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CSPI07G08620 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G08620
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Genome locationChr7:6446704..6447250
RNA-Seq ExpressionCSPI07G08620
SyntenyCSPI07G08620
Gene Ontology termsGO:0005622 - intracellular (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H
IPR018086 - NADH:ubiquinone oxidoreductase, subunit 1, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KVH87822.1 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H, partial [Cynara cardunculus var. scolymus]2.0e-1156.96Show/hide
Query:  MYGSVIAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL
        MYGSVI M TVI ST+DIVEAQSKY                       ECERLPFDLPEA+EELV GYQTEYS  ++ L
Subjt:  MYGSVIAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL

RZC52571.1 hypothetical protein C5167_021002 [Papaver somniferum]1.9e-0938.69Show/hide
Query:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYS--------------------------------
        I +   +SSTVDIVEAQSKY                       ECERLPFDLPEAEEELVAGYQTEYS                                
Subjt:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYS--------------------------------

Query:  -----------------ATRWTLPRLRIDQLGN-SWK
                          TRWTLPR+R+DQL N  WK
Subjt:  -----------------ATRWTLPRLRIDQLGN-SWK

RZC63930.1 hypothetical protein C5167_025677 [Papaver somniferum]1.9e-0938.69Show/hide
Query:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYS--------------------------------
        I +   +SSTVDIVEAQSKY                       ECERLPFDLPEAEEELVAGYQTEYS                                
Subjt:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYS--------------------------------

Query:  -----------------ATRWTLPRLRIDQLGN-SWK
                          TRWTLPR+R+DQL N  WK
Subjt:  -----------------ATRWTLPRLRIDQLGN-SWK

THU42127.1 hypothetical protein C4D60_Mb00t13160 [Musa balbisiana]2.3e-1061.11Show/hide
Query:  MRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL
        M TVISSTVDIVEAQSKY                       ECERLPFDLPEAEEELVAGYQTEYS  R+ L
Subjt:  MRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL

THU42787.1 hypothetical protein C4D60_Mb00t17950 [Musa balbisiana]2.3e-1061.11Show/hide
Query:  MRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL
        M TVISSTVDIVEAQSKY                       ECERLPFDLPEAEEELVAGYQTEYS  R+ L
Subjt:  MRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL

TrEMBL top hitse value%identityAlignment
A0A124SAL1 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H (Fragment)9.9e-1256.96Show/hide
Query:  MYGSVIAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL
        MYGSVI M TVI ST+DIVEAQSKY                       ECERLPFDLPEA+EELV GYQTEYS  ++ L
Subjt:  MYGSVIAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL

A0A4S8I4K4 Uncharacterized protein1.1e-1061.11Show/hide
Query:  MRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL
        M TVISSTVDIVEAQSKY                       ECERLPFDLPEAEEELVAGYQTEYS  R+ L
Subjt:  MRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL

A0A4S8I551 Uncharacterized protein1.1e-1061.11Show/hide
Query:  MRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL
        M TVISSTVDIVEAQSKY                       ECERLPFDLPEAEEELVAGYQTEYS  R+ L
Subjt:  MRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL

A0A4Y7IXU2 Uncharacterized protein9.3e-1038.69Show/hide
Query:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYS--------------------------------
        I +   +SSTVDIVEAQSKY                       ECERLPFDLPEAEEELVAGYQTEYS                                
Subjt:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYS--------------------------------

Query:  -----------------ATRWTLPRLRIDQLGN-SWK
                          TRWTLPR+R+DQL N  WK
Subjt:  -----------------ATRWTLPRLRIDQLGN-SWK

A0A4Y7JV54 Uncharacterized protein9.3e-1038.69Show/hide
Query:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYS--------------------------------
        I +   +SSTVDIVEAQSKY                       ECERLPFDLPEAEEELVAGYQTEYS                                
Subjt:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYS--------------------------------

