; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G05790 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G05790
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr7:4324383..4324999
RNA-Seq ExpressionCSPI07G05790
SyntenyCSPI07G05790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011659718.1 classical arabinogalactan protein 10 [Cucumis sativus]2.8e-4399.07Show/hide
Query:  MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPHNSPILSHKSVSSPSPSPSPSPVASSSLPPANALAPALLFNDAITNTFAVSASLFTAV
        MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPHNSPILSHKSVSSPSPSPSPSPVASSSLPPANALAPALLFNDAITNTFAVSASLFTAV
Subjt:  MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPHNSPILSHKSVSSPSPSPSPSPVASSSLPPANALAPALLFNDAITNTFAVSASLFTAV

Query:  STAAFLF
        S AAFLF
Subjt:  STAAFLF
TrEMBL top hitse value%identityAlignment
A0A0A0K7F2 Uncharacterized protein1.4e-4399.07Show/hide
Query:  MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPHNSPILSHKSVSSPSPSPSPSPVASSSLPPANALAPALLFNDAITNTFAVSASLFTAV
        MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPHNSPILSHKSVSSPSPSPSPSPVASSSLPPANALAPALLFNDAITNTFAVSASLFTAV
Subjt:  MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPHNSPILSHKSVSSPSPSPSPSPVASSSLPPANALAPALLFNDAITNTFAVSASLFTAV

Query:  STAAFLF
        S AAFLF
Subjt:  STAAFLF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCTCCCCATCACACTTATGGCACTAACGGCCTTATTTCTCATCACCTCCACCTTCGCTCAGTCTCCAGCCCCGTCGCCCAAGAAATCACACCACCCCCACTC
CCACTCTCCCTCTCCCCATAATTCCCCTATCCTTTCTCACAAATCGGTGTCTTCACCTTCGCCTTCACCGTCGCCTTCTCCAGTCGCTTCTTCCTCACTCCCTCCGGCCA
ATGCTCTTGCTCCTGCTCTTCTCTTTAATGATGCTATTACCAATACTTTTGCTGTCTCGGCTTCTCTCTTCACCGCCGTCTCCACCGCTGCTTTCCTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ACAAAACTCCCTTCCAACTTCACAACCTCTCTCTCTCCACATCCATCAATGGCTTCCCTCCCCATCACACTTATGGCACTAACGGCCTTATTTCTCATCACCTCCACCTT
CGCTCAGTCTCCAGCCCCGTCGCCCAAGAAATCACACCACCCCCACTCCCACTCTCCCTCTCCCCATAATTCCCCTATCCTTTCTCACAAATCGGTGTCTTCACCTTCGC
CTTCACCGTCGCCTTCTCCAGTCGCTTCTTCCTCACTCCCTCCGGCCAATGCTCTTGCTCCTGCTCTTCTCTTTAATGATGCTATTACCAATACTTTTGCTGTCTCGGCT
TCTCTCTTCACCGCCGTCTCCACCGCTGCTTTCCTCTTCTAGATCTCCACTCCTTCTCCTTTCTACGTGCTAATTACACATTTCTCTATTCCCTCTTTTTAAATATTTTT
GCTCGCATAGTTTCTAAGGCATGGTGGAGTTTTGAGTTTGTAAAACATTTTCTTCTTTATTTGAATTTATCATATAAACTTTATTTCTATTTATTCTGATTAACTCATAT
CGATTCGAATTTTTTAGTCGTGTTTGCTCCAATAAAAACGTAATACATCAATAGTATTAAGAAGAGT
Protein sequenceShow/hide protein sequence
MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPHNSPILSHKSVSSPSPSPSPSPVASSSLPPANALAPALLFNDAITNTFAVSASLFTAVSTAAFLF