| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0052114.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.6e-27 | 54.61 | Show/hide |
Query: GEQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVAKRK--------EDLVLAISTSEVVQLRLGLIGLTKENWTQELLAVILLGILRISPSFKFYDPTSRSF
G+QR GPFAKYLE+CGIV QY MP KPSMNGV +R+ LVL I TS VVQLRL L GLTKENWTQELLA ILLG +I
Subjt: GEQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVAKRK--------EDLVLAISTSEVVQLRLGLIGLTKENWTQELLAVILLGILRISPSFKFYDPTSRSF
Query: FETENARFLEDVEFEAPILDFTIKPIIEQDNNKVLVEPKVQTRQPQEVPLEK
N ++DV + PI DFT++P IEQDNN+VL +VQT+Q QE+PL +
Subjt: FETENARFLEDVEFEAPILDFTIKPIIEQDNNKVLVEPKVQTRQPQEVPLEK
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| KYP41105.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 1.0e-26 | 30.26 | Show/hide |
Query: MDLDLALRIDKPTSTKEQLNTTNIEKWELSNCMNLMIIRHSIPESFRGSITESENAKKCFVEIEKYFAKNGKGEAKKGLLKKDCLKY-------------
MDLDLA R++KPT T E L+ +EKWE SN M LMI++ S+PE F+GSI+ES+N K +E YF N K +A++ K ++Y
Subjt: MDLDLALRIDKPTSTKEQLNTTNIEKWELSNCMNLMIIRHSIPESFRGSITESENAKKCFVEIEKYFAKNGKGEAKKGLLKKDCLKY-------------
Query: -----------------AKWHVSLAYVPTDI--------------------------MDQGEQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVAKRK----
H+ L +PT ++ ++ A +L +CGI QYTMP KPSMNGVA+R+
Subjt: -----------------AKWHVSLAYVPTDI--------------------------MDQGEQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVAKRK----
Query: EDLVL---------------AISTSEVVQLRLGLIGLTK---ENWT-----------------------------QELLAVILLGILRISPSFKFYDPTS
+D+V A+ T+ + R+ + K E WT ++ +G S +KFY+PT+
Subjt: EDLVL---------------AISTSEVVQLRLGLIGLTK---ENWT-----------------------------QELLAVILLGILRISPSFKFYDPTS
Query: RSFFETENARFLEDVEF------------EAPILD-------FTI---KPII------------EQDNNKVLVE-PKVQTRQPQEVPLEK
RSFFET NARFLEDVEF E P++D TI P+I QDN +VL + P Q +QPQEVPL +
Subjt: RSFFETENARFLEDVEF------------EAPILD-------FTI---KPII------------EQDNNKVLVE-PKVQTRQPQEVPLEK
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| RVW95606.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.7e-27 | 27.81 | Show/hide |
Query: MDLDLALRIDKP---TSTKEQLNTTNIEKWELSNCMNLMIIRHSIPESFRGSITESENAKKCFVEIEKYFAKNGKGE-----------------------
MDLD ALR D+P TS + +EKWE SN M+LMI++HSIPE+ RG + E AK +IE FA N K E
Subjt: MDLDLALRIDKP---TSTKEQLNTTNIEKWELSNCMNLMIIRHSIPESFRGSITESENAKKCFVEIEKYFAKNGKGE-----------------------
Query: ---------------------------------------------------------------------------AKKGLLKKDCLKYAKWHVSLAYVPT
K G +KK C KY WH A V
Subjt: ---------------------------------------------------------------------------AKKGLLKKDCLKYAKWHVSLAYVPT
Query: DIMDQ-------------------GEQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVAKRKEDLVLAISTSEVVQLRLGLIGLTKENWTQELLAVILLGIL
+ + GEQR PFAKYL +CGIV QYTM S NGV +R+ + ++V+ + L + W + + + IL
