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CSPI07G05950 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G05950
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionMADS-box protein JOINTLESS-like isoform X2
Genome locationChr7:4457858..4460187
RNA-Seq ExpressionCSPI07G05950
SyntenyCSPI07G05950
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136891.2 MADS-box protein SVP isoform X1 [Cucumis sativus]1.2e-2588.31Show/hide
Query:  QNVIIVSHQSDKVDLLIEENKRLNQLEVDKLGEQIMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF
        +N  ++S    KVDLLIEENKRLNQLEVDKLGEQIMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF
Subjt:  QNVIIVSHQSDKVDLLIEENKRLNQLEVDKLGEQIMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF

XP_008455140.1 PREDICTED: MADS-box protein SVP-like isoform X1 [Cucumis melo]1.8e-2179.49Show/hide
Query:  QNVIIVSHQSDKVDLLIEENKRLNQLEVDKLGEQ-IMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF
        +N  ++S    KVDLLIEENKRLN+LEV+K+GEQ IMQNIQG+SSES+GNNSTSSNNPSQDYDSSDTSLKLGLPLLD+
Subjt:  QNVIIVSHQSDKVDLLIEENKRLNQLEVDKLGEQ-IMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF

XP_008455141.1 PREDICTED: MADS-box protein JOINTLESS-like isoform X2 [Cucumis melo]6.2e-1482.14Show/hide
Query:  LNQLEVDKLGEQ-IMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF
        + + EV+K+GEQ IMQNIQG+SSES+GNNSTSSNNPSQDYDSSDTSLKLGLPLLD+
Subjt:  LNQLEVDKLGEQ-IMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF

XP_022141962.1 MADS-box protein JOINTLESS-like isoform X2 [Momordica charantia]2.8e-1464.94Show/hide
Query:  QNVIIVSHQSDKVDLLIEENKRLNQLEVDKLGEQIMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF
        +N+ ++     KVD+L+EEN+RLNQLEV+K+ +Q MQN+QG+SSESI NN  SS+NPSQDYDSSDTSLKLGLP L++
Subjt:  QNVIIVSHQSDKVDLLIEENKRLNQLEVDKLGEQIMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF

XP_038886862.1 MADS-box protein SVP-like isoform X1 [Benincasa hispida]1.0e-1674.03Show/hide
Query:  QNVIIVSHQSDKVDLLIEENKRLNQLEVDKLGEQIMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF
        +N  ++S    KVDLLIEENKRLNQLE++ + EQ MQNIQG+SSESI NNSTSS NPSQDYDSSDTSLKLGLPLL++
Subjt:  QNVIIVSHQSDKVDLLIEENKRLNQLEVDKLGEQIMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF

TrEMBL top hitse value%identityAlignment
A0A1S3BZT6 MADS-box protein JOINTLESS-like isoform X23.0e-1482.14Show/hide
Query:  LNQLEVDKLGEQ-IMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF
        + + EV+K+GEQ IMQNIQG+SSES+GNNSTSSNNPSQDYDSSDTSLKLGLPLLD+
Subjt:  LNQLEVDKLGEQ-IMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF

A0A1S3C1G2 MADS-box protein SVP-like isoform X18.7e-2279.49Show/hide
Query:  QNVIIVSHQSDKVDLLIEENKRLNQLEVDKLGEQ-IMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF
        +N  ++S    KVDLLIEENKRLN+LEV+K+GEQ IMQNIQG+SSES+GNNSTSSNNPSQDYDSSDTSLKLGLPLLD+
Subjt:  QNVIIVSHQSDKVDLLIEENKRLNQLEVDKLGEQ-IMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF

A0A6J1CKS2 MADS-box protein JOINTLESS-like isoform X13.3e-1364.1Show/hide
Query:  QNVIIVSHQSDKVDLLIEENKRLNQL-EVDKLGEQIMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF
        +N+ ++     KVD+L+EEN+RLNQL EV+K+ +Q MQN+QG+SSESI NN  SS+NPSQDYDSSDTSLKLGLP L++
Subjt:  QNVIIVSHQSDKVDLLIEENKRLNQL-EVDKLGEQIMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF

A0A6J1CLA0 MADS-box protein JOINTLESS-like isoform X21.3e-1464.94Show/hide
Query:  QNVIIVSHQSDKVDLLIEENKRLNQLEVDKLGEQIMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF
        +N+ ++     KVD+L+EEN+RLNQLEV+K+ +Q MQN+QG+SSESI NN  SS+NPSQDYDSSDTSLKLGLP L++
Subjt:  QNVIIVSHQSDKVDLLIEENKRLNQLEVDKLGEQIMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF

A0A6J1GJY0 MADS-box protein JOINTLESS-like isoform X14.5e-1060.53Show/hide
Query:  QNVIIVSHQSDKVDLLIEENKRLNQLEVDKLGEQIMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLD
        +N  ++     KVDLLIEEN+RLNQLEV+K+  Q   N+QGHSSESI NN       SQDYDSSDTSLKLGL  L+
Subjt:  QNVIIVSHQSDKVDLLIEENKRLNQLEVDKLGEQIMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGGTTTGGGGTTGCACTTAGTCCTAGCCGAGCCAAGCCCATCCCACCCCATCCTGAACCATATGTGTCTACGAGCAGAAGAGGTTCAGAATGTGATCATAGTTTC
ACACCAGTCAGATAAAGTTGATTTGCTGATAGAAGAAAACAAGAGATTGAACCAGCTTGAAGTGGACAAATTGGGAGAGCAAATAATGCAGAACATACAAGGACATTCTT
CTGAGTCTATAGGGAATAATTCAACTTCATCAAATAACCCTTCTCAAGATTATGACAGCTCTGACACTTCTCTCAAACTGGGATTGCCATTGCTTGATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGGTTTGGGGTTGCACTTAGTCCTAGCCGAGCCAAGCCCATCCCACCCCATCCTGAACCATATGTGTCTACGAGCAGAAGAGGTTCAGAATGTGATCATAGTTTC
ACACCAGTCAGATAAAGTTGATTTGCTGATAGAAGAAAACAAGAGATTGAACCAGCTTGAAGTGGACAAATTGGGAGAGCAAATAATGCAGAACATACAAGGACATTCTT
CTGAGTCTATAGGGAATAATTCAACTTCATCAAATAACCCTTCTCAAGATTATGACAGCTCTGACACTTCTCTCAAACTGGGATTGCCATTGCTTGATTTTTGAATTATA
TGGCTGAAGATTGGCATCTGAATCAACCCAAAAGATCAGCTATTTACCATTTGGAAAATAGTTCATTTGGTAAATATATATATCTATATATATATAGAGTCTGAAAAAAA
AAAAGAATGATAAATAAGGTAGGATTAAGTGAGCA
Protein sequenceShow/hide protein sequence
MRGLGLHLVLAEPSPSHPILNHMCLRAEEVQNVIIVSHQSDKVDLLIEENKRLNQLEVDKLGEQIMQNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLDF