CuGenDBv2

Gene ID	CSPI07G08380
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	AvrRpt-cleavage domain-containing protein
Genome location	Chr7:6163632..6165832
RNA-Seq Expression	CSPI07G08380
Synteny	CSPI07G08380
Gene Ontology terms	GO:0005886 - plasma membrane (cellular component)
InterPro domains	IPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site IPR040387 - RPM1-interacting protein 4/NOI4

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004148923.1 protein NOI4 [Cucumis sativus]

1.5e-38

100

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Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES

XP_008463015.1 PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo]

2.9e-37

97.4

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Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK PPKKWLCCIQSPTAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES

XP_022139562.1 RPM1-interacting protein 4 [Momordica charantia]

1.1e-33

90.91

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Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR   DP+K PPKKWLCCIQSP AES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES

XP_022936748.1 uncharacterized protein LOC111443250 [Cucurbita moschata]

2.3e-34

92.21

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Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR+  DPAK PPKKWLCCIQSP AES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES

XP_038897827.1 protein NOI4 [Benincasa hispida]

2.1e-35

94.81

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Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR A DPAK PPKKWLCCIQSP AES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CI91 RPM1-interacting protein 4-like isoform X2

1.4e-37

97.4

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Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK PPKKWLCCIQSPTAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES

A0A6J1CEA3 RPM1-interacting protein 4

5.5e-34

90.91

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Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR   DP+K PPKKWLCCIQSP AES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES

A0A6J1FE40 uncharacterized protein LOC111443250

1.1e-34

92.21

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Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR+  DPAK PPKKWLCCIQSP AES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES

A0A6J1ID15 uncharacterized protein LOC111474733 isoform X2

1.1e-34

92.21

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Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR+  DPAK PPKKWLCCIQSP AES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES

A0A6J1J2H2 RPM1-interacting protein 4-like

3.5e-33

89.61

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Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES
        M DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR   +PAK PPKKWLCCIQSP AES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES

SwissProt top hits

e value

%identity

Alignment

O22633 Protein NOI4

1.3e-27

73.42

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Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAKTPPKKWLCCIQSPTAES
        M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K  PKKWLCC+Q+P  +S
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAKTPPKKWLCCIQSPTAES

Q8GYN5 RPM1-interacting protein 4

1.6e-06

35.82

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Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCC
        +K   +PKFG+WD N+P+SA+G+T IFNK R+E+ +G       +   H       ++ P     CC
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCC

Arabidopsis top hits

e value

%identity

Alignment

AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein

6.6e-24

68.06

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Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQS
        M DKGRPLPKFGEWDVNDP+SAEGFTVIFNKAR+EKK GGK DSPGK +       +  + P KKW CCI++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQS

AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein

6.2e-14

57.81

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Query:  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCC
        RPLPKFGEWDVNDP SAEGFTVIF KARD+KKT    ++ G+  +  R+       P KK  CC
Subjt:  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCC

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein

4.7e-22

64.94

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Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAKTPPKKWLCCIQSPTA
        M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K  P K +  + + ++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAKTPPKKWLCCIQSPTA

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein

3.1e-21

65.33

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Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAKTPPKKWLCCIQSPTA
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K  P K +  + + ++
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAKTPPKKWLCCIQSPTA

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein

5.8e-28

74.03

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Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAKTPPKKWLCCIQSPTAES
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K  PKKWLCC+Q+P  +S
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAKTPPKKWLCCIQSPTAES

Sequences

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CDS sequence

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ATGACGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCGGCTGAGGGTTTCACTGTGATTTTCAACAAAGCTAGAGATGAGAAGAA
AACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGAATGCACCAGATCCTGCCAAGACACCTCCTAAGAAATGGCTTTGCTGTATTCAAAGTCCCA
CTGCTGAATCTTAA

mRNA sequence

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ATAATTTCTTAAGAGGATTTTGGTATCCAATAAGCCCACATTTAGCCCATTTTACAAAAGTCGTCTTTCTTTCTCTCTTTCAATCTCCCACTCTTATTTTTCTCTCATTT
CATTCATTTGAAATTCCATTTTTTTTTTCCTCCGAAACCTTCTCTCTCTAGAATTCATGACGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGAT
CCGACATCGGCTGAGGGTTTCACTGTGATTTTCAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGAATGC
ACCAGATCCTGCCAAGACACCTCCTAAGAAATGGCTTTGCTGTATTCAAAGTCCCACTGCTGAATCTTAAGAAGGTTCGTTTAGAAGCTACAGTTGAAAAACTTCATATT
ATTCTGTAATTGTGCCTGCTGTTGGCTTCTCAAATACAGTGAACTTTTCATGGAGCCTTGATGGTCCTGCTAAATTTTATGCAATTTCATGTAAATCTGAGTGTTGTCTT
GTTGTTGTGGAGGAAAAAAAAAGTAAAGAAGAACATGTATTGTATTTATATTATTGATATGGTGGTTTTTTATTAGGGGATAAAGTTGCTATTCTGTCTTTGCCTTTGGT
GTGTGAGCTGTAAAGCTTTGCACTGGACATCATGTATAATTGTGGCTGGTATAATTAATGTAATACAACTTTTGCTTTTCTTTCAAACATACCCTTTTCCCATAATACTA
AATATTTATTTGACAAAGAAGATTTTAATCTACAAGACCCACCA

Protein sequence

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MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPKKWLCCIQSPTAES

CSPI07G08380 (gene) of Cucumber (PI 183967) v1 genome