; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G07030 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G07030
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionclassical arabinogalactan protein 9
Genome locationChr7:5117826..5119914
RNA-Seq ExpressionCSPI07G07030
SyntenyCSPI07G07030
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR044981 - Lysine-rich arabinogalactan protein AGP9/17/18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645846.1 hypothetical protein Csa_017309 [Cucumis sativus]1.0e-75100Show/hide
Query:  MMDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPP
        MMDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPP
Subjt:  MMDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPP

Query:  ASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLML
        ASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLML
Subjt:  ASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLML

KAG6571935.1 hypothetical protein SDJN03_28663, partial [Cucurbita argyrosperma subsp. sororia]5.2e-5174.65Show/hide
Query:  MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTT------STPPPVSSPPPA--------------ATPPPASPPPASPPPASPPPATPPPASPPPA
        MDP+AL C TLISIAF +A AQ PSSPPTATP+PPTT      +TPPPVS+PPPA              ATPPPASPPPA+PPPASPPPATPPPASPPPA
Subjt:  MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTT------STPPPVSSPPPA--------------ATPPPASPPPASPPPASPPPATPPPASPPPA

Query:  SPPPASPPPASPPPATPPPASP----PPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRK
        +PPPASPPPA+PPPA+PPPA+P    PPPATPPPAPLASPP AVPAPAPSKKK+K AAP P+PVSSPP PS E PGPAGP +SPTPSQNDNSGVEK WRK
Subjt:  SPPPASPPPASPPPATPPPASP----PPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRK

Query:  ESMVGSIVIGMGYVFLM
        E+MVGS++IGMGYV +M
Subjt:  ESMVGSIVIGMGYVFLM

XP_004136948.3 classical arabinogalactan protein 9 [Cucumis sativus]1.0e-75100Show/hide
Query:  MMDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPP
        MMDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPP
Subjt:  MMDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPP

Query:  ASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLML
        ASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLML
Subjt:  ASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLML

XP_008455018.1 PREDICTED: classical arabinogalactan protein 9 [Cucumis melo]2.4e-6489.42Show/hide
Query:  MMDPRA-LLCFTLISIAFPLARAQSPSSPPTATPSPPTT------STPPPVSS------PPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPAS
        MMDPRA LLCFT ISIAF +A AQSPSSPPTATPSPPTT      STPPPVSS      PPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPAS
Subjt:  MMDPRA-LLCFTLISIAFPLARAQSPSSPPTATPSPPTT------STPPPVSS------PPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPAS

Query:  PPPASPPPATPPPASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIG
        PPPASPPPA+PPPAS PPPA PPPAPLASPPTAVPAPAPSKKKVKAAAP P+PVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIG
Subjt:  PPPASPPPATPPPASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIG

Query:  MGYVFLML
        MGYVFLML
Subjt:  MGYVFLML

XP_023553858.1 classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo]3.9e-5177.78Show/hide
Query:  MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTT------STPPPVSSPPPA----ATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPA
        MDP+AL CFTLISIAF +A AQ PSSPPTAT +PPTT      +TPPPVSSPPPA    A+PPPA+PPPASPPPA+PPPA+PPPA+PPPASPPPA+PPPA
Subjt:  MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTT------STPPPVSSPPPA----ATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPA

Query:  SPPPATPPPASP----PPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIG
        SPPPATPPPASP    PPPATPPP PLASPP AVPAPAPSKKK+K AAP P+PVSSPP PS E PGPAGP +SPTPSQNDNSGVEK WRKE+MVGS++IG
Subjt:  SPPPATPPPASP----PPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIG

Query:  MGYVFLM
        MGYV +M
Subjt:  MGYVFLM

TrEMBL top hitse value%identityAlignment
A0A0A0K6D8 Uncharacterized protein1.5e-75100Show/hide
Query:  MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPA
        MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPA
Subjt:  MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPA

Query:  SPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLML
        SPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLML
Subjt:  SPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLML

A0A1S3BZW9 classical arabinogalactan protein 91.2e-6489.42Show/hide
Query:  MMDPRA-LLCFTLISIAFPLARAQSPSSPPTATPSPPTT------STPPPVSS------PPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPAS
        MMDPRA LLCFT ISIAF +A AQSPSSPPTATPSPPTT      STPPPVSS      PPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPAS
Subjt:  MMDPRA-LLCFTLISIAFPLARAQSPSSPPTATPSPPTT------STPPPVSS------PPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPAS

Query:  PPPASPPPATPPPASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIG
        PPPASPPPA+PPPAS PPPA PPPAPLASPPTAVPAPAPSKKKVKAAAP P+PVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIG
Subjt:  PPPASPPPATPPPASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIG

