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CSPI07G09200 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G09200
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReverse transcriptase
Genome locationChr7:7068712..7069362
RNA-Seq ExpressionCSPI07G09200
SyntenyCSPI07G09200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026036.1 uncharacterized protein E6C27_scaffold581G00210 [Cucumis melo var. makuwa]8.8e-3155.84Show/hide
Query:  KLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIK--------------SSLGDHDLHIERTLKSMANLEDYNVVL
        K   + GTD+VGKD  +L   KC S  TEDSQS+NDD + KRPK+ +KQSIDDE++PI+              S LGDH L IE T K M + E    VL
Subjt:  KLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIK--------------SSLGDHDLHIERTLKSMANLEDYNVVL

Query:  TYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLRR
        + SEN K PI AT  S  PLVIK SPQ+VEG K I AS+ISHFCADNLISDL+R
Subjt:  TYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLRR

KAA0033822.1 uncharacterized protein E6C27_scaffold1735G00180 [Cucumis melo var. makuwa]3.9e-3150.85Show/hide
Query:  DLWRKLREGQNDWWIIHLLLHALIKLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIK--------------SSL
        +L  K+REG   + +      A  K   + G D+V KD   L   K PS  TED  ++NDD +WKRPK+ +KQSIDDE+ PI+              SSL
Subjt:  DLWRKLREGQNDWWIIHLLLHALIKLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIK--------------SSL

Query:  GDHDLHIERTLKSMANLEDYNVVLTYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLR
        GDH L IE T K MA+ ED    L+ SENSKTPI AT  S  PLV K SPQQV GT+ I  S+ISHFCADNLISDLR
Subjt:  GDHDLHIERTLKSMANLEDYNVVLTYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLR

TYK22840.1 uncharacterized protein E5676_scaffold115G00220 [Cucumis melo var. makuwa]3.6e-3257.14Show/hide
Query:  KLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIK--------------SSLGDHDLHIERTLKSMANLEDYNVVL
        K   + GTD+VGKD  +L   KC S  TEDSQS+NDD + KRPK+ +KQSIDDE++PI+              SSLGDH L IE T K M + E    VL
Subjt:  KLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIK--------------SSLGDHDLHIERTLKSMANLEDYNVVL

Query:  TYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLRR
        + SENSK PI AT  S  PLVIK SPQ+VEG K I AS+ISHFCADNLISDL+R
Subjt:  TYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLRR

XP_031739998.1 uncharacterized protein LOC116403342 [Cucumis sativus]4.8e-4564.07Show/hide
Query:  EGQNDWWIIHLLLHALIKLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIKSSLGDHDLHIERTLKSM-------
        EG     + +L L    K  IK G D+VGKD+RL IA K PS+R EDSQSSNDD +WKRPKK NKQSIDDEESPI+SSLGDHDLHIE TL+SM       
Subjt:  EGQNDWWIIHLLLHALIKLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIKSSLGDHDLHIERTLKSM-------

Query:  ---ANLEDYNVVLTYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLRR
            NLED N+VL+Y+ NSK PI A I SA P VIKG PQ+VEGT+ I  S+ISHFCAD+LISDLRR
Subjt:  ---ANLEDYNVVLTYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLRR

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]3.2e-4153.73Show/hide
Query:  EGQNDWWIIHLLLHALIKLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIK------------------------
        EG     + +L L    K  IK G D+VGKD+RL IA K PS+R EDSQSSNDD +WKRPKK NKQSIDDEESPI+                        
Subjt:  EGQNDWWIIHLLLHALIKLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIK------------------------

Query:  --------------------SSLGDHDLHIERTLKSMANLEDYNVVLTYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLR
                            SSLGDHDLHIE TL+SM NLED NVVL+Y+ NSK PI A I SA P VIKG PQ+VEGT+ I  S+ISHFCAD+LISDLR
Subjt:  --------------------SSLGDHDLHIERTLKSMANLEDYNVVLTYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLR

Query:  R
        R
Subjt:  R

TrEMBL top hitse value%identityAlignment
A0A5A7SJR1 Uncharacterized protein4.2e-3155.84Show/hide
Query:  KLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIK--------------SSLGDHDLHIERTLKSMANLEDYNVVL
        K   + GTD+VGKD  +L   KC S  TEDSQS+NDD + KRPK+ +KQSIDDE++PI+              S LGDH L IE T K M + E    VL
Subjt:  KLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIK--------------SSLGDHDLHIERTLKSMANLEDYNVVL

Query:  TYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLRR
        + SEN K PI AT  S  PLVIK SPQ+VEG K I AS+ISHFCADNLISDL+R
Subjt:  TYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLRR

A0A5A7SRI5 Uncharacterized protein1.9e-3150.85Show/hide
Query:  DLWRKLREGQNDWWIIHLLLHALIKLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIK--------------SSL
        +L  K+REG   + +      A  K   + G D+V KD   L   K PS  TED  ++NDD +WKRPK+ +KQSIDDE+ PI+              SSL
Subjt:  DLWRKLREGQNDWWIIHLLLHALIKLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIK--------------SSL