Subjt: DIMDQ-------------------GEQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVAKRKEDLVLAISTSEVVQLRLGLIGLTKENWTQELLAVILLGIL
Query: RISPS------------------------FKFYDPTSRSFFETENARFLEDVE-----------FEAPILDFTIKPIIEQDNNKVLVEPKVQTRQP----
PS FKFYDP++RSFFET N +F+EDVE FE +F PII ++ + +Q QP
Subjt: RISPS------------------------FKFYDPTSRSFFETENARFLEDVE-----------FEAPILDFTIKPIIEQDNNKVLVEPKVQTRQP----
Query: ---------------------------------------QEVPL-EKKEVIMALVAHLDLELHQMDVKTVFLNENIVQTIYMT-PSNDVSLLYDIKRLLK
E+P+ + +IMAL+AH DL+LHQMDVKT FLN NI +TIYM P N S D K+L+
Subjt: ---------------------------------------QEVPL-EKKEVIMALVAHLDLELHQMDVKTVFLNENIVQTIYMT-PSNDVSLLYDIKRLLK
Query: KNFEIKD
+F+ K+
Subjt: KNFEIKD
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| RVX19364.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.5e-28 | 31 | Show/hide |
Query: MDLDLALRIDKP-----TSTKEQLNTTNIEKWELSNCMNLMIIRHSIPESFRGSITESENAKKCFVEIEKYFAKNGKGEAKKGLLKKDCLKY--------
MDLD ALR ++P ST EQ +T +EKWE SNCM+LMI++HSIPE+ R +I E AK +I FA N K E +LK + +
Subjt: MDLDLALRIDKP-----TSTKEQLNTTNIEKWELSNCMNLMIIRHSIPESFRGSITESENAKKCFVEIEKYFAKNGKGEAKKGLLKKDCLKY--------
Query: --AKWHVSL-------AYVPTD------------------------------IMDQG-----------EQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVA
A H+S+ + +PTD D+G EQ LGPFAKYL +CGIV QYTMP PS NGVA
Subjt: --AKWHVSL-------AYVPTD------------------------------IMDQG-----------EQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVA
Query: KRKEDLVLAISTSEVVQLRLGLIGLTKENWTQELLAVILLGILRISPSFKFYDPTSRSFFETENARFLEDVEFEA--PILDFTIKPIIEQDNNKV----L
+R+ + + V+ R ++ ++ +G S FKFYD ++R FFET NA+F+EDVE P+ K QD K+ +
Subjt: KRKEDLVLAISTSEVVQLRLGLIGLTKENWTQELLAVILLGILRISPSFKFYDPTSRSFFETENARFLEDVEFEA--PILDFTIKPIIEQDNNKV----L
Query: VEP----KVQTRQPQE----VPLEKKE-------------------------------------------------------------------------
+EP + T+QPQE VPL +
Subjt: VEP----KVQTRQPQE----VPLEKKE-------------------------------------------------------------------------
Query: --VIMALVAHLDLELHQMDVKTVFLNENIVQTIYMTPSNDVSLLYDIKRLLKKNFEIKDLEYGSFVTTRIW
+IMALVAH DLELHQM+VK FLN NI +TIYM S + D K+ + + +K YG T+R W
Subjt: --VIMALVAHLDLELHQMDVKTVFLNENIVQTIYMTPSNDVSLLYDIKRLLKKNFEIKDLEYGSFVTTRIW
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| TYJ98082.1 uncharacterized protein E5676_scaffold565G00130 [Cucumis melo var. makuwa] | 1.6e-27 | 54.61 | Show/hide |
Query: GEQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVAKRK--------EDLVLAISTSEVVQLRLGLIGLTKENWTQELLAVILLGILRISPSFKFYDPTSRSF
G+QR GPFAKYLE+CGIV QY MP KPSMNGV +R+ LVL I TS VVQLRL L GLTKENWTQELLA ILLG +I
Subjt: GEQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVAKRK--------EDLVLAISTSEVVQLRLGLIGLTKENWTQELLAVILLGILRISPSFKFYDPTSRSF
Query: FETENARFLEDVEFEAPILDFTIKPIIEQDNNKVLVEPKVQTRQPQEVPLEK
N ++DV + PI DFT++P IEQDNN+VL +VQT+Q QE+PL +
