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CSPI07G06370 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G06370
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUPF0481 protein At3g47200-like
Genome locationChr7:4686313..4687062
RNA-Seq ExpressionCSPI07G06370
SyntenyCSPI07G06370
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064945.1 UPF0481 protein [Cucumis melo var. makuwa]2.5e-1757.28Show/hide
Query:  VTAGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVST
        V +G+I+N+I  S+KEVSELFNNL KFV      + Y   FN+ISKAL ++   R W K K  SLK NYFNTPWA I+ FAG+F+++LTLLQTIFS +S 
Subjt:  VTAGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVST

Query:  FLS
        F S
Subjt:  FLS

KAE8645829.1 hypothetical protein Csa_017093 [Cucumis sativus]4.1e-2891.89Show/hide
Query:  AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEK-FNYISKALCENNRDRYWKKLKGRSLKQNYFNTPWA
        AGIIVNDID S+KEVSELFNNLSKFVRRSSDISAYFEK FNYISKALCENNR+R WKKLKGRSLK NYFNTPWA
Subjt:  AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEK-FNYISKALCENNRDRYWKKLKGRSLKQNYFNTPWA

XP_011649818.1 UPF0481 protein At3g47200 [Cucumis sativus]6.4e-3745.49Show/hide
Query:  VHAESKEKQRTLSIFKRTYSPEYCTKEKNNLLSRTDSCFYRKKKKHEQNDREEKIWIPPSMTELFEAGVT------------------------------
        VHAE+++ Q+TLSIFK+TY      K KNNL     SCF R+ KKH +ND E+K++IPPS+TEL EAGVT                              
Subjt:  VHAESKEKQRTLSIFKRTYSPEYCTKEKNNLLSRTDSCFYRKKKKHEQNDREEKIWIPPSMTELFEAGVT------------------------------

Query:  ---------------------------------------------AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYW
                                                     AGIIVNDI  S+KEVS+LFNNLSKFV RS + S YF+KF  ISKALCE +RDR W
Subjt:  ---------------------------------------------AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYW

Query:  KKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF
         KLK  SLK NYFNTPWA I++FA T +I+LTLLQTIF+ +STF
Subjt:  KKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF

XP_016899969.1 PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo]4.9e-5354.4Show/hide
Query:  VHAESKEKQRTLSIFKRTYSPEYCTKEKNNLLSRTDSCFYRKKKKHEQND-----REEKIWIPPSMTELFEAGVT-------------------------
        VHAE+ EKQRTLSIFKRTYSPEY TK KNNLLSRT SCF R KKKH +ND      EEK+WIPPS+TEL EAGVT                         
Subjt:  VHAESKEKQRTLSIFKRTYSPEYCTKEKNNLLSRTDSCFYRKKKKHEQND-----REEKIWIPPSMTELFEAGVT-------------------------

Query:  ---------------------------------------------------AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCEN
                                                           AGIIVNDI  S+KEVSELFNNLSKFV RS DISAYFEKFN ISKALCE 
Subjt:  ---------------------------------------------------AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCEN

Query:  NRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF
        +RDR W KLK  SLK NYFNTPWAGI++FA TFII+LTLLQTIF+ +STF
Subjt:  NRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF

XP_022961902.1 UPF0481 protein At3g47200-like [Cucurbita moschata]2.5e-1759.41Show/hide
Query:  VTAGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVST
        V A II+NDI  SNKEVS+LFNNL KFV    D     +KFN ISKAL ++   R W K K  SLK NYFNTPWA I+  A   +IILTLLQT+FSA+S 
Subjt:  VTAGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVST

Query:  F
        F
Subjt:  F

TrEMBL top hitse value%identityAlignment
A0A0A0K2S5 Uncharacterized protein4.9e-7571.56Show/hide
Query:  MVHAESKEKQRTLSIFKRTYSPEYCTKEKNNLLSRTDSCFYRKKKKHEQNDREEKIWIPPSMTELFEAGVT-----------------------------
        MVHAESKEKQRTLSIFKRTYSPEYCTKEKNNLLSRTDSCFYRKKKKHEQND EEKIWIPPS+TELFEAGVT                             
Subjt:  MVHAESKEKQRTLSIFKRTYSPEYCTKEKNNLLSRTDSCFYRKKKKHEQNDREEKIWIPPSMTELFEAGVT-----------------------------

