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CSPI07G07110 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G07110
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGRF-type domain-containing protein
Genome locationChr7:5159603..5162451
RNA-Seq ExpressionCSPI07G07110
SyntenyCSPI07G07110
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR010666 - Zinc finger, GRF-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645848.1 hypothetical protein Csa_017077 [Cucumis sativus]1.5e-7495.92Show/hide
Query:  MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTE
        MSSSEIYEESYLEC CGVAAKLRMSHTEK PFRLFYNCPKEISQQCGFFHWADE EPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREK E
Subjt:  MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTE

Query:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVI
        LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNT+ I
Subjt:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVI

KAF2294607.1 hypothetical protein GH714_013386 [Hevea brasiliensis]1.4e-4054.36Show/hide
Query:  SSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTEL
        S    +E+S + C CG+ AKLR+S T ++PFRLFYNCP+  + QCGFF W DEP P+ DRH +E++LIRN C RL  RLDEI + HE+++  WEREK+EL
Subjt:  SSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTEL

Query:  TLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVIYTL
         LKLST+QT+LD+I  R+R  NES  MPP ++L I DD+ D+ + I+T+
Subjt:  TLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVIYTL

XP_004136954.1 uncharacterized protein LOC101219463 [Cucumis sativus]2.5e-7797.33Show/hide
Query:  MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTE
        MSSSEIYEESYLEC CGVAAKLRMSHTEK PFRLFYNCPKEISQQCGFFHWADE EPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREK E
Subjt:  MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTE

Query:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVIYTL
        LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVIYTL
Subjt:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVIYTL

XP_008455003.1 PREDICTED: uncharacterized protein LOC103495284 [Cucumis melo]1.7e-7391.39Show/hide
Query:  MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTE
        MSSSEIYEESYLEC CG AAKLRMSHTEK+PFRLFYNCPKE+SQQCGFFHWADEPEPS+DRHANELDLIRNVCIRLTERLDEI+EEHEDEKEEWEREK E
Subjt:  MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTE

Query:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDN-TLVIYTL
        LTLKLSTLQTQLDDI+NR+RITNESFSMPPFESLSIRDDDD+N TLV+Y L
Subjt:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDN-TLVIYTL

XP_022148840.1 uncharacterized protein LOC111017399 [Momordica charantia]2.0e-5874Show/hide
Query:  MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTE
        MS+SEI+EES LEC CG+ AKLR S T K+PFRLFYNCPKEISQQCGFFHWADEPEPS+DRH  EL+LIRNVC+ L +RLDEI EEH++EK EWER+K E
Subjt:  MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTE

Query:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVIYTL
        LTL+L TLQ+QLDDI +R+R+ NESFSMPP ++LSIRDD+ D+ LVIYTL
Subjt:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVIYTL

TrEMBL top hitse value%identityAlignment
A0A0A0K2H6 GRF-type domain-containing protein1.2e-7797.33Show/hide
Query:  MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTE
        MSSSEIYEESYLEC CGVAAKLRMSHTEK PFRLFYNCPKEISQQCGFFHWADE EPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREK E
Subjt:  MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTE

Query:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVIYTL
        LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVIYTL
Subjt:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVIYTL

A0A1S4E0B8 uncharacterized protein LOC1034952848.0e-7491.39Show/hide
Query:  MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTE
        MSSSEIYEESYLEC CG AAKLRMSHTEK+PFRLFYNCPKE+SQQCGFFHWADEPEPS+DRHANELDLIRNVCIRLTERLDEI+EEHEDEKEEWEREK E
Subjt:  MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTE

Query:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDN-TLVIYTL
        LTLKLSTLQTQLDDI+NR+RITNESFSMPPFESLSIRDDDD+N TLV+Y L
Subjt:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDN-TLVIYTL

A0A5A7SJM5 GRF-type domain-containing protein8.0e-7491.39Show/hide
Query:  MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTE
        MSSSEIYEESYLEC CG AAKLRMSHTEK+PFRLFYNCPKE+SQQCGFFHWADEPEPS+DRHANELDLIRNVCIRLTERLDEI+EEHEDEKEEWEREK E
Subjt:  MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTE

Query:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDN-TLVIYTL
        LTLKLSTLQTQLDDI+NR+RITNESFSMPPFESLSIRDDDD+N TLV+Y L
Subjt:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDN-TLVIYTL