Query:  -----------------ATRWTLPRLRIDQLGN-SWK
                          TRWTLPR+R+DQL N  WK
Subjt:  -----------------ATRWTLPRLRIDQLGN-SWK

SwissProt top hitse value%identityAlignment
A1E9X9 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic4.7e-1154.05Show/hide
Query:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL
        I++ +  SSTVDIVEAQSKY                       ECERLPFDLPEAEEELVAGYQTEYS  ++ L
Subjt:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL

A1EA64 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic4.7e-1154.05Show/hide
Query:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL
        I++ +  SSTVDIVEAQSKY                       ECERLPFDLPEAEEELVAGYQTEYS  ++ L
Subjt:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL

Q3V4X9 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic6.2e-1154.05Show/hide
Query:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL
        I++ +  SSTVDIVEAQSKY                       ECERLPFDLPEAEEELVAGYQTEYS  ++ L
Subjt:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL

Q7YJS9 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic6.2e-1154.05Show/hide
Query:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL
        I++ +  SSTVDIVEAQSKY                       ECERLPFDLPEAEEELVAGYQTEYS  ++ L
Subjt:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL

Q8S8U5 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic6.2e-1154.05Show/hide
Query:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL
        I++ +  SSTVDIVEAQSKY                       ECERLPFDLPEAEEELVAGYQTEYS  ++ L
Subjt:  IAMRTVISSTVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL

Arabidopsis top hitse value%identityAlignment
ATCG01100.1 NADH dehydrogenase family protein1.7e-1156.06Show/hide
Query:  STVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL
        STVDIVEAQSKY                       ECERLPFDLPEAEEEL+AGYQTEYS  ++ L
Subjt:  STVDIVEAQSKY-----------------------ECERLPFDLPEAEEELVAGYQTEYSATRWTL

ATMG00516.1 NADH dehydrogenase 1C9.8e-0469.23Show/hide
Query:  ECERLPFDLPEAEEELVAGYQTEYSA
        E  R PFDLPEAE E VAGY  EYS+
Subjt:  ECERLPFDLPEAEEELVAGYQTEYSA

ATMG01120.1 NADH dehydrogenase 1B9.8e-0469.23Show/hide
Query:  ECERLPFDLPEAEEELVAGYQTEYSA
        E  R PFDLPEAE E VAGY  EYS+
Subjt:  ECERLPFDLPEAEEELVAGYQTEYSA

ATMG01275.1 NADH dehydrogenase 1A9.8e-0469.23Show/hide
Query:  ECERLPFDLPEAEEELVAGYQTEYSA
        E  R PFDLPEAE E VAGY  EYS+
Subjt:  ECERLPFDLPEAEEELVAGYQTEYSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGGTTCTGTAATAGCGATGAGAACAGTGATTTCGAGTACCGTTGATATAGTTGAGGCTCAATCAAAATATGAATGCGAGAGATTACCTTTTGATTTACCAGAAGC
AGAAGAAGAATTAGTAGCGGGTTATCAAACTGAGTATTCGGCAACAAGATGGACTTTACCCCGACTAAGAATAGATCAACTCGGCAATTCATGGAAAGATGAATCGAGGA
AAAACTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTACGGTTCTGTAATAGCGATGAGAACAGTGATTTCGAGTACCGTTGATATAGTTGAGGCTCAATCAAAATATGAATGCGAGAGATTACCTTTTGATTTACCAGAAGC
AGAAGAAGAATTAGTAGCGGGTTATCAAACTGAGTATTCGGCAACAAGATGGACTTTACCCCGACTAAGAATAGATCAACTCGGCAATTCATGGAAAGATGAATCGAGGA
AAAACTTATGA
Protein sequenceShow/hide protein sequence
MYGSVIAMRTVISSTVDIVEAQSKYECERLPFDLPEAEEELVAGYQTEYSATRWTLPRLRIDQLGNSWKDESRKNL