; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G05940 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G05940
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionMADS-box protein JOINTLESS-like isoform X2
Genome locationChr7:4450157..4452694
RNA-Seq ExpressionCSPI07G05940
SyntenyCSPI07G05940
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002487 - Transcription factor, K-box


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136891.2 MADS-box protein SVP isoform X1 [Cucumis sativus]2.3e-4098.94Show/hide
Query:  EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI
        EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK+
Subjt:  EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI

XP_008455140.1 PREDICTED: MADS-box protein SVP-like isoform X1 [Cucumis melo]1.0e-3793.62Show/hide
Query:  EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI
        EILERHN+VHS+NLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKN++LLS IGRK+
Subjt:  EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI

XP_008455141.1 PREDICTED: MADS-box protein JOINTLESS-like isoform X2 [Cucumis melo]3.6e-3872.26Show/hide
Query:  EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK-------
        EILERHN+VHS+NLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKN++LLS IGRK       
Subjt:  EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK-------

Query:  --IIAGVAFGPIEIV-SNTTNDVDVQPDLGSQCTSLK
          I+  +     E V +N+T+  +   D  S  TSLK
Subjt:  --IIAGVAFGPIEIV-SNTTNDVDVQPDLGSQCTSLK

XP_031744925.1 MADS-box protein SVP isoform X2 [Cucumis sativus]2.3e-4098.94Show/hide
Query:  EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI
        EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK+
Subjt:  EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI

XP_038886864.1 MADS-box protein SVP-like isoform X3 [Benincasa hispida]5.2e-3792.47Show/hide
Query:  ILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI
        ILERHNSV+SENLPNLNEPSVELQLESNIRAKLNEEVEKK+HELRQMKGEELQGLGM+ELKKLEKSLQG LSRVAEIMDG+NTDL+SDIGRK+
Subjt:  ILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI

TrEMBL top hitse value%identityAlignment
A0A1S3BZT6 MADS-box protein JOINTLESS-like isoform X21.7e-3872.26Show/hide
Query:  EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK-------
        EILERHN+VHS+NLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKN++LLS IGRK       
Subjt:  EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK-------

Query:  --IIAGVAFGPIEIV-SNTTNDVDVQPDLGSQCTSLK
          I+  +     E V +N+T+  +   D  S  TSLK
Subjt:  --IIAGVAFGPIEIV-SNTTNDVDVQPDLGSQCTSLK

A0A1S3C1G2 MADS-box protein SVP-like isoform X15.1e-3893.62Show/hide
Query:  EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI
        EILERHN+VHS+NLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKN++LLS IGRK+
Subjt:  EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI

A0A6J1CKS2 MADS-box protein JOINTLESS-like isoform X11.8e-3585.42Show/hide
Query:  MLEILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI
        M  +LERHNSVHSENLPNLNEPSVELQLESN+RAKLNEEVEKK+HELRQMKGEELQGLGMEELKKLEKSLQGGL+RV+E+MDG+N DL+ DI RK+
Subjt:  MLEILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI

A0A6J1CLA0 MADS-box protein JOINTLESS-like isoform X21.8e-3585.42Show/hide
Query:  MLEILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI
        M  +LERHNSVHSENLPNLNEPSVELQLESN+RAKLNEEVEKK+HELRQMKGEELQGLGMEELKKLEKSLQGGL+RV+E+MDG+N DL+ DI RK+
Subjt:  MLEILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI

A0A6J1IA12 MADS-box protein JOINTLESS-like isoform X23.4e-3484.95Show/hide
Query:  ILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI
        +LE+H+SVHSENLPNLNEPSVE QLESNIRAKLNEEVEKK HELRQMKGEELQGLG+EELKKLEKSL GGLSRVAE+MDG+N +L+ DIGRK+
Subjt:  ILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI

SwissProt top hitse value%identityAlignment
O82794 MADS-box protein AGL242.8e-0947.5Show/hide
Query:  MLEILERHNSVHSENLPNL-NEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAE
        M +IL R+ S+H+ N+  L + PS  L+LE+   ++L++EVE K+ +LR+++GE+L GL +EEL++LEK L+ GLSRV+E
Subjt:  MLEILERHNSVHSENLPNL-NEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAE

Q5K4R0 MADS-box transcription factor 471.2e-0741.67Show/hide
Query:  MLEILERHNSVHSENLPNLNEPSVELQLE-SNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK
        M +I++R+NS HS+ L       ++LQ E S+  A+L EE+ + S  LRQM+GEEL  L +E+L++LEKSL+ GL  V +    K  D +  + RK
Subjt:  MLEILERHNSVHSENLPNLNEPSVELQLE-SNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK

Q9FUY6 MADS-box protein JOINTLESS2.9e-1457.5Show/hide
Query:  MLEILERHNSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAE
        M +ILER + +HS+NL  L++PS+ELQL E++  ++L++E+ +KSH LRQM+GEELQGL +EEL++LE+SL+ GLSRV E
Subjt:  MLEILERHNSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAE

Q9FVC1 MADS-box protein SVP6.9e-1651.04Show/hide
Query:  MLEILERHNSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK
        M E+LERHN + S+NL  L++PS+ELQL E++  A++++E+  KSH LRQM+GEELQGL +EEL++LEK+L+ GL+RV E    K    +S++ +K
Subjt:  MLEILERHNSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK

Q9XJ66 MADS-box transcription factor 223.5e-1244.21Show/hide
Query:  MLEILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK
        M EI++++N+ HS NL    +PS++L LE +  A LNE++ + S  LRQM+GEEL+GL ++EL++LEK+L+ GL RV    D +  + +S++ RK
Subjt:  MLEILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK

Arabidopsis top hitse value%identityAlignment
AT2G22540.1 K-box region and MADS-box transcription factor family protein4.9e-1751.04Show/hide
Query:  MLEILERHNSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK
        M E+LERHN + S+NL  L++PS+ELQL E++  A++++E+  KSH LRQM+GEELQGL +EEL++LEK+L+ GL+RV E    K    +S++ +K
Subjt:  MLEILERHNSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK

AT2G22540.2 K-box region and MADS-box transcription factor family protein4.9e-1751.04Show/hide
Query:  MLEILERHNSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK
        M E+LERHN + S+NL  L++PS+ELQL E++  A++++E+  KSH LRQM+GEELQGL +EEL++LEK+L+ GL+RV E    K    +S++ +K
Subjt:  MLEILERHNSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK

AT4G24540.1 AGAMOUS-like 242.0e-1047.5Show/hide
Query:  MLEILERHNSVHSENLPNL-NEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAE
        M +IL R+ S+H+ N+  L + PS  L+LE+   ++L++EVE K+ +LR+++GE+L GL +EEL++LEK L+ GLSRV+E
Subjt:  MLEILERHNSVHSENLPNL-NEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGAGATACTTGAGAGGCATAATAGTGTCCATTCAGAGAACCTTCCCAATTTGAATGAACCATCAGTTGAGTTGCAGCTCGAGAGCAATATTCGAGCGAAGTTGAA
TGAAGAAGTCGAAAAAAAGAGCCATGAACTAAGGCAAATGAAAGGAGAGGAGCTTCAAGGTTTGGGGATGGAAGAACTTAAGAAATTAGAGAAATCTCTTCAAGGAGGAC
TCAGTCGTGTTGCTGAAATTATGGATGGAAAAAATACTGATTTGCTCAGCGATATTGGAAGGAAGATCATAGCTGGGGTCGCATTTGGCCCCATTGAGATTGTCAGTAAC
ACCACCAATGATGTTGATGTTCAACCTGACCTGGGGTCACAATGTACTTCCTTGAAGTATGATAGTGAGATTGTCCTCCACTTAAATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGAGATACTTGAGAGGCATAATAGTGTCCATTCAGAGAACCTTCCCAATTTGAATGAACCATCAGTTGAGTTGCAGCTCGAGAGCAATATTCGAGCGAAGTTGAA
TGAAGAAGTCGAAAAAAAGAGCCATGAACTAAGGCAAATGAAAGGAGAGGAGCTTCAAGGTTTGGGGATGGAAGAACTTAAGAAATTAGAGAAATCTCTTCAAGGAGGAC
TCAGTCGTGTTGCTGAAATTATGGATGGAAAAAATACTGATTTGCTCAGCGATATTGGAAGGAAGATCATAGCTGGGGTCGCATTTGGCCCCATTGAGATTGTCAGTAAC
ACCACCAATGATGTTGATGTTCAACCTGACCTGGGGTCACAATGTACTTCCTTGAAGTATGATAGTGAGATTGTCCTCCACTTAAATTGTTGA
Protein sequenceShow/hide protein sequence
MLEILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKIIAGVAFGPIEIVSN
TTNDVDVQPDLGSQCTSLKYDSEIVLHLNC