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CSPI07G07040 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G07040
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGibberellin regulated protein
Genome locationChr7:5122394..5123712
RNA-Seq ExpressionCSPI07G07040
SyntenyCSPI07G07040
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8008067.1 hypothetical protein FH972_004614 [Carpinus fangiana]4.2e-1656.98Show/hide
Query:  LLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YGKRH-CPCYSHVHTIRGRAKCP
        LL   L  C LLLS+SF++  MA S  CT  C  RCSKA +K RCMKYC ICC +CKCVP G YG +H CPCY      +G+AKCP
Subjt:  LLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YGKRH-CPCYSHVHTIRGRAKCP

KAG6588701.1 Snakin-1, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2885.07Show/hide
Query:  MDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGGYGKRHCPCYSHVHTIRGRAKCP
        M+TAMA +D CTRPCRKRCS AKLKR+CMK+CRICC KCKCVPG YGKRHCPCYSHVHT+RGRAKCP
Subjt:  MDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGGYGKRHCPCYSHVHTIRGRAKCP

KAG7022485.1 Snakin-1 [Cucurbita argyrosperma subsp. argyrosperma]1.8e-3580.68Show/hide
Query:  MRTHLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGGYGKRHCPCYSHVHTIRGRAKCP
        MR  +L++G F CFLLLSASFM+TAMA +D CTRPCRKRCS AKLKR+CMK+CRICC KCKCVPG YGKRHCPCYSHVHT+RGRAKCP
Subjt:  MRTHLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGGYGKRHCPCYSHVHTIRGRAKCP

XP_016499410.1 PREDICTED: peamaclein-like [Nicotiana tabacum]5.4e-1656.58Show/hide
Query:  LLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GGYGKRH-CPCYSHVHTIRGRAKCP
        LLL++SF++TA A S  C R C+ RCSKA +K RC+KYC +CC+KCKCVP G YG +H CPCY  +   +G+ KCP
Subjt:  LLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GGYGKRH-CPCYSHVHTIRGRAKCP

XP_031379474.1 peamaclein-like [Punica granatum]7.1e-1651.76Show/hide
Query:  LLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YGKRH-CPCYSHVHTIRGRAKCP
        LL  +  C  LLS++FM+  MA S  CT+ C +RC KA +K RC+KYC ICC++CKCVP G YG +H CPCY      +G+ KCP
Subjt:  LLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YGKRH-CPCYSHVHTIRGRAKCP

TrEMBL top hitse value%identityAlignment
A0A0A0K2Z1 Uncharacterized protein4.6e-45100Show/hide
Query:  MRTHLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGGYGKRHCPCYSHVHTIRGRAKCP
        MRTHLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGGYGKRHCPCYSHVHTIRGRAKCP
Subjt:  MRTHLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGGYGKRHCPCYSHVHTIRGRAKCP

A0A1S4CE27 peamaclein-like2.6e-1656.58Show/hide
Query:  LLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GGYGKRH-CPCYSHVHTIRGRAKCP
        LLL++SF++TA A S  C R C+ RCSKA +K RC+KYC +CC+KCKCVP G YG +H CPCY  +   +G+ KCP
Subjt:  LLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GGYGKRH-CPCYSHVHTIRGRAKCP

A0A2I0KSA4 peamaclein-like3.4e-1651.76Show/hide
Query:  LLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YGKRH-CPCYSHVHTIRGRAKCP
        LL  +  C  LLS++FM+  MA S  CT+ C +RC KA +K RC+KYC ICC++CKCVP G YG +H CPCY      +G+ KCP
Subjt:  LLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YGKRH-CPCYSHVHTIRGRAKCP

A0A5D3E0A6 Peamaclein-like1.0e-1552.33Show/hide
Query:  LLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YGKRH-CPCYSHVHTIRGRAKCP
        L       CFLL ++SF+DT  A    C + C+KRCS+A +K RCMKYC ICC  CKCVP G YG +H CPCY  + + +GR KCP
Subjt:  LLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YGKRH-CPCYSHVHTIRGRAKCP

A0A5N6QLL9 Uncharacterized protein2.0e-1656.98Show/hide
Query:  LLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YGKRH-CPCYSHVHTIRGRAKCP
        LL   L  C LLLS+SF++  MA S  CT  C  RCSKA +K RCMKYC ICC +CKCVP G YG +H CPCY      +G+AKCP
Subjt:  LLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YGKRH-CPCYSHVHTIRGRAKCP

SwissProt top hitse value%identityAlignment
C0HLQ1 Cypmaclein3.2e-1152.54Show/hide
Query:  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGGYGKR-HCPCYSHVHTIRGRAKCP
        C + C +RCSKA    RC+KYC ICC KC CV PG YG    CPCY+++   +G  KCP
Subjt:  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGGYGKR-HCPCYSHVHTIRGRAKCP

O80641 Gibberellin-regulated protein 83.8e-1246.51Show/hide
Query:  LLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YG-KRHCPCYSHVHTIRGRAKCP
        L+++  F   LLL++SF   + ADS  C   C  RCSKA     C+KYC ICC KC CVP G +G K  CPCY  +   +G +KCP
Subjt:  LLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YG-KRHCPCYSHVHTIRGRAKCP

P86888 Peamaclein4.2e-1153.23Show/hide
Query:  SDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YG-KRHCPCYSHVHTIRGRAKCP
        S  C   C  RCSKA  + RC+KYC ICC KC CVP G YG K  CPCY  +   +G  KCP
Subjt:  SDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YG-KRHCPCYSHVHTIRGRAKCP