Query:  MGYVFLML
        MGYVFLML
Subjt:  MGYVFLML

A0A5A7SJX5 Classical arabinogalactan protein 91.2e-6489.42Show/hide
Query:  MMDPRA-LLCFTLISIAFPLARAQSPSSPPTATPSPPTT------STPPPVSS------PPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPAS
        MMDPRA LLCFT ISIAF +A AQSPSSPPTATPSPPTT      STPPPVSS      PPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPAS
Subjt:  MMDPRA-LLCFTLISIAFPLARAQSPSSPPTATPSPPTT------STPPPVSS------PPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPAS

Query:  PPPASPPPATPPPASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIG
        PPPASPPPA+PPPAS PPPA PPPAPLASPPTAVPAPAPSKKKVKAAAP P+PVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIG
Subjt:  PPPASPPPATPPPASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIG

Query:  MGYVFLML
        MGYVFLML
Subjt:  MGYVFLML

A0A6J1GK65 classical arabinogalactan protein 9-like2.1e-5076.67Show/hide
Query:  MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTT-----STPPPVSSPPPA---ATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASP
        MDP+AL CFTLI +AF +A AQ PSSPPTA   P TT     +TPPPVS+PPPA   ATPPPASPPPA+PPPASPPPATPPPASPPPASPPPA+PPPASP
Subjt:  MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTT-----STPPPVSSPPPA---ATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASP

Query:  PPATPPPASP---------PPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSI
        PPATPPPASP         PPPATPPPAPLASPP AVPAPAPSKKK+K AAP P+PVSSPP PS E PGPAGP +SPTPSQNDNSGVEK WRKE+MVGS+
Subjt:  PPATPPPASP---------PPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSI

Query:  VIGMGYVFLM
        +IGMGYV +M
Subjt:  VIGMGYVFLM

A0A6J1I8J9 classical arabinogalactan protein 9-like1.4e-3862.61Show/hide
Query:  MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPP-------------------------------------TTSTPPPVSSPPPAATPPPASPPPASPP
        MDP+AL CFTLISIAF +A AQ PSSPPTATP+PP                                                   ATPPPASPPPA+PP
Subjt:  MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPP-------------------------------------TTSTPPPVSSPPPAATPPPASPPPASPP

Query:  PASPPPATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPS
        PASPPPATPPPASPPPA+PPPASPPPA+PPPAT      PPPATPPPAPLASPP AVPAPAPSKKK+K AAP  +PVSSPP PS E PGPAGP +SPTPS
Subjt:  PASPPPATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPS

Query:  QNDNSGVEKVWRKESMVGSIVIGMGYVFLM
        QNDNSGVEK WRKE+++GS++IGMGYV +M
Subjt:  QNDNSGVEKVWRKESMVGSIVIGMGYVFLM

SwissProt top hitse value%identityAlignment
Q9C5S0 Classical arabinogalactan protein 93.5e-1855.28Show/hide
Query:  ALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPP--ASPPP--ASPPPASPPP--ATPPPASPPPASPPPASPPPASPPPATPP
        A++C  LI+        Q+P+SPPTATP+PPT +TPPP ++PPP + PPP   SPPP   +PPPA+PPP  ++PPPASPPPA+PPP + PP  PP A+PP
Subjt:  ALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPP--ASPPP--ASPPPASPPP--ATPPPASPPPASPPPASPPPASPPPATPP

Query:  PASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQ---NDNSGVEKVWRKESMVGSIVIGMGYVFLML
        PA+PPP ATPPPAPLASPP  VPAPAP+    K  +PSPSP SSPP PS +APGP+    SP PS    ND +G  K      MV S+V G   V+ M+
Subjt:  PASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQ---NDNSGVEKVWRKESMVGSIVIGMGYVFLML

Arabidopsis top hitse value%identityAlignment
AT2G14890.1 arabinogalactan protein 92.5e-1955.28Show/hide
Query:  ALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPP--ASPPP--ASPPPASPPP--ATPPPASPPPASPPPASPPPASPPPATPP
        A++C  LI+        Q+P+SPPTATP+PPT +TPPP ++PPP + PPP   SPPP   +PPPA+PPP  ++PPPASPPPA+PPP + PP  PP A+PP
Subjt:  ALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPP--ASPPP--ASPPPASPPP--ATPPPASPPPASPPPASPPPASPPPATPP

Query:  PASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQ---NDNSGVEKVWRKESMVGSIVIGMGYVFLML
        PA+PPP ATPPPAPLASPP  VPAPAP+    K  +PSPSP SSPP PS +APGP+    SP PS    ND +G  K      MV S+V G   V+ M+
Subjt:  PASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQ---NDNSGVEKVWRKESMVGSIVIGMGYVFLML

AT2G14890.2 arabinogalactan protein 91.8e-1759.52Show/hide
Query:  ALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPP--ASPPP--ASPPPASPPP--ATPPPASPPPASPPPASPPPASPPPATPP
        A++C  LI+        Q+P+SPPTATP+PPT +TPPP ++PPP + PPP   SPPP   +PPPA+PPP  ++PPPASPPPA+PPP + PP  PP A+PP
Subjt:  ALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPP--ASPPP--ASPPPASPPP--ATPPPASPPPASPPPASPPPASPPPATPP

Query:  PASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQND
        PA+PPP ATPPPAPLASPP  VPAPAP+    K  +PSPSP SSPP PS +APGP+    SP PS  D
Subjt:  PASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGATCCTCGAGCTTTGTTGTGTTTCACTCTCATTTCCATTGCCTTCCCCCTCGCCCGAGCTCAGTCTCCCTCCAGTCCTCCCACTGCCACCCCTTCTCCTCCCAC
CACCTCCACCCCTCCTCCTGTTTCATCTCCCCCTCCAGCTGCTACTCCTCCTCCGGCATCCCCACCACCGGCCTCTCCACCTCCCGCATCCCCACCACCAGCGACTCCAC
CTCCAGCTTCCCCACCACCGGCATCTCCTCCTCCGGCTTCCCCACCACCCGCATCTCCTCCTCCGGCAACTCCACCACCAGCATCTCCTCCTCCTCCCGCGACTCCACCA
CCTGCACCATTGGCATCACCGCCGACGGCAGTTCCAGCTCCTGCACCAAGTAAGAAGAAGGTGAAGGCAGCAGCTCCGAGTCCGTCTCCTGTTTCGAGCCCGCCAGCGCC
GTCAGTAGAGGCTCCAGGACCTGCAGGCCCTGATCAATCTCCTACCCCATCTCAGAACGACAATAGTGGAGTGGAGAAAGTTTGGAGAAAGGAGAGTATGGTGGGGAGCA
TAGTGATTGGAATGGGATATGTATTTTTGATGCTTTAG
mRNA sequenceShow/hide mRNA sequence
TGCAATTTTTATAAAGAAAAATGTATGTAAATTACCTAAATGCTCTCTATCCTCTCTATTTATTCTCTCCCCTCTTTTGATTTCCCTCTCAAACGCTCATCATCGCCATC
GTCCAACAAGAAGAAGAAGAAGAAGAAGAAAAATGATGGATCCTCGAGCTTTGTTGTGTTTCACTCTCATTTCCATTGCCTTCCCCCTCGCCCGAGCTCAGTCTCCCTCC
AGTCCTCCCACTGCCACCCCTTCTCCTCCCACCACCTCCACCCCTCCTCCTGTTTCATCTCCCCCTCCAGCTGCTACTCCTCCTCCGGCATCCCCACCACCGGCCTCTCC
ACCTCCCGCATCCCCACCACCAGCGACTCCACCTCCAGCTTCCCCACCACCGGCATCTCCTCCTCCGGCTTCCCCACCACCCGCATCTCCTCCTCCGGCAACTCCACCAC
CAGCATCTCCTCCTCCTCCCGCGACTCCACCACCTGCACCATTGGCATCACCGCCGACGGCAGTTCCAGCTCCTGCACCAAGTAAGAAGAAGGTGAAGGCAGCAGCTCCG
AGTCCGTCTCCTGTTTCGAGCCCGCCAGCGCCGTCAGTAGAGGCTCCAGGACCTGCAGGCCCTGATCAATCTCCTACCCCATCTCAGAACGACAATAGTGGAGTGGAGAA
AGTTTGGAGAAAGGAGAGTATGGTGGGGAGCATAGTGATTGGAATGGGATATGTATTTTTGATGCTTTAGGGAGAAGAAAAGGGTTTCTTTTTGCTGTCTATGTGTTGCC
TCTTCTTTTCTTTTCTTTTTTCTTTCATTATTTCTTCTTCTTTGGATGGCTCTATATTTCATTTCATTTTGATTATTATTATTAATTAGCCCATGTCTTGTTTGGGACTT
TTGATTTATTATTATTAGCCTTTTGGATCAGTACTACTCTCTCTTTATATATATATATATAATGACCCATTTTGCTTGGGATTCTTTTGAGGCAAAAATATCTTTGTATC
TACACCCTATTTAGAGGGAACTTCTCTTATATATGTTCTCATTC
Protein sequenceShow/hide protein sequence
MMDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPP
PAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLML