPSPSPTWIAEPPS
Subjt:  MPHSLLLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQPPTPSHETEPSTPPPSPTSVPPPAHHDEPPTAQPVSPSPSPTWIAEPPS

Query:  EALSPSKAKSDGFKNSFSVVGSVAIGAMAAAALL
        EALSPSKAKSDGFKNSFS+VGSVAIGAMAAAALL
Subjt:  EALSPSKAKSDGFKNSFSVVGSVAIGAMAAAALL

A0A6J1CJN4 extensin-like1.1e-1855.7Show/hide
Query:  LAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQP----PTPSHE-TEPSTPPPSP---TSVPPPAHHDEPPTAQPVSP--------------
        +AAALL SAAA +P P+PSP+P A+ SPPWRW P  KPPT P    P PS + T PS+P PSP   T+V PPA    PPTA PVSP              
Subjt:  LAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQP----PTPSHE-TEPSTPPPSP---TSVPPPAHHDEPPTAQPVSP--------------

Query:  ---SPSPTWIAEPPSEALSPSKAKSDGFKNSFSVVGSVAIGAMAAAALL
           +P+P+WIA PP++AL+PSK KS+  KN FS+VGSV IGAMAAAALL
Subjt:  ---SPSPTWIAEPPSEALSPSKAKSDGFKNSFSVVGSVAIGAMAAAALL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCACTCTCTCCTTCTCAACGCCCTCTTAGCGGCAGCGCTGCTCTTCTCCGCCGCTGCCATATCCCCGTCCCCGTCCCCGTCGCCCACTCCTCCTGCCTCCCTTTC
CCCTCCCTGGAGATGGGCTCCCATCACCAAGCCTCCTACCCAACCACCAACGCCGTCCCATGAAACCGAGCCCAGTACTCCACCGCCGTCGCCTACTTCAGTTCCGCCGC
CGGCCCATCACGATGAGCCACCAACTGCACAACCAGTTTCCCCTTCTCCGTCTCCGACGTGGATTGCCGAACCGCCTTCGGAAGCACTGTCGCCGTCGAAAGCAAAGAGT
GATGGGTTTAAGAACAGCTTCTCGGTGGTAGGATCGGTGGCTATTGGAGCAATGGCTGCTGCTGCTCTCCTTTGA
mRNA sequenceShow/hide mRNA sequence
CAAAACCAATCCCCTTCTCAATTACAATGCCTCACTCTCTCCTTCTCAACGCCCTCTTAGCGGCAGCGCTGCTCTTCTCCGCCGCTGCCATATCCCCGTCCCCGTCCCCG
TCGCCCACTCCTCCTGCCTCCCTTTCCCCTCCCTGGAGATGGGCTCCCATCACCAAGCCTCCTACCCAACCACCAACGCCGTCCCATGAAACCGAGCCCAGTACTCCACC
GCCGTCGCCTACTTCAGTTCCGCCGCCGGCCCATCACGATGAGCCACCAACTGCACAACCAGTTTCCCCTTCTCCGTCTCCGACGTGGATTGCCGAACCGCCTTCGGAAG
CACTGTCGCCGTCGAAAGCAAAGAGTGATGGGTTTAAGAACAGCTTCTCGGTGGTAGGATCGGTGGCTATTGGAGCAATGGCTGCTGCTGCTCTCCTTTGA
Protein sequenceShow/hide protein sequence
MPHSLLLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQPPTPSHETEPSTPPPSPTSVPPPAHHDEPPTAQPVSPSPSPTWIAEPPSEALSPSKAKS
DGFKNSFSVVGSVAIGAMAAAALL