A0A6A6L2I8 GRF-type domain-containing protein6.9e-4154.36Show/hide
Query:  SSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTEL
        S    +E+S + C CG+ AKLR+S T ++PFRLFYNCP+  + QCGFF W DEP P+ DRH +E++LIRN C RL  RLDEI + HE+++  WEREK+EL
Subjt:  SSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTEL

Query:  TLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVIYTL
         LKLST+QT+LD+I  R+R  NES  MPP ++L I DD+ D+ + I+T+
Subjt:  TLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVIYTL

A0A6J1D427 uncharacterized protein LOC1110173999.5e-5974Show/hide
Query:  MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTE
        MS+SEI+EES LEC CG+ AKLR S T K+PFRLFYNCPKEISQQCGFFHWADEPEPS+DRH  EL+LIRNVC+ L +RLDEI EEH++EK EWER+K E
Subjt:  MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTE

Query:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVIYTL
        LTL+L TLQ+QLDDI +R+R+ NESFSMPP ++LSIRDD+ D+ LVIYTL
Subjt:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVIYTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCATCGGAAATTTACGAGGAATCATATCTAGAATGTGACTGTGGCGTGGCGGCAAAACTAAGAATGTCTCATACAGAAAAAAGTCCATTCAGGTTATTCTACAA
CTGTCCAAAGGAGATATCTCAACAATGTGGTTTCTTTCATTGGGCTGATGAACCCGAACCATCCAATGACAGACACGCCAATGAACTAGACTTGATCAGAAATGTGTGTA
TTCGTCTAACAGAAAGGTTGGATGAAATCGTAGAGGAACATGAGGATGAGAAAGAAGAGTGGGAAAGGGAAAAGACTGAGCTAACATTGAAACTGTCAACTCTGCAAACT
CAGCTTGATGATATTCATAATAGAGTAAGGATTACCAATGAATCGTTTTCAATGCCTCCTTTTGAGTCACTTTCCATTAGAGACGACGACGACGACAACACGTTAGTTAT
ATATACTTTGTAA
mRNA sequenceShow/hide mRNA sequence
TAGGAATTGCTTTTGTAGTTTGCTCTTCACTCGATAACCTTCAAACTCCTAAACACTCACTCTTGGTTGTATCAATGCAACGAAGATCTTCCTTGCCTTCTTCAATCGAT
TCCTCCATTTTACCAACCACGCTCTTTTAGGATCCATAGTTAAACAATGTCTTCATCGGAAATTTACGAGGAATCATATCTAGAATGTGACTGTGGCGTGGCGGCAAAAC
TAAGAATGTCTCATACAGAAAAAAGTCCATTCAGGTTATTCTACAACTGTCCAAAGGAGATATCTCAACAATGTGGTTTCTTTCATTGGGCTGATGAACCCGAACCATCC
AATGACAGACACGCCAATGAACTAGACTTGATCAGAAATGTGTGTATTCGTCTAACAGAAAGGTTGGATGAAATCGTAGAGGAACATGAGGATGAGAAAGAAGAGTGGGA
AAGGGAAAAGACTGAGCTAACATTGAAACTGTCAACTCTGCAAACTCAGCTTGATGATATTCATAATAGAGTAAGGATTACCAATGAATCGTTTTCAATGCCTCCTTTTG
AGTCACTTTCCATTAGAGACGACGACGACGACAACACGTTAGTTATATATACTTTGTAAATAGTTCGATGTAAATTATATGGAGTGAAGTGTGAGATCATCTAAAACAAT
TAGCTACCTATTTTGGGTACGGGTTGAGTTTGACTTTTTTGTTTTTCTATGACCCCTCAAAATGTTGTTGTTTGAAAGCTAAGAGTCTAAGACAGCAGGAGAGGATAGGT
TATCGGCAGTCTCTACTCGATAACTATTTTGTAAATTTTGTTTTATTTTCTGAGAGTGAATAATGAGAACTTGAAGCTTCTAAATGAAATTGGCACCTTGATTGGTTTTT
TTTTCA
Protein sequenceShow/hide protein sequence
MSSSEIYEESYLECDCGVAAKLRMSHTEKSPFRLFYNCPKEISQQCGFFHWADEPEPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKTELTLKLSTLQT
QLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTLVIYTL