; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI07G07590 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G07590
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationChr7:5413636..5417411
RNA-Seq ExpressionCSPI07G07590
SyntenyCSPI07G07590
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031301.1 Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa]8.8e-12089.8Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQK
        MGDSHTPSF+S PLADRQSPMP AS+TTDSTGFNSESHSSSIT+DGSK F DSHHC QLDAEQTHWTDEKHR +LDSLEASFVQGLHQHR MHALS KQK
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQK

Query:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
        MRRKPI  D SSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEC SCSDRRHIR+MTNSC SARNSQ TRPCC
Subjt:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQ
         NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKASS F D+AQ
Subjt:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQ

XP_004136978.1 cold-regulated protein 27 isoform X1 [Cucumis sativus]5.3e-14199.21Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQK
        MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRL+LDSLEASFVQ LHQHRPMHALSPKQK
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQK

Query:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
        MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
Subjt:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
        CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
Subjt:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

XP_008454952.1 PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo]2.7e-12490.12Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQK
        MGDSHTPSF+S PLADRQSPMP AS+TTDSTGFNSESHSSSIT+DGSK F DSHHC QLDAEQTHWTDEKHR +LDSLEASFVQGLHQHR MHALS KQK
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQK

Query:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
        MRRKPI  D SSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEC SCSDRRHIR+MTNSC SARNSQ TRPCC
Subjt:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
         NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKASS F D+AQVVPFKRLS
Subjt:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

XP_011658902.1 cold-regulated protein 28 isoform X2 [Cucumis sativus]2.4e-10983.4Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQK
        MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRL+LDSLEASFVQ LHQHRPMHALSPKQK
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQK

Query:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
        MRRKPIRPDISSSE+         + +I                       H  S  KQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
Subjt:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
        CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
Subjt:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

XP_022952081.1 uncharacterized protein LOC111454842 isoform X2 [Cucurbita moschata]1.9e-9371.09Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSK---HFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSP
        M D+HTPS +SPP+ADR+SPM +++  +D T  NSES+SSS T+D S+       SHHC QLDA QTHWT+EKHRLFLDSLEASFVQ LH++R + ALS 
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSK---HFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSP

Query:  KQKMRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTR
        KQKMRRKPI P+ISSSE MVLQDASWQKAN+GR DPLLDKTADSPAILED+WINHFPSAG QC+LET D+LEEC SCSDR HIR  TNS +SAR+SQ   
Subjt:  KQKMRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTR

Query:  PCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
        PCC +S+TI+TEVSDQNFVD  PGELS G PI KRLKKASSD S + +V P+KRLS
Subjt:  PCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

TrEMBL top hitse value%identityAlignment
A0A0A0K7Z2 Uncharacterized protein2.6e-14199.21Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQK
        MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRL+LDSLEASFVQ LHQHRPMHALSPKQK
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQK

Query:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
        MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
Subjt:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
        CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
Subjt:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

A0A1S3BZQ8 uncharacterized protein LOC103495241 isoform X25.8e-9374.31Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQK
        MGDSHTPSF+S PLADRQSPMP AS+TTDSTGFNSESHSSSIT+DGSK F DSHHC QLDAEQTHWTDEKHR +LDSLEASFVQGLHQHR MHALS KQK
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQK

Query:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
        MRRKPI  D SSSE+         + +I                       H  S  KQCSLETPDLLEEC SCSDRRHIR+MTNSC SARNSQ TRPCC
Subjt:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
         NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKASS F D+AQVVPFKRLS
Subjt:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

A0A1S3BZU8 uncharacterized protein LOC103495241 isoform X11.3e-12490.12Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQK
        MGDSHTPSF+S PLADRQSPMP AS+TTDSTGFNSESHSSSIT+DGSK F DSHHC QLDAEQTHWTDEKHR +LDSLEASFVQGLHQHR MHALS KQK
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQK

Query:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
        MRRKPI  D SSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEC SCSDRRHIR+MTNSC SARNSQ TRPCC
Subjt:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
         NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKASS F D+AQVVPFKRLS
Subjt:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

A0A5D3C4A3 Cold regulated protein 27, putative isoform 24.3e-12089.8Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQK
        MGDSHTPSF+S PLADRQSPMP AS+TTDSTGFNSESHSSSIT+DGSK F DSHHC QLDAEQTHWTDEKHR +LDSLEASFVQGLHQHR MHALS KQK
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQK

Query:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
        MRRKPI  D SSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEC SCSDRRHIR+MTNSC SARNSQ TRPCC
Subjt:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQ
         NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKASS F D+AQ
Subjt:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQ

A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X29.0e-9471.09Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSK---HFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSP
        M D+HTPS +SPP+ADR+SPM +++  +D T  NSES+SSS T+D S+       SHHC QLDA QTHWT+EKHRLFLDSLEASFVQ LH++R + ALS 
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSK---HFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSP

Query:  KQKMRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTR
        KQKMRRKPI P+ISSSE MVLQDASWQKAN+GR DPLLDKTADSPAILED+WINHFPSAG QC+LET D+LEEC SCSDR HIR  TNS +SAR+SQ   
Subjt:  KQKMRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTR

Query:  PCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS
        PCC +S+TI+TEVSDQNFVD  PGELS G PI KRLKKASSD S + +V P+KRLS
Subjt:  PCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 273.6e-0729.21Show/hide
Query:  QTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQKMR--------RKPIRPDISSSELMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINH
        +T WT+EKH L+L S+EASFV  L  +  + AL   + +         RKP     S  +  VL D  WQK N+ + +  ++     +S   L   WI H
Subjt:  QTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQKMR--------RKPIRPDISSSELMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINH

Query:  FPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFV-DNQPGELSSGMPIAKRLKKA-SSDFSDSAQVVPFK
        +    K     T +   +  S S+ +     + S  S +                 EVSDQNFV +   GE  S    +K++K    S+ S + QVVP  
Subjt:  FPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFV-DNQPGELSSGMPIAKRLKKA-SSDFSDSAQVVPFK

Query:  RL
        +L
Subjt:  RL

Q8L983 Cold-regulated protein 283.4e-0532.77Show/hide
Query:  ASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQKMRRKPIRPDI--SSSELMVLQDA
        ASA + S    S S  S +T + S+   D    S+LD E T WT+EKH  +LD LE+SFV+ L+    +     ++  R + ++ +   S+ +  VLQ+ 
Subjt:  ASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQKMRRKPIRPDI--SSSELMVLQDA

Query:  SWQKANIGRNDPLLDKTAD
         WQK N G+    L+ +++
Subjt:  SWQKANIGRNDPLLDKTAD

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)2.4e-0632.77Show/hide
Query:  ASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQKMRRKPIRPDI--SSSELMVLQDA
        ASA + S    S S  S +T + S+   D    S+LD E T WT+EKH  +LD LE+SFV+ L+    +     ++  R + ++ +   S+ +  VLQ+ 
Subjt:  ASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQKMRRKPIRPDI--SSSELMVLQDA

Query:  SWQKANIGRNDPLLDKTAD
         WQK N G+    L+ +++
Subjt:  SWQKANIGRNDPLLDKTAD

AT4G33980.2 FUNCTIONS IN: molecular_function unknown2.4e-0632.77Show/hide
Query:  ASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQKMRRKPIRPDI--SSSELMVLQDA
        ASA + S    S S  S +T + S+   D    S+LD E T WT+EKH  +LD LE+SFV+ L+    +     ++  R + ++ +   S+ +  VLQ+ 
Subjt:  ASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQKMRRKPIRPDI--SSSELMVLQDA

Query:  SWQKANIGRNDPLLDKTAD
         WQK N G+    L+ +++
Subjt:  SWQKANIGRNDPLLDKTAD

AT5G42900.1 cold regulated gene 272.6e-0829.21Show/hide
Query:  QTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQKMR--------RKPIRPDISSSELMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINH
        +T WT+EKH L+L S+EASFV  L  +  + AL   + +         RKP     S  +  VL D  WQK N+ + +  ++     +S   L   WI H
Subjt:  QTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQKMR--------RKPIRPDISSSELMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINH

Query:  FPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFV-DNQPGELSSGMPIAKRLKKA-SSDFSDSAQVVPFK
        +    K     T +   +  S S+ +     + S  S +                 EVSDQNFV +   GE  S    +K++K    S+ S + QVVP  
Subjt:  FPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFV-DNQPGELSSGMPIAKRLKKA-SSDFSDSAQVVPFK

Query:  RL
        +L
Subjt:  RL

AT5G42900.2 cold regulated gene 272.6e-0829.21Show/hide
Query:  QTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQKMR--------RKPIRPDISSSELMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINH
        +T WT+EKH L+L S+EASFV  L  +  + AL   + +         RKP     S  +  VL D  WQK N+ + +  ++     +S   L   WI H
Subjt:  QTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQKMR--------RKPIRPDISSSELMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINH

Query:  FPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFV-DNQPGELSSGMPIAKRLKKA-SSDFSDSAQVVPFK
        +    K     T +   +  S S+ +     + S  S +                 EVSDQNFV +   GE  S    +K++K    S+ S + QVVP  
Subjt:  FPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFV-DNQPGELSSGMPIAKRLKKA-SSDFSDSAQVVPFK

Query:  RL
        +L
Subjt:  RL

AT5G42900.3 cold regulated gene 274.0e-0930.05Show/hide
Query:  QTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQKMR--------RKPIRPDISSSELMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINH
        +T WT+EKH L+L S+EASFV  L  +  + AL   + +         RKP     S  +  VL D  WQK N+ + +  ++     +S   L   WI H
Subjt:  QTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQKMR--------RKPIRPDISSSELMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINH

Query:  FPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARN-SQPTRPCCCNSYTIITEVSDQNFV-DNQPGELSSGMPIAKRLKKA-SSDFSDSAQVVPF
        +    K     T +   +  S S+ +     + S  S +  S  +R    +  ++  EVSDQNFV +   GE  S    +K++K    S+ S + QVVP 
Subjt:  FPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARN-SQPTRPCCCNSYTIITEVSDQNFV-DNQPGELSSGMPIAKRLKKA-SSDFSDSAQVVPF

Query:  KRL
         +L
Subjt:  KRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGACTCTCATACGCCGTCGTTTCTCTCCCCGCCGCTTGCAGATCGACAATCACCCATGCCGCTGGCCTCTGCTACTACCGACTCCACTGGCTTCAACTCGGAATC
TCACTCTTCTTCCATTACTCTTGATGGGTCCAAGCATTTTTTCGATTCTCATCATTGTTCGCAACTGGATGCGGAGCAAACACATTGGACAGACGAGAAACATAGATTAT
TTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCCTATGCATGCTTTATCCCCAAAACAGAAGATGCGTCGGAAGCCGATCAGGCCTGATATA
TCTTCTTCAGAGTTGATGGTCCTTCAAGATGCCTCTTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATAAGACTGCTGATTCTCCTGCTATTTTAGAGGA
TCTATGGATAAATCATTTTCCTTCTGCAGGAAAGCAGTGTAGTTTGGAAACTCCTGATCTCCTTGAAGAATGTGAAAGTTGTAGTGATAGGAGACACATAAGATACATGA
CGAACTCCTGTAGATCTGCCAGAAATTCTCAGCCGACCCGTCCATGCTGTTGTAATTCTTATACAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATAATCAACCA
GGAGAGTTGTCTAGTGGCATGCCTATTGCAAAAAGATTAAAGAAAGCTTCTTCTGATTTTTCAGACAGTGCCCAGGTTGTACCATTTAAAAGATTATCCTAA
mRNA sequenceShow/hide mRNA sequence
CTTTCACCGCTTCTCTCTCTCTCTCTCTCTCTCCCTCTCCATTTCTCCACGAGCTTGAATCCCCAGAGGGTTTCGGACCTAAATTTTCTCCCACCATTTCAATTTTCTCT
TTGATTTCATCCTCCATTTTTGGCTCTTCCGAATCATTTCTCCTTCTTTTTGATCCCTCCGAAATGGGTGACTCTCATACGCCGTCGTTTCTCTCCCCGCCGCTTGCAGA
TCGACAATCACCCATGCCGCTGGCCTCTGCTACTACCGACTCCACTGGCTTCAACTCGGAATCTCACTCTTCTTCCATTACTCTTGATGGGTCCAAGCATTTTTTCGATT
CTCATCATTGTTCGCAACTGGATGCGGAGCAAACACATTGGACAGACGAGAAACATAGATTATTTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACAT
AGGCCTATGCATGCTTTATCCCCAAAACAGAAGATGCGTCGGAAGCCGATCAGGCCTGATATATCTTCTTCAGAGTTGATGGTCCTTCAAGATGCCTCTTGGCAGAAGGC
TAACATTGGGAGGAATGATCCTTTATTGGATAAGACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCATTTTCCTTCTGCAGGAAAGCAGTGTAGTTTGG
AAACTCCTGATCTCCTTGAAGAATGTGAAAGTTGTAGTGATAGGAGACACATAAGATACATGACGAACTCCTGTAGATCTGCCAGAAATTCTCAGCCGACCCGTCCATGC
TGTTGTAATTCTTATACAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATAATCAACCAGGAGAGTTGTCTAGTGGCATGCCTATTGCAAAAAGATTAAAGAAAGC
TTCTTCTGATTTTTCAGACAGTGCCCAGGTTGTACCATTTAAAAGATTATCCTAAAAAAGATCAAAAACCAGATGGCATATCTTCTGAGCATCTTCAAAACTTTGTGCCT
CCAAATTCAGATTTGTGTTACTGCGTAAGAGGGAGCTGACAACAATTCATTCCAACATGTGAACAGCCAGATTTGTGATACGGTTTTGTTTTCATTTCAGAAGAGCATTG
TAAAGAAAGTAAGGAAAGTGACAACAATAATTTTACCAGAAGATCTGCGGCAGTAAGGAGAACATATGTTTGTATATGGTACAAGCTAAACTTTTACGTAGTTCAAATAT
TGAGTGAAATACATGTTGACCCTATCTTTTCTCCTGGTTTCCTTTTTCTTGGAGTTTAAAAGGATGGAAATTCTACAACTA
Protein sequenceShow/hide protein sequence
MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLFLDSLEASFVQGLHQHRPMHALSPKQKMRRKPIRPDI
SSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQP
GELSSGMPIAKRLKKASSDFSDSAQVVPFKRLS