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CSPI07G06360 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G06360
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-type domain-containing protein
Genome locationChr7:4683712..4684314
RNA-Seq ExpressionCSPI07G06360
SyntenyCSPI07G06360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044491.1 putative zinc finger protein [Cucumis melo var. makuwa]1.8e-0468.09Show/hide
Query:  EEDEVNSTCRVFEKIYPLEIVMELLVFETTREIDHQPQVMTAPTSDS
        EED+ NS CRVF KIYPLEIV+EL+VFET R ID QPQV   PT ++
Subjt:  EEDEVNSTCRVFEKIYPLEIVMELLVFETTREIDHQPQVMTAPTSDS
KAE8645830.1 hypothetical protein Csa_017091 [Cucumis sativus]1.6e-0558.73Show/hide
Query:  KVEEEEEEEEDEVNSTCRVFEKIYPLEIVMELLVFETTREIDHQPQV-MTAPTSDSDEVLESM
        KVEEEEE++E+  +S  RVF+KIY LEI +ELL+F+  R +D+QPQV M  PTSDS   +ESM
Subjt:  KVEEEEEEEEDEVNSTCRVFEKIYPLEIVMELLVFETTREIDHQPQV-MTAPTSDSDEVLESM
KGN43802.1 hypothetical protein Csa_017284 [Cucumis sativus]8.7e-0739.85Show/hide
Query:  MAEEIIDTCRYGYYMVYGYVTNNYQSPPTASTTKPNSFSTQLANIYQTNGPELFQTSTQMSALPNI-----KVEEEEEEEEDEVNSTCRVFEKIYPLEIV
        MAEEIIDTCRY        VT  +      ST+K    + +   +Y     E++  + ++     I     KVEEEEEE++                   
Subjt:  MAEEIIDTCRYGYYMVYGYVTNNYQSPPTASTTKPNSFSTQLANIYQTNGPELFQTSTQMSALPNI-----KVEEEEEEEEDEVNSTCRVFEKIYPLEIV

Query:  MELLVFETTREIDHQPQVMTAPTSDSDEVLESM
              ETTREIDHQPQVMTAPTSDSD+VLESM
Subjt:  MELLVFETTREIDHQPQVMTAPTSDSDEVLESM
TrEMBL top hitse value%identityAlignment
A0A0A0K2A5 RING-type domain-containing protein8.0e-0658.73Show/hide
Query:  KVEEEEEEEEDEVNSTCRVFEKIYPLEIVMELLVFETTREIDHQPQV-MTAPTSDSDEVLESM
        KVEEEEE++E+  +S  RVF+KIY LEI +ELL+F+  R +D+QPQV M  PTSDS   +ESM
Subjt:  KVEEEEEEEEDEVNSTCRVFEKIYPLEIVMELLVFETTREIDHQPQV-MTAPTSDSDEVLESM
A0A0A0K679 Uncharacterized protein4.2e-0739.85Show/hide
Query:  MAEEIIDTCRYGYYMVYGYVTNNYQSPPTASTTKPNSFSTQLANIYQTNGPELFQTSTQMSALPNI-----KVEEEEEEEEDEVNSTCRVFEKIYPLEIV
        MAEEIIDTCRY        VT  +      ST+K    + +   +Y     E++  + ++     I     KVEEEEEE++                   
Subjt:  MAEEIIDTCRYGYYMVYGYVTNNYQSPPTASTTKPNSFSTQLANIYQTNGPELFQTSTQMSALPNI-----KVEEEEEEEEDEVNSTCRVFEKIYPLEIV

Query:  MELLVFETTREIDHQPQVMTAPTSDSDEVLESM
              ETTREIDHQPQVMTAPTSDSD+VLESM
Subjt:  MELLVFETTREIDHQPQVMTAPTSDSDEVLESM
A0A5D3E1H7 Putative zinc finger protein8.8e-0568.09Show/hide
Query:  EEDEVNSTCRVFEKIYPLEIVMELLVFETTREIDHQPQVMTAPTSDS
        EED+ NS CRVF KIYPLEIV+EL+VFET R ID QPQV   PT ++
Subjt:  EEDEVNSTCRVFEKIYPLEIVMELLVFETTREIDHQPQVMTAPTSDS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAAGAAATCATTGATACTTGTAGGTATGGTTACTACATGGTTTATGGGTATGTCACTAACAATTACCAATCCCCACCTACAGCGTCAACCACGAAACCAAATTC
GTTTTCGACGCAACTCGCCAACATATATCAGACGAATGGACCTGAATTATTTCAAACTTCAACTCAGATGTCAGCACTTCCAAACATAAAAGTTGAAGAAGAAGAAGAAG
AAGAAGAAGATGAAGTGAATAGTACTTGTAGGGTGTTTGAAAAGATTTATCCTCTTGAAATTGTGATGGAGTTGTTGGTTTTTGAGACAACTCGTGAGATAGATCATCAA
CCACAAGTAATGACAGCTCCAACAAGCGACAGTGACGAAGTACTGGAGAGTATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAAGAAATCATTGATACTTGTAGGTATGGTTACTACATGGTTTATGGGTATGTCACTAACAATTACCAATCCCCACCTACAGCGTCAACCACGAAACCAAATTC
GTTTTCGACGCAACTCGCCAACATATATCAGACGAATGGACCTGAATTATTTCAAACTTCAACTCAGATGTCAGCACTTCCAAACATAAAAGTTGAAGAAGAAGAAGAAG
AAGAAGAAGATGAAGTGAATAGTACTTGTAGGGTGTTTGAAAAGATTTATCCTCTTGAAATTGTGATGGAGTTGTTGGTTTTTGAGACAACTCGTGAGATAGATCATCAA
CCACAAGTAATGACAGCTCCAACAAGCGACAGTGACGAAGTACTGGAGAGTATGTAA
Protein sequenceShow/hide protein sequence
MAEEIIDTCRYGYYMVYGYVTNNYQSPPTASTTKPNSFSTQLANIYQTNGPELFQTSTQMSALPNIKVEEEEEEEEDEVNSTCRVFEKIYPLEIVMELLVFETTREIDHQ
PQVMTAPTSDSDEVLESM