Query:  GDHDLHIERTLKSMANLEDYNVVLTYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLR
        GDH L IE T K MA+ ED    L+ SENSKTPI AT  S  PLV K SPQQV GT+ I  S+ISHFCADNLISDLR
Subjt:  GDHDLHIERTLKSMANLEDYNVVLTYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLR

A0A5A7V0Y4 Uncharacterized protein1.2e-2856.64Show/hide
Query:  ALIKLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIKSSLGDHDLHIERTLKSMANLEDYNVVLTYSENSKTPIC
        A  K   +   ++V KD  +L   K PS  TEDS SSNDD +WKRPK+ +KQSIDDE+ PI+SSLGDH L IE T K MA+ E+    L+ SENSKTPI 
Subjt:  ALIKLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIKSSLGDHDLHIERTLKSMANLEDYNVVLTYSENSKTPIC

Query:  ATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLRR
         T  S  PLV K SPQ+V GT     + ISH CADNLISDLRR
Subjt:  ATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLRR

A0A5D3DCE4 Uncharacterized protein1.0e-2955.97Show/hide
Query:  RKLREGQNDWWIIHLLLHALIKLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIKSSLGDHDLHIERTLKSMANL
        RK+ EG     + +  L A  KL    GT+++GKD  +L   K PS+ T+DSQSSNDD + KR K+  KQSIDDE+ PI+SSLGD  L I+ T K MA+L
Subjt:  RKLREGQNDWWIIHLLLHALIKLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIKSSLGDHDLHIERTLKSMANL

Query:  EDYNVVLTYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDL
        E    V + SENSKT I  T  S  P VIKGSPQ+VEGTK I AS+IS FCADNLISDL
Subjt:  EDYNVVLTYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDL

A0A5D3DHK0 Uncharacterized protein1.7e-3257.14Show/hide
Query:  KLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIK--------------SSLGDHDLHIERTLKSMANLEDYNVVL
        K   + GTD+VGKD  +L   KC S  TEDSQS+NDD + KRPK+ +KQSIDDE++PI+              SSLGDH L IE T K M + E    VL
Subjt:  KLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIK--------------SSLGDHDLHIERTLKSMANLEDYNVVL

Query:  TYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLRR
        + SENSK PI AT  S  PLVIK SPQ+VEG K I AS+ISHFCADNLISDL+R
Subjt:  TYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTGAGGAACGACTTATGGAGAAAATTGAGGGAGGGACAAAATGATTGGTGGATAATTCATCTCCTTCTACACGCTTTAATTAAACTCCCTATTAAATGTGGTAC
TGACGATGTGGGTAAGGATAGCCGCTTATTGATAGCTGTCAAGTGTCCTTCTGAACGTACTGAGGACAGTCAAAGCAGTAATGATGATTGCAATTGGAAGAGACCCAAGA
AGCTCAACAAACAGTCAATTGATGATGAAGAGTCTCCTATTAAGTCCTCTTTAGGTGATCATGACCTGCACATCGAACGAACCTTAAAGTCGATGGCAAATCTAGAAGAC
TATAACGTTGTACTTACTTATAGTGAGAACTCTAAGACACCTATATGTGCAACTATTGGGTCTGCTAGTCCTCTTGTGATCAAGGGGTCCCCTCAACAAGTGGAAGGAAC
AAAGCTTATTGCAGCTTCTAAGATTTCTCATTTTTGTGCCGACAACTTAATTTCTGACCTCCGACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACTGAGGAACGACTTATGGAGAAAATTGAGGGAGGGACAAAATGATTGGTGGATAATTCATCTCCTTCTACACGCTTTAATTAAACTCCCTATTAAATGTGGTAC
TGACGATGTGGGTAAGGATAGCCGCTTATTGATAGCTGTCAAGTGTCCTTCTGAACGTACTGAGGACAGTCAAAGCAGTAATGATGATTGCAATTGGAAGAGACCCAAGA
AGCTCAACAAACAGTCAATTGATGATGAAGAGTCTCCTATTAAGTCCTCTTTAGGTGATCATGACCTGCACATCGAACGAACCTTAAAGTCGATGGCAAATCTAGAAGAC
TATAACGTTGTACTTACTTATAGTGAGAACTCTAAGACACCTATATGTGCAACTATTGGGTCTGCTAGTCCTCTTGTGATCAAGGGGTCCCCTCAACAAGTGGAAGGAAC
AAAGCTTATTGCAGCTTCTAAGATTTCTCATTTTTGTGCCGACAACTTAATTTCTGACCTCCGACGATAG
Protein sequenceShow/hide protein sequence
MKLRNDLWRKLREGQNDWWIIHLLLHALIKLPIKCGTDDVGKDSRLLIAVKCPSERTEDSQSSNDDCNWKRPKKLNKQSIDDEESPIKSSLGDHDLHIERTLKSMANLED
YNVVLTYSENSKTPICATIGSASPLVIKGSPQQVEGTKLIAASKISHFCADNLISDLRR