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CSPI07G08740 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G08740
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationChr7:6579989..6580243
RNA-Seq ExpressionCSPI07G08740
SyntenyCSPI07G08740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]7.5e-1570.77Show/hide
Query:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILK
        ME+YL  MKTN +NLGQ GS VP  AL+SQVLLGLDE YNLVIV+IQGK + SW DMQS+LLI +
Subjt:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILK

KAA0057475.1 uncharacterized protein E6C27_scaffold280G003560 [Cucumis melo var. makuwa]2.0e-1571.21Show/hide
Query:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILKN
        MEDYL+ MK NA+NLGQAGS VPH  L+SQVLLGLDE YN V  +IQGK + SW DMQSELLI +N
Subjt:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILKN

KGN65684.1 hypothetical protein Csa_019689 [Cucumis sativus]4.4e-1572.31Show/hide
Query:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILK
        MEDYL+ MKTNA+NLGQA S +P  AL+SQVLLGLDE YN VIV+IQGK E SW DMQS+LLI +
Subjt:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILK

XP_031739914.1 uncharacterized protein LOC116403326 isoform X1 [Cucumis sativus]3.0e-1676.92Show/hide
Query:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILK
        MEDYL  MKTN +NL QAGSLVP  AL+SQVLLGLDE YNLVIV+IQGKL  SW DMQSELLI +
Subjt:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILK

XP_031739915.1 uncharacterized protein LOC116403326 isoform X2 [Cucumis sativus]3.0e-1676.92Show/hide
Query:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILK
        MEDYL  MKTN +NL QAGSLVP  AL+SQVLLGLDE YNLVIV+IQGKL  SW DMQSELLI +
Subjt:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILK

TrEMBL top hitse value%identityAlignment
A0A0A0LXB7 Uncharacterized protein2.1e-1572.31Show/hide
Query:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILK
        MEDYL+ MKTNA+NLGQA S +P  AL+SQVLLGLDE YN VIV+IQGK E SW DMQS+LLI +
Subjt:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILK

A0A5A7SIT7 Uncharacterized protein3.6e-1570.77Show/hide
Query:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILK
        ME+YL  MKTN +NLGQ GS VP  AL+SQVLLGLDE YNLVIV+IQGK + SW DMQS+LLI +
Subjt:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILK

A0A5D3C373 Retrovirus-related Pol polyprotein from transposon TNT 1-942.6e-1370.49Show/hide
Query:  EDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELL
        EDYL+ MKTN++ LGQAGS VP  A +SQ LLGLDE YN VI +IQGK E SW DMQSELL
Subjt:  EDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELL

A0A5D3E3L7 Uncharacterized protein9.6e-1671.21Show/hide
Query:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILKN
        MEDYL+ MK NA+NLGQAGS VPH  L+SQVLLGLDE YN V  +IQGK + SW DMQSELLI +N
Subjt:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILKN

A0A6J1D5J0 uncharacterized protein LOC1110175011.2e-1061.67Show/hide
Query:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSE
        M D+L+ MK++A+NLGQAGS VP  +L+SQVLLGLDE YN V+  IQGK   SW +MQ+E
Subjt:  MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATTATTTGCAGAATATGAAAACTAACGCGAACAACCTTGGTCAAGCCGGTAGCCTAGTACCTCATCATGCCCTTGTTTCACAGGTATTATTGGGATTAGATGA
AGCGTATAACTTGGTCATTGTTCTTATCCAAGGAAAGTTGGAGACATCTTGGCACGACATGCAATCTGAGCTTCTAATATTGAAAAACTGTTGGATCACCAAAACACTCA
CAATATTACTGGTTATTAATTCCAAACGCTACTGT
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATTATTTGCAGAATATGAAAACTAACGCGAACAACCTTGGTCAAGCCGGTAGCCTAGTACCTCATCATGCCCTTGTTTCACAGGTATTATTGGGATTAGATGA
AGCGTATAACTTGGTCATTGTTCTTATCCAAGGAAAGTTGGAGACATCTTGGCACGACATGCAATCTGAGCTTCTAATATTGAAAAACTGTTGGATCACCAAAACACTCA
CAATATTACTGGTTATTAATTCCAAACGCTACTGT
Protein sequenceShow/hide protein sequence
MEDYLQNMKTNANNLGQAGSLVPHHALVSQVLLGLDEAYNLVIVLIQGKLETSWHDMQSELLILKNCWITKTLTILLVINSKRYC