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CSPI07G09150 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G09150
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr7:6990611..6991059
RNA-Seq ExpressionCSPI07G09150
SyntenyCSPI07G09150
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032304.1 Gag [Cucumis melo var. makuwa]5.9e-1477.78Show/hide
Query:  KPLVDLYQASLKEKGKNVEVSFACQDDVYDPFNITHLDVSDFFEFPEEKIDVKE
        K LV LYQASL+EKGKNVEV+FA QDDV+DP N+THLDV+DFFE PEEK DV E
Subjt:  KPLVDLYQASLKEKGKNVEVSFACQDDVYDPFNITHLDVSDFFEFPEEKIDVKE

PIN26939.1 hypothetical protein CDL12_00296 [Handroanthus impetiginosus]2.0e-1445Show/hide
Query:  MKNHDSRPTRATPLPEANYVFSNNNGRGRGCGHGRDCAKGRKIILFVF---------------KPLVDLYQASLKEKGKNVEVSFACQDDVYDPFN----
        MKN +SRPT ++P PE N +  +N GRGRG  HGR   +GR I    F               K LV+LYQASLK+K ++VE +F    + +D  N    
Subjt:  MKNHDSRPTRATPLPEANYVFSNNNGRGRGCGHGRDCAKGRKIILFVF---------------KPLVDLYQASLKEKGKNVEVSFACQDDVYDPFN----

Query:  --ITHLDVSDFFEFPEEKID
          ITHLDV++FFE PE+KID
Subjt:  --ITHLDVSDFFEFPEEKID

TMW80854.1 hypothetical protein EJD97_014359 [Solanum chilense]3.5e-1445.95Show/hide
Query:  MKNHDSRPTRATPLPEANYVFSNN------------NGRGRGCGHGRDCAKGRKIILFVFKPLVDLYQASLKEKGKNVEVSFACQDDVYDPFNITHLDVS
        +KNH++RPT + PLPE N V++++             GRGRG G GRD  +GR       K LV+LYQ SLK+K KN+E +F  ++ V    +ITHLDV+
Subjt:  MKNHDSRPTRATPLPEANYVFSNN------------NGRGRGCGHGRDCAKGRKIILFVFKPLVDLYQASLKEKGKNVEVSFACQDDVYDPFNITHLDVS

Query:  DFFEFPEEKID
        DF   PE KID
Subjt:  DFFEFPEEKID

XP_022152405.1 uncharacterized protein LOC111020141 [Momordica charantia]1.8e-1540.94Show/hide
Query:  MKNHDSRPTRATPLPEANYVFSNNNGRGRGCGHGRDCAKGRKIILFV--------------------------------------------------FKP
        MKN +SRPT ATP  EAN V  NN GRGRG G GRD  +GR    F+                                                   K 
Subjt:  MKNHDSRPTRATPLPEANYVFSNNNGRGRGCGHGRDCAKGRKIILFV--------------------------------------------------FKP

Query:  LVDLYQASLKEKGKNVEVSFACQD-DVYDPFNITHLDVSDFFEFPEEKI
        LVDLYQASLKEKG NVE + A  D D++D  NIT LDV+DF E P E+I
Subjt:  LVDLYQASLKEKGKNVEVSFACQD-DVYDPFNITHLDVSDFFEFPEEKI

XP_027173983.1 double-strand break repair protein MRE11-like [Coffea eugenioides]2.6e-1444.26Show/hide
Query:  MKNHDSRPTRATPLPEANYVFSNNNGRGRGCG--------HGRDCAKGRKIILFV----------------FKPLVDLYQASLKEKGKNVEVSFACQDDV
        +KNH+SRPT A+P PEAN     N+GRGRG G         GR   +GR    FV                 + LVDLYQASLK+K K+VE +F  Q + 
Subjt:  MKNHDSRPTRATPLPEANYVFSNNNGRGRGCG--------HGRDCAKGRKIILFV----------------FKPLVDLYQASLKEKGKNVEVSFACQDDV

Query:  Y--DPFNITHLDVSDFFEFPEE
        Y  D  ++THLD++DFFE PE+
Subjt:  Y--DPFNITHLDVSDFFEFPEE

TrEMBL top hitse value%identityAlignment
A0A2G9IB18 CCHC-type domain-containing protein9.8e-1545Show/hide
Query:  MKNHDSRPTRATPLPEANYVFSNNNGRGRGCGHGRDCAKGRKIILFVF---------------KPLVDLYQASLKEKGKNVEVSFACQDDVYDPFN----
        MKN +SRPT ++P PE N +  +N GRGRG  HGR   +GR I    F               K LV+LYQASLK+K ++VE +F    + +D  N    
Subjt:  MKNHDSRPTRATPLPEANYVFSNNNGRGRGCGHGRDCAKGRKIILFVF---------------KPLVDLYQASLKEKGKNVEVSFACQDDVYDPFN----

Query:  --ITHLDVSDFFEFPEEKID
          ITHLDV++FFE PE+KID
Subjt:  --ITHLDVSDFFEFPEEKID

A0A5B6W611 Uncharacterized protein4.9e-1443.36Show/hide
Query:  MKNHDSRPTRATPLPEANYVFSNNN------------GRGRGCGHGRDCAKGR-----KIILFVFKPLVDLYQASLKEKGKNVEVSFACQD--DVYDPFN
        MKNH+SRPT +TPLP+AN +  N N            GRGRG GHG+ C + R            K LV+LYQ S K+KGK  E +F C++  D Y    
Subjt:  MKNHDSRPTRATPLPEANYVFSNNN------------GRGRGCGHGRDCAKGR-----KIILFVFKPLVDLYQASLKEKGKNVEVSFACQD--DVYDPFN

Query:  ITHLDVSDFFEFP
         THL+ +DFF  P
Subjt:  ITHLDVSDFFEFP

A0A5D3BHZ8 Gag2.9e-1477.78Show/hide
Query:  KPLVDLYQASLKEKGKNVEVSFACQDDVYDPFNITHLDVSDFFEFPEEKIDVKE
        K LV LYQASL+EKGKNVEV+FA QDDV+DP N+THLDV+DFFE PEEK DV E
Subjt:  KPLVDLYQASLKEKGKNVEVSFACQDDVYDPFNITHLDVSDFFEFPEEKIDVKE

A0A6J1DDU8 uncharacterized protein LOC1110201418.9e-1640.94Show/hide
Query:  MKNHDSRPTRATPLPEANYVFSNNNGRGRGCGHGRDCAKGRKIILFV--------------------------------------------------FKP
        MKN +SRPT ATP  EAN V  NN GRGRG G GRD  +GR    F+                                                   K 
Subjt:  MKNHDSRPTRATPLPEANYVFSNNNGRGRGCGHGRDCAKGRKIILFV--------------------------------------------------FKP

Query:  LVDLYQASLKEKGKNVEVSFACQD-DVYDPFNITHLDVSDFFEFPEEKI
        LVDLYQASLKEKG NVE + A  D D++D  NIT LDV+DF E P E+I
Subjt:  LVDLYQASLKEKGKNVEVSFACQD-DVYDPFNITHLDVSDFFEFPEEKI

A0A6N2AHF8 Uncharacterized protein1.7e-1445.95Show/hide
Query:  MKNHDSRPTRATPLPEANYVFSNN------------NGRGRGCGHGRDCAKGRKIILFVFKPLVDLYQASLKEKGKNVEVSFACQDDVYDPFNITHLDVS
        +KNH++RPT + PLPE N V++++             GRGRG G GRD  +GR       K LV+LYQ SLK+K KN+E +F  ++ V    +ITHLDV+
Subjt:  MKNHDSRPTRATPLPEANYVFSNN------------NGRGRGCGHGRDCAKGRKIILFVFKPLVDLYQASLKEKGKNVEVSFACQDDVYDPFNITHLDVS

Query:  DFFEFPEEKID
        DF   PE KID
Subjt:  DFFEFPEEKID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAACCATGACTCTCGACCAACTAGAGCAACACCACTCCCTGAAGCGAATTATGTATTTTCAAACAATAATGGTCGAGGTCGAGGTTGTGGTCATGGTCGTGACTG
TGCTAAAGGAAGAAAAATTATACTTTTCGTGTTCAAGCCCTTAGTCGACCTCTATCAAGCCTCATTGAAGGAAAAAGGAAAGAATGTGGAAGTAAGCTTTGCTTGTCAAG
ATGATGTCTATGACCCTTTCAATATAACACATTTGGATGTTTCTGACTTCTTTGAGTTTCCTGAAGAGAAAATTGATGTTAAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAACCATGACTCTCGACCAACTAGAGCAACACCACTCCCTGAAGCGAATTATGTATTTTCAAACAATAATGGTCGAGGTCGAGGTTGTGGTCATGGTCGTGACTG
TGCTAAAGGAAGAAAAATTATACTTTTCGTGTTCAAGCCCTTAGTCGACCTCTATCAAGCCTCATTGAAGGAAAAAGGAAAGAATGTGGAAGTAAGCTTTGCTTGTCAAG
ATGATGTCTATGACCCTTTCAATATAACACATTTGGATGTTTCTGACTTCTTTGAGTTTCCTGAAGAGAAAATTGATGTTAAGGAATAG
Protein sequenceShow/hide protein sequence
MKNHDSRPTRATPLPEANYVFSNNNGRGRGCGHGRDCAKGRKIILFVFKPLVDLYQASLKEKGKNVEVSFACQDDVYDPFNITHLDVSDFFEFPEEKIDVKE