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CSPI07G09400 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G09400
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr7:7415624..7416166
RNA-Seq ExpressionCSPI07G09400
SyntenyCSPI07G09400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050409.1 hypothetical protein E6C27_scaffold1166G00260 [Cucumis melo var. makuwa]6.3e-4476.15Show/hide
Query:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAVLKS----KGNKMKCGSNKQNNPLSRSMANLV
        M LD+QFQV +IIDKL  LWK+FKN LR KTKEFSLE+L TRLRI EEA+KHD+KEEVNAIP+KK  AVLKS    KGNKMK G NKQNNP S SMANL+
Subjt:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAVLKS----KGNKMKCGSNKQNNPLSRSMANLV

Query:  EDEFVAMIFEVNVIRGSEGWWLDIGASRHV
        E+E VAMI EVNVI GSEGWWLD GASRHV
Subjt:  EDEFVAMIFEVNVIRGSEGWWLDIGASRHV

KAA0055815.1 putative Polyprotein [Cucumis melo var. makuwa]2.0e-4266.24Show/hide
Query:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAV----LKSKGNKMKCGSNKQNNPLSRS-----
        M LD+QFQVAVIIDKLPPLWK+FKN LR KTKEFSLESLITRLRI EEARKHD+KEE N IP+KK  AV    LK KGNKMK G NKQNNP SRS     
Subjt:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAV----LKSKGNKMKCGSNKQNNPLSRS-----

Query:  ----------------------MANLVEDEFVAMIFEVNVIRGSEGWWLDIGASRHV
                               ANL+EDE VAMIFEVNVI  SEGWWLD GASRHV
Subjt:  ----------------------MANLVEDEFVAMIFEVNVIRGSEGWWLDIGASRHV

KAA0058199.1 putative Polyprotein [Cucumis melo var. makuwa]5.0e-4164.97Show/hide
Query:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAV----LKSKGNKMKCGSNKQNNPLSRSM----
        M LD+QFQVAVIIDKLPPLWK+FKN LR KTKEFSLESLITRLRI EEARKHD+KEEVNAI +KK  AV    LK KGN+MK  SNKQNNP S+SM    
Subjt:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAV----LKSKGNKMKCGSNKQNNPLSRSM----

Query:  -----------------------ANLVEDEFVAMIFEVNVIRGSEGWWLDIGASRHV
                               ANL+EDE VAMI EVNVI G +GWWLD GASRHV
Subjt:  -----------------------ANLVEDEFVAMIFEVNVIRGSEGWWLDIGASRHV

KAA0067915.1 putative Polyprotein [Cucumis melo var. makuwa]1.0e-4164.97Show/hide
Query:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAVLKS----KGNKMKCGSNKQNNPLSRS-----
        M LD+QFQVAVIIDKLPPLWK+FKN LR KTKEF LESLITRL I EE RKHD+KEEVNAIPKKK   VLKS    KGNKMK GSNKQNNP S+S     
Subjt:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAVLKS----KGNKMKCGSNKQNNPLSRS-----

Query:  ----------------------MANLVEDEFVAMIFEVNVIRGSEGWWLDIGASRHV
                               ANL+E+E VAMIFEVNVI GSEGWWLD GA  HV
Subjt:  ----------------------MANLVEDEFVAMIFEVNVIRGSEGWWLDIGASRHV

TYJ98000.1 hypothetical protein E5676_scaffold487G00230 [Cucumis melo var. makuwa]3.1e-4374.62Show/hide
Query:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAVLKS----KGNKMKCGSNKQNNPLSRSMANLV
        M LD+QFQV +IIDKLP LWK+FKN LR KTKEFSLE+LITRL+I EEA+K D+K+EVNAIP+KK  AVLKS    KGNKMK G NKQNNP S SMANL+
Subjt:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAVLKS----KGNKMKCGSNKQNNPLSRSMANLV

Query:  EDEFVAMIFEVNVIRGSEGWWLDIGASRHV
        E+E VAMI EVNVI GSEGWWLD  ASRHV
Subjt:  EDEFVAMIFEVNVIRGSEGWWLDIGASRHV

TrEMBL top hitse value%identityAlignment
A0A5A7UA92 Uncharacterized protein3.0e-4476.15Show/hide
Query:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAVLKS----KGNKMKCGSNKQNNPLSRSMANLV
        M LD+QFQV +IIDKL  LWK+FKN LR KTKEFSLE+L TRLRI EEA+KHD+KEEVNAIP+KK  AVLKS    KGNKMK G NKQNNP S SMANL+
Subjt:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAVLKS----KGNKMKCGSNKQNNPLSRSMANLV

Query:  EDEFVAMIFEVNVIRGSEGWWLDIGASRHV
        E+E VAMI EVNVI GSEGWWLD GASRHV
Subjt:  EDEFVAMIFEVNVIRGSEGWWLDIGASRHV

A0A5A7UQC7 Putative Polyprotein9.8e-4366.24Show/hide
Query:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAV----LKSKGNKMKCGSNKQNNPLSRS-----
        M LD+QFQVAVIIDKLPPLWK+FKN LR KTKEFSLESLITRLRI EEARKHD+KEE N IP+KK  AV    LK KGNKMK G NKQNNP SRS     
Subjt:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAV----LKSKGNKMKCGSNKQNNPLSRS-----