Query:  -----------------------AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEK-FNYISKALCENNRDRYWKKLKGRSLKQNYFNTPWAGIT
                               AGIIVNDID S+KEVSELFNNLSKFVRRSSDISAYFEK FNYISKALCENNR+R WKKLKGRSLK NYFNTPWAGI 
Subjt:  -----------------------AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEK-FNYISKALCENNRDRYWKKLKGRSLKQNYFNTPWAGIT

Query:  IFAGTFIIILTLLQTIFSAVSTFLS
        IF GTFIIILTLLQTIFS +STFLS
Subjt:  IFAGTFIIILTLLQTIFSAVSTFLS

A0A0A0LQ64 Uncharacterized protein3.1e-3745.49Show/hide
Query:  VHAESKEKQRTLSIFKRTYSPEYCTKEKNNLLSRTDSCFYRKKKKHEQNDREEKIWIPPSMTELFEAGVT------------------------------
        VHAE+++ Q+TLSIFK+TY      K KNNL     SCF R+ KKH +ND E+K++IPPS+TEL EAGVT                              
Subjt:  VHAESKEKQRTLSIFKRTYSPEYCTKEKNNLLSRTDSCFYRKKKKHEQNDREEKIWIPPSMTELFEAGVT------------------------------

Query:  ---------------------------------------------AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYW
                                                     AGIIVNDI  S+KEVS+LFNNLSKFV RS + S YF+KF  ISKALCE +RDR W
Subjt:  ---------------------------------------------AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYW

Query:  KKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF
         KLK  SLK NYFNTPWA I++FA T +I+LTLLQTIF+ +STF
Subjt:  KKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF

A0A1S4DVF8 UPF0481 protein At3g47200-like2.4e-5354.4Show/hide
Query:  VHAESKEKQRTLSIFKRTYSPEYCTKEKNNLLSRTDSCFYRKKKKHEQND-----REEKIWIPPSMTELFEAGVT-------------------------
        VHAE+ EKQRTLSIFKRTYSPEY TK KNNLLSRT SCF R KKKH +ND      EEK+WIPPS+TEL EAGVT                         
Subjt:  VHAESKEKQRTLSIFKRTYSPEYCTKEKNNLLSRTDSCFYRKKKKHEQND-----REEKIWIPPSMTELFEAGVT-------------------------

Query:  ---------------------------------------------------AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCEN
                                                           AGIIVNDI  S+KEVSELFNNLSKFV RS DISAYFEKFN ISKALCE 
Subjt:  ---------------------------------------------------AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCEN

Query:  NRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF
        +RDR W KLK  SLK NYFNTPWAGI++FA TFII+LTLLQTIF+ +STF
Subjt:  NRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF

A0A5A7VCD8 UPF0481 protein2.4e-5354.4Show/hide
Query:  VHAESKEKQRTLSIFKRTYSPEYCTKEKNNLLSRTDSCFYRKKKKHEQND-----REEKIWIPPSMTELFEAGVT-------------------------
        VHAE+ EKQRTLSIFKRTYSPEY TK KNNLLSRT SCF R KKKH +ND      EEK+WIPPS+TEL EAGVT                         
Subjt:  VHAESKEKQRTLSIFKRTYSPEYCTKEKNNLLSRTDSCFYRKKKKHEQND-----REEKIWIPPSMTELFEAGVT-------------------------

Query:  ---------------------------------------------------AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCEN
                                                           AGIIVNDI  S+KEVSELFNNLSKFV RS DISAYFEKFN ISKALCE 
Subjt:  ---------------------------------------------------AGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCEN

Query:  NRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF
        +RDR W KLK  SLK NYFNTPWAGI++FA TFII+LTLLQTIF+ +STF
Subjt:  NRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF

A0A6J1HBC7 UPF0481 protein At3g47200-like1.2e-1759.41Show/hide
Query:  VTAGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVST
        V A II+NDI  SNKEVS+LFNNL KFV    D     +KFN ISKAL ++   R W K K  SLK NYFNTPWA I+  A   +IILTLLQT+FSA+S 
Subjt:  VTAGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVST

Query:  F
        F
Subjt:  F

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G50130.1 Plant protein of unknown function (DUF247)1.8e-0536.36Show/hide
Query:  EVSELFNNLSKFVRRSSDISAYFEKFNYISKA--LCENNRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF
        EV++LFN L + V       A+  + +Y+S+     + N  R W  LK   LK  YFN PWA  + FA   +++LTL Q+ F+A   F
Subjt:  EVSELFNNLSKFVRRSSDISAYFEKFNYISKA--LCENNRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF

AT3G50140.1 Plant protein of unknown function (DUF247)2.0e-0433.33Show/hide
Query:  SNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRY----WKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF
        ++ EV+++FN L + V       A+  +  Y+S+    N  DRY    W  LK  +LK  YF+ PWA  + FA   +++LTL Q+ F++   F
Subjt:  SNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRY----WKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF

AT3G50150.1 Plant protein of unknown function (DUF247)1.4e-0535.16Show/hide
Query:  SNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNR--DRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF
        S+ EV++LFN L K V        +  K  Y+S+   E NR   R W  LK  +L+Q YFN PWA  +  A   ++ LT  Q+ F+  + +
Subjt:  SNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNR--DRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTF

AT3G50180.1 Plant protein of unknown function (DUF247)7.6e-0433.01Show/hide
Query:  GIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNR---DRYWKKLKG--RSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAV
        GII + +  SN EV+++FN L + V        +  K  Y+S+ L E +R     Y +KL     +L   Y + PWA ++ FA   ++ILT  Q+ F+A 
Subjt:  GIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNR---DRYWKKLKG--RSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAV

Query:  STF
        + F
Subjt:  STF

AT4G31980.1 unknown protein2.1e-0634.34Show/hide
Query:  VTAGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVS
        + +GIIVN + +S  +VS LFN++SK V    D   YF   +   +A C    +R WK +    L+++YF+ PWA  ++FA   +++LT +Q++ S ++
Subjt:  VTAGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKFNYISKALCENNRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCATGCGGAAAGCAAAGAAAAACAAAGAACTCTTTCAATCTTCAAACGAACCTACTCGCCGGAATATTGTACAAAGGAGAAGAATAATTTGTTGAGCAGAACAGA
CTCATGTTTTTATCGGAAGAAGAAGAAGCATGAGCAAAATGACCGTGAGGAAAAGATATGGATTCCTCCATCCATGACGGAGCTCTTTGAGGCTGGTGTCACCGCAGGAA
TCATAGTCAACGATATCGATGACAGCAATAAAGAAGTTTCAGAATTGTTTAACAATCTCAGTAAATTTGTGCGTAGGTCAAGTGATATTAGTGCGTATTTTGAGAAATTC
AACTATATCAGCAAAGCTTTGTGTGAGAATAATCGTGACAGATATTGGAAAAAGTTGAAAGGTCGTTCTTTGAAACAAAACTATTTCAATACGCCATGGGCTGGTATCAC
TATCTTTGCTGGAACCTTCATTATTATTCTCACTCTCCTTCAAACCATATTCTCTGCTGTATCTACATTTCTTAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCATGCGGAAAGCAAAGAAAAACAAAGAACTCTTTCAATCTTCAAACGAACCTACTCGCCGGAATATTGTACAAAGGAGAAGAATAATTTGTTGAGCAGAACAGA
CTCATGTTTTTATCGGAAGAAGAAGAAGCATGAGCAAAATGACCGTGAGGAAAAGATATGGATTCCTCCATCCATGACGGAGCTCTTTGAGGCTGGTGTCACCGCAGGAA
TCATAGTCAACGATATCGATGACAGCAATAAAGAAGTTTCAGAATTGTTTAACAATCTCAGTAAATTTGTGCGTAGGTCAAGTGATATTAGTGCGTATTTTGAGAAATTC
AACTATATCAGCAAAGCTTTGTGTGAGAATAATCGTGACAGATATTGGAAAAAGTTGAAAGGTCGTTCTTTGAAACAAAACTATTTCAATACGCCATGGGCTGGTATCAC
TATCTTTGCTGGAACCTTCATTATTATTCTCACTCTCCTTCAAACCATATTCTCTGCTGTATCTACATTTCTTAGCTAA
Protein sequenceShow/hide protein sequence
MVHAESKEKQRTLSIFKRTYSPEYCTKEKNNLLSRTDSCFYRKKKKHEQNDREEKIWIPPSMTELFEAGVTAGIIVNDIDDSNKEVSELFNNLSKFVRRSSDISAYFEKF
NYISKALCENNRDRYWKKLKGRSLKQNYFNTPWAGITIFAGTFIIILTLLQTIFSAVSTFLS