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CSPI07G09020 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G09020
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranscriptional adapter
Genome locationChr7:6855339..6856849
RNA-Seq ExpressionCSPI07G09020
SyntenyCSPI07G09020
Gene Ontology termsGO:0006338 - chromatin remodeling (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0035066 - positive regulation of histone acetylation (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000433 - Zinc finger, ZZ-type
IPR034318 - Transcriptional adapter ADA2, plants
IPR041983 - ADA2-like, zinc finger, ZZ-type
IPR043145 - Zinc finger, ZZ-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK23071.1 transcriptional adapter ADA2-like isoform X2 [Cucumis melo var. makuwa]5.8e-4798.95Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVM
        MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQE GDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVM
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVM

XP_004139846.1 transcriptional adapter ADA2a isoform X2 [Cucumis sativus]6.2e-4998.99Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLS
        MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD LS
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLS

XP_011658944.1 transcriptional adapter ADA2a isoform X1 [Cucumis sativus]1.5e-4798Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT-GQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLS
        MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT GQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD LS
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT-GQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLS

XP_016900505.1 PREDICTED: transcriptional adapter ADA2-like isoform X2 [Cucumis melo]3.1e-4897.98Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLS
        MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQE GDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD LS
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLS

XP_031744982.1 transcriptional adapter ADA2a isoform X3 [Cucumis sativus]1.5e-4798Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT-GQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLS
        MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT GQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD LS
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT-GQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLS

TrEMBL top hitse value%identityAlignment
A0A0A0K8H2 Transcriptional adapter3.0e-4998.99Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLS
        MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD LS
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLS

A0A1S3BI16 Transcriptional adapter3.7e-4797Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT-GQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLS
        MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT GQE GDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD LS
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT-GQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLS

A0A1S4DXR8 Transcriptional adapter1.5e-4897.98Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLS
        MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQE GDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD LS
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLS

A0A5A7U850 Transcriptional adapter ADA2-like isoform X13.7e-4797Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT-GQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLS
        MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT GQE GDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD LS
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT-GQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLS

A0A5D3DHD5 Transcriptional adapter ADA2-like isoform X22.8e-4798.95Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVM
        MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQE GDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVM
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVM

SwissProt top hitse value%identityAlignment
Q59WH0 Transcriptional adapter 27.0e-1142.86Show/hide
Query:  DGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD
        D +  L+HC+ C+ D + RIRI+C  C D+DLCV CF+ G     HK  H Y++++
Subjt:  DGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD

Q75LL6 Transcriptional adapter ADA25.7e-2961.17Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT----GQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD
        MGRSR V    D+++N    +R+  SS +A +  +    G   G GK ALYHCNYCNKD+SG+IRIKC  CPDFDLCVECFSVGAE+ PH+SNHPYRVMD
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT----GQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD

Query:  LLS
         LS
Subjt:  LLS

Q9ATB4 Transcriptional adapter ADA2b1.4e-1951.96Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPSST---EATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDL
        MGRSR  +    ED  Q   K+K  ++    E+T+   G E G GK   Y+C+YC KD++G+IRIKC  CPDFDLC+EC SVGAE+ PHK +HPYRVM  
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPSST---EATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDL

Query:  LS
        L+
Subjt:  LS

Q9P7J7 Transcriptional adapter 22.8e-1252Show/hide
Query:  YHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD
        YHCN C +D++  I I+CV C DFDLC+ CF+ GA L  H  +HPYR+++
Subjt:  YHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD

Q9SFD5 Transcriptional adapter ADA2a9.1e-2757.8Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPS---STEATNPATGQELG-DGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD
        MGRS++ SRP +ED N  KSKRK+ S      A + +TG E G + K  LY CNYC+KDLSG +R KC  C DFDLCVECFSVG EL  HK++HPYRVMD
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPS---STEATNPATGQELG-DGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD

