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CSPI07G10100 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G10100
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGlutamate-gated kainate-type ion channel receptor subunit GluR5
Genome locationChr7:8175322..8175555
RNA-Seq ExpressionCSPI07G10100
SyntenyCSPI07G10100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC32449.1 hypothetical protein L484_012616 [Morus notabilis]5.1e-1061.76Show/hide
Query:  LFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVA-PSSSKPMKVNGNLPAKDGNV
        LFLTL+ AL  +S +A+R+P   WEQMLPKKLPSP+S+PSKGTN+V+  SSSK + V+ NLP+ DG V
Subjt:  LFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVA-PSSSKPMKVNGNLPAKDGNV

KAE8646070.1 hypothetical protein Csa_015561 [Cucumis sativus]1.1e-31100Show/hide
Query:  MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV
        MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV
Subjt:  MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV

KAF9855135.1 hypothetical protein H0E87_006638 [Populus deltoides]1.1e-0953.25Show/hide
Query:  MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV
        ML+S+  + +LF   +LA   +S+DA+R+P  YWEQMLPKKLP+PSS+PSKGTN+V+ S S  +K + NL + DG V
Subjt:  MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV

KAG6607702.1 hypothetical protein SDJN03_01044, partial [Cucurbita argyrosperma subsp. sororia]8.7e-1875.34Show/hide
Query:  MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAK
        M LSF  RFI  L LVLAL S+S++AARVPT YWEQMLPKKLP+PSSAPSKGTN+VA SS K +KV+GNLPAK
Subjt:  MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAK

TYK23265.1 glutamate-gated kainate-type ion channel receptor subunit GluR5 [Cucumis melo var. makuwa]9.0e-3196.1Show/hide
Query:  MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV
        MLL+FNFRFILFLTL+LALTSIS+DAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV
Subjt:  MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV

TrEMBL top hitse value%identityAlignment
A0A5D3DI56 Glutamate-gated kainate-type ion channel receptor subunit GluR54.3e-3196.1Show/hide
Query:  MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV
        MLL+FNFRFILFLTL+LALTSIS+DAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV
Subjt:  MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV

A0A7J6GWN4 Uncharacterized protein1.6e-0953.33Show/hide
Query:  MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDG
        ML S+  ++ LF  L++A   +S +A+R+P  Y++QM+PKKLPSPSS+PSKGTN+V  SSSK +K + NLP+ DG
Subjt:  MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDG

A0A7N2MJW9 Uncharacterized protein1.5e-1054.55Show/hide
Query:  MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV
        ML S+  + +LF  L   + S   +A+R+P  YWEQMLPKKLP PSS+PSKGTN+++ SSSK +K N NLP+ DG V
Subjt:  MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV

A0A803PR73 Uncharacterized protein4.2e-1053.25Show/hide
Query:  MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV
        ML S+  ++ LF  L++A   +S +A+R+P  Y++QM+PKKLPSPSS+PSKGTN+V  SSSK +K + NLP+ DG V
Subjt:  MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV

W9S9P5 Uncharacterized protein2.5e-1061.76Show/hide
Query:  LFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVA-PSSSKPMKVNGNLPAKDGNV
        LFLTL+ AL  +S +A+R+P   WEQMLPKKLPSP+S+PSKGTN+V+  SSSK + V+ NLP+ DG V
Subjt:  LFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVA-PSSSKPMKVNGNLPAKDGNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACTTTCTTTCAACTTTAGATTCATTCTCTTCTTAACACTTGTTCTCGCTCTCACCTCCATTTCCACAGACGCTGCGAGAGTTCCAACACCGTATTGGGAGCAGAT
GTTGCCTAAGAAGTTACCCTCTCCATCGTCTGCGCCGTCCAAAGGGACAAACACCGTCGCTCCGTCTTCTTCTAAACCTATGAAAGTTAACGGGAATCTGCCAGCAAAGG
ACGGTAACGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTACTTTCTTTCAACTTTAGATTCATTCTCTTCTTAACACTTGTTCTCGCTCTCACCTCCATTTCCACAGACGCTGCGAGAGTTCCAACACCGTATTGGGAGCAGAT
GTTGCCTAAGAAGTTACCCTCTCCATCGTCTGCGCCGTCCAAAGGGACAAACACCGTCGCTCCGTCTTCTTCTAAACCTATGAAAGTTAACGGGAATCTGCCAGCAAAGG
ACGGTAACGTTTAG
Protein sequenceShow/hide protein sequence
MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV