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CSPI07G07830 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G07830
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiontype IV secretion system protein virB10-like
Genome locationChr7:5600610..5601312
RNA-Seq ExpressionCSPI07G07830
SyntenyCSPI07G07830
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645870.1 hypothetical protein Csa_017149 [Cucumis sativus]4.5e-67100Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG
        MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG

Query:  GPPPEIKQSAHADADAKGENLQSAAPGTGG
        GPPPEIKQSAHADADAKGENLQSAAPGTGG
Subjt:  GPPPEIKQSAHADADAKGENLQSAAPGTGG

KAG6571994.1 hypothetical protein SDJN03_28722, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5284.21Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLD-PPPPPPHLRHPPPLDSVPVAEPL
        MSTP+DQLQPPP  HS + SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYD+E+WVEKKCASCLDGSLD PPPPPPHLRHPPPLD+VPV EPL
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLD-PPPPPPHLRHPPPLDSVPVAEPL

Query:  GGPPPEIKQSAHADADAKGENLQSAAPGTGGES
        GG PPEIKQ     AD K ENLQSAAPGTGGES
Subjt:  GGPPPEIKQSAHADADAKGENLQSAAPGTGGES

KAG7011671.1 hypothetical protein SDJN02_26577, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-5383.7Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLD---PPPPPPHLRHPPPLDSVPVAE
        MSTP+DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYD+E+WVEKKCASCLDGSLD   PPPPPPHLRHPPPLD+VPV E
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLD---PPPPPPHLRHPPPLDSVPVAE

Query:  PLGGPPPEIKQSAHADADAKGENLQSAAPGTGGES
        PLGG PPEIKQ     AD K ENLQSAAPGTGGES
Subjt:  PLGGPPPEIKQSAHADADAKGENLQSAAPGTGGES

XP_008455516.1 PREDICTED: type IV secretion system protein virB10-like [Cucumis melo]1.5e-6294.12Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLD----PPPPPPHLRHPPPLDSVPVA
        MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYD+EDWVEKKCASCLDGSLD    PPPPPPHLRHPPPLDSVPVA
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLD----PPPPPPHLRHPPPLDSVPVA

Query:  EPLGGPPPEIKQSAHADADAKGENLQSAAPGTGGES
        EPLGGPPPEIKQ   ADADAKGENLQSAAPGTGGES
Subjt:  EPLGGPPPEIKQSAHADADAKGENLQSAAPGTGGES

XP_038887147.1 uncharacterized protein LOC120077337 [Benincasa hispida]2.5e-5787.59Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLD-PPPPPPHLRHPPPLDSVPVAEPL
        MSTP+DQLQPPP LHS+HASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYD+EDW+EKKCASCLDGSLD PPPPPPHLR PP LDSVPVAEPL
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLD-PPPPPPHLRHPPPLDSVPVAEPL

Query:  GGPPPEIKQSAHADA----DAKGENLQSAAPGTGGES
        GGPPPEIKQ A ADA    D K ENLQSA PGTGGES
Subjt:  GGPPPEIKQSAHADA----DAKGENLQSAAPGTGGES

TrEMBL top hitse value%identityAlignment
A0A0A0K6N4 Uncharacterized protein2.6e-68100Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG
        MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG

Query:  GPPPEIKQSAHADADAKGENLQSAAPGTGGES
        GPPPEIKQSAHADADAKGENLQSAAPGTGGES
Subjt:  GPPPEIKQSAHADADAKGENLQSAAPGTGGES

A0A1S3C1T9 type IV secretion system protein virB10-like7.3e-6394.12Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLD----PPPPPPHLRHPPPLDSVPVA
        MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYD+EDWVEKKCASCLDGSLD    PPPPPPHLRHPPPLDSVPVA
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLD----PPPPPPHLRHPPPLDSVPVA

Query:  EPLGGPPPEIKQSAHADADAKGENLQSAAPGTGGES
        EPLGGPPPEIKQ   ADADAKGENLQSAAPGTGGES
Subjt:  EPLGGPPPEIKQSAHADADAKGENLQSAAPGTGGES

A0A5A7SPN0 Type IV secretion system protein virB10-like7.3e-6394.12Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLD----PPPPPPHLRHPPPLDSVPVA
        MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYD+EDWVEKKCASCLDGSLD    PPPPPPHLRHPPPLDSVPVA
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLD----PPPPPPHLRHPPPLDSVPVA