Subjt: FETENARFLEDVEFEAPILDFTIKPIIEQDNNKVLVEPKVQTRQPQEVPLEK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A151RFD4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.0e-27 | 30.26 | Show/hide |
Query: MDLDLALRIDKPTSTKEQLNTTNIEKWELSNCMNLMIIRHSIPESFRGSITESENAKKCFVEIEKYFAKNGKGEAKKGLLKKDCLKY-------------
MDLDLA R++KPT T E L+ +EKWE SN M LMI++ S+PE F+GSI+ES+N K +E YF N K +A++ K ++Y
Subjt: MDLDLALRIDKPTSTKEQLNTTNIEKWELSNCMNLMIIRHSIPESFRGSITESENAKKCFVEIEKYFAKNGKGEAKKGLLKKDCLKY-------------
Query: -----------------AKWHVSLAYVPTDI--------------------------MDQGEQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVAKRK----
H+ L +PT ++ ++ A +L +CGI QYTMP KPSMNGVA+R+
Subjt: -----------------AKWHVSLAYVPTDI--------------------------MDQGEQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVAKRK----
Query: EDLVL---------------AISTSEVVQLRLGLIGLTK---ENWT-----------------------------QELLAVILLGILRISPSFKFYDPTS
+D+V A+ T+ + R+ + K E WT ++ +G S +KFY+PT+
Subjt: EDLVL---------------AISTSEVVQLRLGLIGLTK---ENWT-----------------------------QELLAVILLGILRISPSFKFYDPTS
Query: RSFFETENARFLEDVEF------------EAPILD-------FTI---KPII------------EQDNNKVLVE-PKVQTRQPQEVPLEK
RSFFET NARFLEDVEF E P++D TI P+I QDN +VL + P Q +QPQEVPL +
Subjt: RSFFETENARFLEDVEF------------EAPILD-------FTI---KPII------------EQDNNKVLVE-PKVQTRQPQEVPLEK
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| A0A438IFS9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-27 | 27.81 | Show/hide |
Query: MDLDLALRIDKP---TSTKEQLNTTNIEKWELSNCMNLMIIRHSIPESFRGSITESENAKKCFVEIEKYFAKNGKGE-----------------------
MDLD ALR D+P TS + +EKWE SN M+LMI++HSIPE+ RG + E AK +IE FA N K E
Subjt: MDLDLALRIDKP---TSTKEQLNTTNIEKWELSNCMNLMIIRHSIPESFRGSITESENAKKCFVEIEKYFAKNGKGE-----------------------
Query: ---------------------------------------------------------------------------AKKGLLKKDCLKYAKWHVSLAYVPT
K G +KK C KY WH A V
Subjt: ---------------------------------------------------------------------------AKKGLLKKDCLKYAKWHVSLAYVPT
Query: DIMDQ-------------------GEQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVAKRKEDLVLAISTSEVVQLRLGLIGLTKENWTQELLAVILLGIL
+ + GEQR PFAKYL +CGIV QYTM S NGV +R+ + ++V+ + L + W + + + IL
Subjt: DIMDQ-------------------GEQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVAKRKEDLVLAISTSEVVQLRLGLIGLTKENWTQELLAVILLGIL
Query: RISPS------------------------FKFYDPTSRSFFETENARFLEDVE-----------FEAPILDFTIKPIIEQDNNKVLVEPKVQTRQP----
PS FKFYDP++RSFFET N +F+EDVE FE +F PII ++ + +Q QP
Subjt: RISPS------------------------FKFYDPTSRSFFETENARFLEDVE-----------FEAPILDFTIKPIIEQDNNKVLVEPKVQTRQP----
Query: ---------------------------------------QEVPL-EKKEVIMALVAHLDLELHQMDVKTVFLNENIVQTIYMT-PSNDVSLLYDIKRLLK
E+P+ + +IMAL+AH DL+LHQMDVKT FLN NI +TIYM P N S D K+L+
Subjt: ---------------------------------------QEVPL-EKKEVIMALVAHLDLELHQMDVKTVFLNENIVQTIYMT-PSNDVSLLYDIKRLLK
Query: KNFEIKD
+F+ K+
Subjt: KNFEIKD
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| A0A438KDT7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.2e-28 | 31 | Show/hide |
Query: MDLDLALRIDKP-----TSTKEQLNTTNIEKWELSNCMNLMIIRHSIPESFRGSITESENAKKCFVEIEKYFAKNGKGEAKKGLLKKDCLKY--------
MDLD ALR ++P ST EQ +T +EKWE SNCM+LMI++HSIPE+ R +I E AK +I FA N K E +LK + +
Subjt: MDLDLALRIDKP-----TSTKEQLNTTNIEKWELSNCMNLMIIRHSIPESFRGSITESENAKKCFVEIEKYFAKNGKGEAKKGLLKKDCLKY--------
Query: --AKWHVSL-------AYVPTD------------------------------IMDQG-----------EQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVA
A H+S+ + +PTD D+G EQ LGPFAKYL +CGIV QYTMP PS NGVA
Subjt: --AKWHVSL-------AYVPTD------------------------------IMDQG-----------EQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVA
Query: KRKEDLVLAISTSEVVQLRLGLIGLTKENWTQELLAVILLGILRISPSFKFYDPTSRSFFETENARFLEDVEFEA--PILDFTIKPIIEQDNNKV----L
+R+ + + V+ R ++ ++ +G S FKFYD ++R FFET NA+F+EDVE P+ K QD K+ +
Subjt: KRKEDLVLAISTSEVVQLRLGLIGLTKENWTQELLAVILLGILRISPSFKFYDPTSRSFFETENARFLEDVEFEA--PILDFTIKPIIEQDNNKV----L
Query: VEP----KVQTRQPQE----VPLEKKE-------------------------------------------------------------------------
+EP + T+QPQE VPL +
Subjt: VEP----KVQTRQPQE----VPLEKKE-------------------------------------------------------------------------
Query: --VIMALVAHLDLELHQMDVKTVFLNENIVQTIYMTPSNDVSLLYDIKRLLKKNFEIKDLEYGSFVTTRIW
+IMALVAH DLELHQM+VK FLN NI +TIYM S + D K+ + + +K YG T+R W
Subjt: --VIMALVAHLDLELHQMDVKTVFLNENIVQTIYMTPSNDVSLLYDIKRLLKKNFEIKDLEYGSFVTTRIW
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| A0A5A7U9T3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.7e-28 | 54.61 | Show/hide |
Query: GEQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVAKRK--------EDLVLAISTSEVVQLRLGLIGLTKENWTQELLAVILLGILRISPSFKFYDPTSRSF
G+QR GPFAKYLE+CGIV QY MP KPSMNGV +R+ LVL I TS VVQLRL L GLTKENWTQELLA ILLG +I
Subjt: GEQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVAKRK--------EDLVLAISTSEVVQLRLGLIGLTKENWTQELLAVILLGILRISPSFKFYDPTSRSF
Query: FETENARFLEDVEFEAPILDFTIKPIIEQDNNKVLVEPKVQTRQPQEVPLEK
N ++DV + PI DFT++P IEQDNN+VL +VQT+Q QE+PL +
Subjt: FETENARFLEDVEFEAPILDFTIKPIIEQDNNKVLVEPKVQTRQPQEVPLEK
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| A0A5D3BE89 Integrase catalytic domain-containing protein | 7.7e-28 | 54.61 | Show/hide |
Query: GEQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVAKRK--------EDLVLAISTSEVVQLRLGLIGLTKENWTQELLAVILLGILRISPSFKFYDPTSRSF
G+QR GPFAKYLE+CGIV QY MP KPSMNGV +R+ LVL I TS VVQLRL L GLTKENWTQELLA ILLG +I
Subjt: GEQRLGPFAKYLEKCGIVSQYTMPEKPSMNGVAKRK--------EDLVLAISTSEVVQLRLGLIGLTKENWTQELLAVILLGILRISPSFKFYDPTSRSF
Query: FETENARFLEDVEFEAPILDFTIKPIIEQDNNKVLVEPKVQTRQPQEVPLEK
N ++DV + PI DFT++P IEQDNN+VL +VQT+Q QE+PL +
Subjt: FETENARFLEDVEFEAPILDFTIKPIIEQDNNKVLVEPKVQTRQPQEVPLEK
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