Query:  ----------------------MANLVEDEFVAMIFEVNVIRGSEGWWLDIGASRHV
                               ANL+EDE VAMIFEVNVI  SEGWWLD GASRHV
Subjt:  ----------------------MANLVEDEFVAMIFEVNVIRGSEGWWLDIGASRHV

A0A5A7UXE9 Putative Polyprotein2.4e-4164.97Show/hide
Query:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAV----LKSKGNKMKCGSNKQNNPLSRSM----
        M LD+QFQVAVIIDKLPPLWK+FKN LR KTKEFSLESLITRLRI EEARKHD+KEEVNAI +KK  AV    LK KGN+MK  SNKQNNP S+SM    
Subjt:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAV----LKSKGNKMKCGSNKQNNPLSRSM----

Query:  -----------------------ANLVEDEFVAMIFEVNVIRGSEGWWLDIGASRHV
                               ANL+EDE VAMI EVNVI G +GWWLD GASRHV
Subjt:  -----------------------ANLVEDEFVAMIFEVNVIRGSEGWWLDIGASRHV

A0A5A7VQD4 Putative Polyprotein4.8e-4264.97Show/hide
Query:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAVLKS----KGNKMKCGSNKQNNPLSRS-----
        M LD+QFQVAVIIDKLPPLWK+FKN LR KTKEF LESLITRL I EE RKHD+KEEVNAIPKKK   VLKS    KGNKMK GSNKQNNP S+S     
Subjt:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAVLKS----KGNKMKCGSNKQNNPLSRS-----

Query:  ----------------------MANLVEDEFVAMIFEVNVIRGSEGWWLDIGASRHV
                               ANL+E+E VAMIFEVNVI GSEGWWLD GA  HV
Subjt:  ----------------------MANLVEDEFVAMIFEVNVIRGSEGWWLDIGASRHV

A0A5D3BDS3 Uncharacterized protein1.5e-4374.62Show/hide
Query:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAVLKS----KGNKMKCGSNKQNNPLSRSMANLV
        M LD+QFQV +IIDKLP LWK+FKN LR KTKEFSLE+LITRL+I EEA+K D+K+EVNAIP+KK  AVLKS    KGNKMK G NKQNNP S SMANL+
Subjt:  MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAVLKS----KGNKMKCGSNKQNNPLSRSMANLV

Query:  EDEFVAMIFEVNVIRGSEGWWLDIGASRHV
        E+E VAMI EVNVI GSEGWWLD  ASRHV
Subjt:  EDEFVAMIFEVNVIRGSEGWWLDIGASRHV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCTAGACGAACAATTTCAAGTTGCAGTTATTATTGATAAATTACCTCCCCTGTGGAAAGAATTCAAGAACGCTCTAAGGCGCAAAACCAAGGAGTTCTCGTTGGA
AAGCCTTATCACGAGACTAAGGATAGGGGAGGAGGCAAGAAAACATGATCAAAAGGAGGAGGTAAATGCGATTCCCAAAAAGAAGTCTATTGCAGTTCTGAAATCGAAAG
GAAACAAGATGAAATGTGGATCCAATAAACAGAACAACCCTCTATCTAGAAGTATGGCAAACCTGGTAGAAGATGAATTTGTAGCTATGATTTTTGAAGTTAATGTCATT
AGGGGGTCTGAAGGTTGGTGGCTAGACATTGGTGCATCCCGCCATGTTGTCATGACCTTAGTCTGTTCAGAAAATATAATGAAGTTAAGAATAAGAATATCCTTCTGGGA
GATTATCATACAACCAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGACGCTAGACGAACAATTTCAAGTTGCAGTTATTATTGATAAATTACCTCCCCTGTGGAAAGAATTCAAGAACGCTCTAAGGCGCAAAACCAAGGAGTTCTCGTTGGA
AAGCCTTATCACGAGACTAAGGATAGGGGAGGAGGCAAGAAAACATGATCAAAAGGAGGAGGTAAATGCGATTCCCAAAAAGAAGTCTATTGCAGTTCTGAAATCGAAAG
GAAACAAGATGAAATGTGGATCCAATAAACAGAACAACCCTCTATCTAGAAGTATGGCAAACCTGGTAGAAGATGAATTTGTAGCTATGATTTTTGAAGTTAATGTCATT
AGGGGGTCTGAAGGTTGGTGGCTAGACATTGGTGCATCCCGCCATGTTGTCATGACCTTAGTCTGTTCAGAAAATATAATGAAGTTAAGAATAAGAATATCCTTCTGGGA
GATTATCATACAACCAAGATAG
Protein sequenceShow/hide protein sequence
MTLDEQFQVAVIIDKLPPLWKEFKNALRRKTKEFSLESLITRLRIGEEARKHDQKEEVNAIPKKKSIAVLKSKGNKMKCGSNKQNNPLSRSMANLVEDEFVAMIFEVNVI
RGSEGWWLDIGASRHVVMTLVCSENIMKLRIRISFWEIIIQPR