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CSPI07G08700 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G08700
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 297 family
Genome locationChr7:6542536..6543183
RNA-Seq ExpressionCSPI07G08700
SyntenyCSPI07G08700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042324.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa]9.8e-1965.91Show/hide
Query:  ENDVTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALV
        E D  + S  IF   DDV  S+ HVSL A DTLESL+ LE+H  FNE++DQATLEHVE E AKN PSDDDLSIFL FVTS+NDE+ LV
Subjt:  ENDVTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALV

KAA0047865.1 hypothetical protein E6C27_scaffold133G001340 [Cucumis melo var. makuwa]1.3e-1863.95Show/hide
Query:  FNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALVIMLKHMNNM
        FN   DV  S+DHVSL A DTLESLETLE+H  F+E++DQATL++V+ + AKN PSD+DLSIFL FVTS+NDEH LV  L    NM
Subjt:  FNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALVIMLKHMNNM

KAA0062405.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa]1.5e-1966.25Show/hide
Query:  RKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALV
        + +F   DDV  S+DHVSL A DTLESLETLE+H  FNE++DQATLE+V+ E +KN PSDDDLSIFL FV S+ND H LV
Subjt:  RKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALV

KAA0066992.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]2.3e-2035.86Show/hide
Query:  KLNEQTLSPTRAVNNDLETMKASISEIENKLDQLATNIHETEENDELFA---HAYENDVTLESRKIFNDKDDV---------------------------
        KL+EQT++ T A+ ND+ETMKASISE+  KL+QLAT + + E   +L A   HA  + +TL S K  N  DDV                           
Subjt:  KLNEQTLSPTRAVNNDLETMKASISEIENKLDQLATNIHETEENDELFA---HAYENDVTLESRKIFNDKDDV---------------------------

Query:  ----------------NP-----------------------------------------------------------------SSDHVSLSAFDTLESLE
                        NP                                                                 S+DHVSL A DTLESLE
Subjt:  ----------------NP-----------------------------------------------------------------SSDHVSLSAFDTLESLE

Query:  TLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALV
         LE+H NFNE++DQATLE+VE E AKN PSDDDLSIFL FV S+NDEH  V
Subjt:  TLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALV

KAE8645971.1 hypothetical protein Csa_015450 [Cucumis sativus]1.3e-111100Show/hide
Query:  MGGYNAHNSGYTSSPSSPSQGTYLEELISGIAYSLDSFETDFEKNLAKLSEYTVSLTGSMRNDLAKLNEQTLSPTRAVNNDLETMKASISEIENKLDQLA
        MGGYNAHNSGYTSSPSSPSQGTYLEELISGIAYSLDSFETDFEKNLAKLSEYTVSLTGSMRNDLAKLNEQTLSPTRAVNNDLETMKASISEIENKLDQLA
Subjt:  MGGYNAHNSGYTSSPSSPSQGTYLEELISGIAYSLDSFETDFEKNLAKLSEYTVSLTGSMRNDLAKLNEQTLSPTRAVNNDLETMKASISEIENKLDQLA

Query:  TNIHETEENDELFAHAYENDVTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSIND
        TNIHETEENDELFAHAYENDVTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSIND
Subjt:  TNIHETEENDELFAHAYENDVTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSIND

Query:  EHALVIMLKHMNNML
        EHALVIMLKHMNNML
Subjt:  EHALVIMLKHMNNML

TrEMBL top hitse value%identityAlignment
A0A0A0K703 Uncharacterized protein6.2e-112100Show/hide
Query:  MGGYNAHNSGYTSSPSSPSQGTYLEELISGIAYSLDSFETDFEKNLAKLSEYTVSLTGSMRNDLAKLNEQTLSPTRAVNNDLETMKASISEIENKLDQLA
        MGGYNAHNSGYTSSPSSPSQGTYLEELISGIAYSLDSFETDFEKNLAKLSEYTVSLTGSMRNDLAKLNEQTLSPTRAVNNDLETMKASISEIENKLDQLA
Subjt:  MGGYNAHNSGYTSSPSSPSQGTYLEELISGIAYSLDSFETDFEKNLAKLSEYTVSLTGSMRNDLAKLNEQTLSPTRAVNNDLETMKASISEIENKLDQLA

Query:  TNIHETEENDELFAHAYENDVTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSIND
        TNIHETEENDELFAHAYENDVTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSIND
Subjt:  TNIHETEENDELFAHAYENDVTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSIND

Query:  EHALVIMLKHMNNML
        EHALVIMLKHMNNML
Subjt:  EHALVIMLKHMNNML

A0A0A0KCG4 Uncharacterized protein9.8e-3371.07Show/hide
Query:  MKASISEIENKLDQLATNIHETEENDELFAHAYENDVTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPS
        MKAS  EI NKLDQL T+I E E NDEL +HAY NDVTLESRKIFNDKDDVNPSSDHVSLSAF TLESLETLEKHGNFNEI                   
Subjt:  MKASISEIENKLDQLATNIHETEENDELFAHAYENDVTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPS

Query:  DDDLSIFLGFVTSINDEHALV
         DDLSIFL F+TSIN+EHALV
Subjt:  DDDLSIFLGFVTSINDEHALV

A0A5D3BDS0 Transposon Ty3-I Gag-Pol polyprotein1.1e-2035.86Show/hide
Query:  KLNEQTLSPTRAVNNDLETMKASISEIENKLDQLATNIHETEENDELFA---HAYENDVTLESRKIFNDKDDV---------------------------
        KL+EQT++ T A+ ND+ETMKASISE+  KL+QLAT + + E   +L A   HA  + +TL S K  N  DDV                           
Subjt:  KLNEQTLSPTRAVNNDLETMKASISEIENKLDQLATNIHETEENDELFA---HAYENDVTLESRKIFNDKDDV---------------------------

Query:  ----------------NP-----------------------------------------------------------------SSDHVSLSAFDTLESLE
                        NP                                                                 S+DHVSL A DTLESLE
Subjt:  ----------------NP-----------------------------------------------------------------SSDHVSLSAFDTLESLE

Query:  TLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALV
         LE+H NFNE++DQATLE+VE E AKN PSDDDLSIFL FV S+NDEH  V
Subjt:  TLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALV

A0A5D3CW21 Retrovirus-related Pol polyprotein from transposon 297 family4.7e-1965.91Show/hide
Query:  ENDVTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALV
        E D  + S  IF   DDV  S+ HVSL A DTLESL+ LE+H  FNE++DQATLEHVE E AKN PSDDDLSIFL FVTS+NDE+ LV
Subjt:  ENDVTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALV

A0A5D3DS97 Retrovirus-related Pol polyprotein from transposon 297 family7.3e-2066.25Show/hide
Query:  RKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALV
        + +F   DDV  S+DHVSL A DTLESLETLE+H  FNE++DQATLE+V+ E +KN PSDDDLSIFL FV S+ND H LV
Subjt:  RKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGTTACAACGCTCACAACTCTGGATACACTTCTTCTCCCTCATCACCATCACAAGGTACATATTTAGAAGAATTAATCTCAGGAATTGCTTATAGCTTAGATAG
TTTTGAAACTGATTTTGAGAAGAATTTAGCTAAGTTGAGTGAATACACTGTTAGTTTAACTGGAAGCATGAGAAATGACTTAGCTAAGTTGAATGAACAAACCCTTAGTC
CAACTAGAGCCGTGAATAATGACTTAGAAACCATGAAAGCATCCATATCTGAGATTGAAAATAAGCTCGATCAATTAGCAACAAACATTCATGAAACAGAAGAAAATGAT
GAACTTTTTGCCCATGCATATGAGAACGATGTTACTTTAGAAAGTAGAAAAATTTTCAATGATAAAGATGACGTAAACCCTTCTAGTGATCATGTTTCATTAAGTGCATT
TGATACCTTAGAATCATTAGAGACACTAGAAAAGCATGGTAATTTCAATGAGATTGTTGATCAAGCAACTTTAGAACATGTTGAAATTGAAGCTGCTAAGAACGACCCTA
GTGACGATGATCTCTCTATCTTCCTTGGCTTTGTTACTAGTATAAATGATGAGCATGCTTTGGTGATAATGTTGAAACACATGAACAACATGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGTTACAACGCTCACAACTCTGGATACACTTCTTCTCCCTCATCACCATCACAAGGTACATATTTAGAAGAATTAATCTCAGGAATTGCTTATAGCTTAGATAG
TTTTGAAACTGATTTTGAGAAGAATTTAGCTAAGTTGAGTGAATACACTGTTAGTTTAACTGGAAGCATGAGAAATGACTTAGCTAAGTTGAATGAACAAACCCTTAGTC
CAACTAGAGCCGTGAATAATGACTTAGAAACCATGAAAGCATCCATATCTGAGATTGAAAATAAGCTCGATCAATTAGCAACAAACATTCATGAAACAGAAGAAAATGAT
GAACTTTTTGCCCATGCATATGAGAACGATGTTACTTTAGAAAGTAGAAAAATTTTCAATGATAAAGATGACGTAAACCCTTCTAGTGATCATGTTTCATTAAGTGCATT
TGATACCTTAGAATCATTAGAGACACTAGAAAAGCATGGTAATTTCAATGAGATTGTTGATCAAGCAACTTTAGAACATGTTGAAATTGAAGCTGCTAAGAACGACCCTA
GTGACGATGATCTCTCTATCTTCCTTGGCTTTGTTACTAGTATAAATGATGAGCATGCTTTGGTGATAATGTTGAAACACATGAACAACATGCTTTAG
Protein sequenceShow/hide protein sequence
MGGYNAHNSGYTSSPSSPSQGTYLEELISGIAYSLDSFETDFEKNLAKLSEYTVSLTGSMRNDLAKLNEQTLSPTRAVNNDLETMKASISEIENKLDQLATNIHETEEND
ELFAHAYENDVTLESRKIFNDKDDVNPSSDHVSLSAFDTLESLETLEKHGNFNEIVDQATLEHVEIEAAKNDPSDDDLSIFLGFVTSINDEHALVIMLKHMNNML