Q8LFM2 Gibberellin-regulated protein 102.2e-1249.35Show/hide
Query:  LLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCK-CVPGG-YG-KRHCPCYSHVHTIRGRAKCP
        LL+++S    + ADS  C   C  RCSKA  + RC+KYC ICC KC  CVP G YG K  CPCY  +   +G +KCP
Subjt:  LLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCK-CVPGG-YG-KRHCPCYSHVHTIRGRAKCP

Q948Z4 Snakin-19.6e-1650Show/hide
Query:  LLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YGKRH-CPCYSHVHTIRGRAKCP
        L LL L    L+++ S + T MA S  C   C+ RCSKA L  RC+KYC ICC +CKCVP G YG +H CPCY      +G++KCP
Subjt:  LLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YGKRH-CPCYSHVHTIRGRAKCP

Arabidopsis top hitse value%identityAlignment
AT1G74670.1 Gibberellin-regulated family protein6.2e-1039.58Show/hide
Query:  THLLLLGLFFCFLLLSAS--------FMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGGYG-KRHCPCYSHVHTIRGRAKCP
        T  LLL + F F+ L+ S                S +C   C +RCS  K  + CM +C+ CC+KC CV PG YG K+ CPCY++  T +G  KCP
Subjt:  THLLLLGLFFCFLLLSAS--------FMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGGYG-KRHCPCYSHVHTIRGRAKCP

AT2G14900.1 Gibberellin-regulated family protein7.3e-1149.15Show/hide
Query:  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YGKRH-CPCYSHVHTIRGRAKCP
        C + C  RC +A +K RC+KYC ICC  C+CVP G YG +H C CY    + +G  KCP
Subjt:  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YGKRH-CPCYSHVHTIRGRAKCP

AT2G39540.1 Gibberellin-regulated family protein2.7e-1346.51Show/hide
Query:  LLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YG-KRHCPCYSHVHTIRGRAKCP
        L+++  F   LLL++SF   + ADS  C   C  RCSKA     C+KYC ICC KC CVP G +G K  CPCY  +   +G +KCP
Subjt:  LLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGG-YG-KRHCPCYSHVHTIRGRAKCP

AT4G09610.1 GAST1 protein homolog 21.1e-0947.46Show/hide
Query:  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGGYGKRH-CPCYSHVHTIRGRAKCP
        C   C+ RCSK+   + C++ C  CCS+C CV PG  G  H CPCY+ + T  GR KCP
Subjt:  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGGYGKRH-CPCYSHVHTIRGRAKCP

AT5G59845.1 Gibberellin-regulated family protein1.6e-1349.35Show/hide
Query:  LLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCK-CVPGG-YG-KRHCPCYSHVHTIRGRAKCP
        LL+++S    + ADS  C   C  RCSKA  + RC+KYC ICC KC  CVP G YG K  CPCY  +   +G +KCP
Subjt:  LLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCK-CVPGG-YG-KRHCPCYSHVHTIRGRAKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACTCACCTTTTACTTCTTGGTTTGTTCTTCTGTTTCCTTCTCTTAAGTGCTTCTTTCATGGACACTGCCATGGCTGATTCAGACCGGTGCACAAGACCGTGTAG
GAAGAGGTGCTCGAAAGCGAAGCTGAAGCGTCGGTGCATGAAGTATTGTAGAATATGTTGCAGTAAATGTAAATGTGTGCCAGGGGGCTATGGGAAGCGCCATTGCCCTT
GCTATAGCCATGTCCACACCATTAGAGGCAGGGCCAAGTGCCCTTAA
mRNA sequenceShow/hide mRNA sequence
CAGAAACAAAAATTAAGATGATTGTTGATGAGTATATATAATTGTAGTTGATATGACATTTTATGTTAGAGGTGAGAGATACCACATCTTAACAGTTGTACGGAAGAACA
ATTAATTTTTTTGAAGATCATATTTATAATTTAACCAAGGAGAGAAAGAGATATACTCACTCTGTTTGGTGTTTTAAAAGCGCTTATTAATTCTGCAAACTCCTACTCTG
TTGAGAGAAACAAATCTGAGATTTCATACATTTCTCTCATCTGAAAGATCAAAGCAATGAGAACTCACCTTTTACTTCTTGGTTTGTTCTTCTGTTTCCTTCTCTTAAGT
GCTTCTTTCATGGACACTGCCATGGCTGATTCAGACCGGTGCACAAGACCGTGTAGGAAGAGGTGCTCGAAAGCGAAGCTGAAGCGTCGGTGCATGAAGTATTGTAGAAT
ATGTTGCAGTAAATGTAAATGTGTGCCAGGGGGCTATGGGAAGCGCCATTGCCCTTGCTATAGCCATGTCCACACCATTAGAGGCAGGGCCAAGTGCCCTTAACTTTTAA
GACCATATGCATTTATTGTCTGTCCCTTATTGTTATTATTATTATTATTATGAAATCAAATAAGCCAACCTAAAATAGTACTATAGAAATGAAATGAGACCAAAATAATT
GTGTCTGATTTCAATATTAAGTACTGCTTCAAAGTTTGAATGTGAGGTTTGTTTGGTGTGCTTTTTTAATAATAATAAACTATGTGTATTTATGATGTGCCTTTGATTAT
TGTATTTTATTATTCAAGGCCTTCTTCTATTTTATTATATTCTAATTTATGTACCTAAAAGATTCAGTGGTTGATGAATTTTCATTCAATAAATAAGGACAGTAATGTTA
TGTATTAT
Protein sequenceShow/hide protein sequence
MRTHLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGGYGKRHCPCYSHVHTIRGRAKCP