Query:  EPLGGPPPEIKQSAHADADAKGENLQSAAPGTGGES
        EPLGGPPPEIKQ   ADADAKGENLQSAAPGTGGES
Subjt:  EPLGGPPPEIKQSAHADADAKGENLQSAAPGTGGES

A0A6J1GL66 uncharacterized protein LOC1114553835.8e-5283.97Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLD-PPPPPPHLRHPPPLDSVPVAEPL
        MSTP+DQLQPPP  HS + SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYD+E+WVEKKCASCLDGSLD PPPPPPHLRHPPPLD+VPV EPL
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLD-PPPPPPHLRHPPPLDSVPVAEPL

Query:  GGPPPEIKQSAHADADAKGENLQSAAPGTGG
        GG PPEIKQ     AD K ENLQSAAPGTGG
Subjt:  GGPPPEIKQSAHADADAKGENLQSAAPGTGG

A0A6J1IBA8 uncharacterized protein LOC1114709406.9e-5384.62Show/hide
Query:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG
        MSTP DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYD+E+WVEKKCASCLDGSLDPPPPP HLRHPPPLD+VPV EPLG
Subjt:  MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLG

Query:  GPPPEIKQSAHADADAKGENLQSAAPGTGG
        G PPEIKQ     AD K ENLQSAAPGTGG
Subjt:  GPPPEIKQSAHADADAKGENLQSAAPGTGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G26520.1 unknown protein2.8e-1443.33Show/hide
Query:  QPPPPLHSS----------HASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPP
        QPPP    S          ++++GP IAV  V+++L V+A +IGRLCSG+ + GYG  YD+E W E +C SC+DG + P  P P    PP
Subjt:  QPPPPLHSS----------HASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPP

AT3G57500.1 unknown protein1.2e-1244.21Show/hide
Query:  QPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDG-----SLDPPPPPPHLRHPPPLDSVPVAEP
        Q  P  +S H S+  L+ VLAVI+IL V+AG+  RLC GR +  +G  +D+E WVE+KC SC+D      S  P PPPP    PPP  +   ++P
Subjt:  QPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDG-----SLDPPPPPPHLRHPPPLDSVPVAEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACTCCCATCGACCAACTCCAGCCCCCCCCGCCCCTTCACTCCTCCCACGCCTCTGTCGGCCCCCTCATCGCCGTCCTCGCCGTCATTTCCATCCTTGGCGTCAT
TGCTGGTATGATTGGCCGCCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCACACTACGACCTCGAGGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGCT
CCCTCGACCCCCCTCCTCCTCCGCCTCATCTCCGCCACCCACCGCCTCTGGATTCTGTTCCTGTGGCTGAACCTCTTGGTGGGCCTCCGCCGGAGATCAAACAAAGCGCC
CATGCCGATGCTGATGCTAAAGGGGAGAATTTGCAGTCGGCGGCTCCTGGAACCGGCGGTGAGTCATGA
mRNA sequenceShow/hide mRNA sequence
AAATTTTCTTAAAAAGCAAAAACTGAGAAAGGCCATAAAGTGAGAGTGAGAGTGAGAGTGAGAGGCCACCTCTTTAGTCTATCACTTCTTCCGATATCTCTCACAACCCT
CAACTCTCTCTCTCTCTCTCTCTCTCTAAACCCAAATTCCAAAAACCCCTTTCCGCTCCTTTCACATGTCCACTCCCATCGACCAACTCCAGCCCCCCCCGCCCCTTCAC
TCCTCCCACGCCTCTGTCGGCCCCCTCATCGCCGTCCTCGCCGTCATTTCCATCCTTGGCGTCATTGCTGGTATGATTGGCCGCCTCTGCTCCGGCCGCCCCGTCTTCGG
CTACGGCGCACACTACGACCTCGAGGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGCTCCCTCGACCCCCCTCCTCCTCCGCCTCATCTCCGCCACCCACCGC
CTCTGGATTCTGTTCCTGTGGCTGAACCTCTTGGTGGGCCTCCGCCGGAGATCAAACAAAGCGCCCATGCCGATGCTGATGCTAAAGGGGAGAATTTGCAGTCGGCGGCT
CCTGGAACCGGCGGTGAGTCATGAGATTTAATAAGAAGAGTAAAGTTGTTTCCTTTTTTTCTTTGTTCTTCTTTTTTATGGTTCAATTTTTATTCTTTTACAAATCCTAT
CTGGTGGATGAATGAATGAATCTTTGCCTCTTTTATATTTATA
Protein sequenceShow/hide protein sequence
MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLGGPPPEIKQSA
HADADAKGENLQSAAPGTGGES