Query:  LLSIESTVS
         LS     S
Subjt:  LLSIESTVS

Arabidopsis top hitse value%identityAlignment
AT3G07740.1 homolog of yeast ADA2 2A6.5e-2857.8Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPS---STEATNPATGQELG-DGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD
        MGRS++ SRP +ED N  KSKRK+ S      A + +TG E G + K  LY CNYC+KDLSG +R KC  C DFDLCVECFSVG EL  HK++HPYRVMD
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPS---STEATNPATGQELG-DGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMD

Query:  LLSIESTVS
         LS     S
Subjt:  LLSIESTVS

AT3G07740.4 homolog of yeast ADA2 2A2.1e-2659.6Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPS---STEATNPATGQELG-DGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVM
        MGRS++ SRP +ED N  KSKRK+ S      A + +TG E G + K  LY CNYC+KDLSG +R KC  C DFDLCVECFSVG EL  HK++HPYRVM
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPS---STEATNPATGQELG-DGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVM

AT4G16420.1 homolog of yeast ADA2 2B1.0e-2051.96Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPSST---EATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDL
        MGRSR  +    ED  Q   K+K  ++    E+T+   G E G GK   Y+C+YC KD++G+IRIKC  CPDFDLC+EC SVGAE+ PHK +HPYRVM  
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPSST---EATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDL

Query:  LS
        L+
Subjt:  LS

AT4G16420.2 homolog of yeast ADA2 2B1.0e-2051.96Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPSST---EATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDL
        MGRSR  +    ED  Q   K+K  ++    E+T+   G E G GK   Y+C+YC KD++G+IRIKC  CPDFDLC+EC SVGAE+ PHK +HPYRVM  
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPSST---EATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDL

Query:  LS
        L+
Subjt:  LS

AT4G16420.3 homolog of yeast ADA2 2B1.0e-2051.96Show/hide
Query:  MGRSRMVSRPEDEDSNQSKSKRKRPSST---EATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDL
        MGRSR  +    ED  Q   K+K  ++    E+T+   G E G GK   Y+C+YC KD++G+IRIKC  CPDFDLC+EC SVGAE+ PHK +HPYRVM  
Subjt:  MGRSRMVSRPEDEDSNQSKSKRKRPSST---EATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDL

Query:  LS
        L+
Subjt:  LS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGTTCTCGGATGGTGTCTCGTCCGGAAGATGAGGACTCAAATCAGAGTAAATCCAAGAGGAAAAGGCCTAGTTCCACAGAGGCTACGAATCCAGCTACAGGTCA
GGAATTGGGAGATGGAAAAGCAGCCTTATACCATTGTAATTACTGCAACAAAGATTTATCTGGAAGGATTCGCATAAAGTGTGTGGCATGTCCAGATTTTGACCTTTGTG
TGGAGTGCTTTTCTGTTGGAGCAGAGCTTAGACCTCACAAAAGCAACCATCCTTATAGGGTTATGGATCTGCTATCTATTGAATCTACAGTGAGTGTTCAATCTTCTTCT
ATGCGTGCATAG
mRNA sequenceShow/hide mRNA sequence
CGAACTCCGGCGACACTCGAATTCTGGCTGCACTAGGCGAATCCTGAACAAAGGTCAAAACAATTTTGTGCTCTCGTTTTCTTTGTTACTGATATTTGGTTATTCGGATC
GATGGGTCGTTCTCGGATGGTGTCTCGTCCGGAAGATGAGGACTCAAATCAGAGTAAATCCAAGAGGAAAAGGCCTAGTTCCACAGAGGCTACGAATCCAGCTACAGGTC
AGGAATTGGGAGATGGAAAAGCAGCCTTATACCATTGTAATTACTGCAACAAAGATTTATCTGGAAGGATTCGCATAAAGTGTGTGGCATGTCCAGATTTTGACCTTTGT
GTGGAGTGCTTTTCTGTTGGAGCAGAGCTTAGACCTCACAAAAGCAACCATCCTTATAGGGTTATGGATCTGCTATCTATTGAATCTACAGTGAGTGTTCAATCTTCTTC
TATGCGTGCATAG
Protein sequenceShow/hide protein sequence
MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDLLSIESTVSVQSSS
MRA