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CSPI07G10320 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G10320
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr7:8426324..8426811
RNA-Seq ExpressionCSPI07G10320
SyntenyCSPI07G10320
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031676.1 uncharacterized protein E6C27_scaffold139G004600 [Cucumis melo var. makuwa]3.6e-1181.82Show/hide
Query:  LKEKGKNVEVNFSYQDDVYDPSNMTHLDVANFFESPEEKTDDNE
        ++EKGKNVEVNF+YQDDV+DPSNMTHLDVA+FFESPE+K D NE
Subjt:  LKEKGKNVEVNFSYQDDVYDPSNMTHLDVANFFESPEEKTDDNE

KAA0032304.1 Gag [Cucumis melo var. makuwa]8.9e-1883.05Show/hide
Query:  HLVDLYQASLKEKGKNVEVNFSYQDDVYDPSNMTHLDVANFFESPEEKTDDNEEVANTS
        HLV LYQASL+EKGKNVEVNF+YQDDV+DPSNMTHLDVA+FFESPEEK D NE VAN +
Subjt:  HLVDLYQASLKEKGKNVEVNFSYQDDVYDPSNMTHLDVANFFESPEEKTDDNEEVANTS

XP_022152405.1 uncharacterized protein LOC111020141 [Momordica charantia]3.4e-0953.52Show/hide
Query:  HLVDLYQASLKEKGKNVEVNFSYQD-DVYDPSNMTHLDVANFFESPEEK---TDDNEEVANTSFNYDNVQN
        HLVDLYQASLKEKG NVE N +Y D D++D +N+T LDV +F ESP E+       + +A+ SF++ N+QN
Subjt:  HLVDLYQASLKEKGKNVEVNFSYQD-DVYDPSNMTHLDVANFFESPEEK---TDDNEEVANTSFNYDNVQN

XP_027093777.1 uncharacterized protein LOC113714182 [Coffea arabica]6.4e-0867.35Show/hide
Query:  HLVDLYQASLKEKGKNVEVNFSYQDDVY--DPSNMTHLDVANFFESPEE
        HLVDLYQASLK+K K+VE NF YQ D Y  D ++MTHLD+A+FFE PE+
Subjt:  HLVDLYQASLKEKGKNVEVNFSYQDDVY--DPSNMTHLDVANFFESPEE

XP_027102679.1 uncharacterized protein LOC113723918 [Coffea arabica]6.4e-0867.35Show/hide
Query:  HLVDLYQASLKEKGKNVEVNFSYQDDVY--DPSNMTHLDVANFFESPEE
        HLVDLYQASLK+K K+VE NF YQ D Y  D ++MTHLD+A+FFE PE+
Subjt:  HLVDLYQASLKEKGKNVEVNFSYQDDVY--DPSNMTHLDVANFFESPEE

TrEMBL top hitse value%identityAlignment
A0A5A7SNT4 Uncharacterized protein1.7e-1181.82Show/hide
Query:  LKEKGKNVEVNFSYQDDVYDPSNMTHLDVANFFESPEEKTDDNE
        ++EKGKNVEVNF+YQDDV+DPSNMTHLDVA+FFESPE+K D NE
Subjt:  LKEKGKNVEVNFSYQDDVYDPSNMTHLDVANFFESPEEKTDDNE

A0A5D3BHZ8 Gag4.3e-1883.05Show/hide
Query:  HLVDLYQASLKEKGKNVEVNFSYQDDVYDPSNMTHLDVANFFESPEEKTDDNEEVANTS
        HLV LYQASL+EKGKNVEVNF+YQDDV+DPSNMTHLDVA+FFESPEEK D NE VAN +
Subjt:  HLVDLYQASLKEKGKNVEVNFSYQDDVYDPSNMTHLDVANFFESPEEKTDDNEEVANTS

A0A6J1DDU8 uncharacterized protein LOC1110201411.6e-0953.52Show/hide
Query:  HLVDLYQASLKEKGKNVEVNFSYQD-DVYDPSNMTHLDVANFFESPEEK---TDDNEEVANTSFNYDNVQN
        HLVDLYQASLKEKG NVE N +Y D D++D +N+T LDV +F ESP E+       + +A+ SF++ N+QN
Subjt:  HLVDLYQASLKEKGKNVEVNFSYQD-DVYDPSNMTHLDVANFFESPEEK---TDDNEEVANTSFNYDNVQN

A0A6P6UVW2 uncharacterized protein LOC1137141823.1e-0867.35Show/hide
Query:  HLVDLYQASLKEKGKNVEVNFSYQDDVY--DPSNMTHLDVANFFESPEE
        HLVDLYQASLK+K K+VE NF YQ D Y  D ++MTHLD+A+FFE PE+
Subjt:  HLVDLYQASLKEKGKNVEVNFSYQDDVY--DPSNMTHLDVANFFESPEE

A0A6P6VI03 uncharacterized protein LOC1137239183.1e-0867.35Show/hide
Query:  HLVDLYQASLKEKGKNVEVNFSYQDDVY--DPSNMTHLDVANFFESPEE
        HLVDLYQASLK+K K+VE NF YQ D Y  D ++MTHLD+A+FFE PE+
Subjt:  HLVDLYQASLKEKGKNVEVNFSYQDDVY--DPSNMTHLDVANFFESPEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTCGACCAACTGGAACAACACCATTCCCTGAAGCGTATGCTGTATTTTGAAACAATAATGGTCGAGGTCGAGGTCGTGGTCGTGGTCGAGGTCGTGACCGTGCA
CTTAGTCGACCTCTATCAAGCCTCATTGAAGGAAAAAGGGAAGAATGTGGAAGTAAACTTTTCCTATCAAGATGATGTCTATGACCCTTCGAATATGACACATTTGGATG
TTGCTAATTTTTTTGAGTCTCCCGAAGAGAAAACTGATGATAATGAAGAAGTAGCAAATACATCCTTTAATTATGATAATGTCCAAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCTCGACCAACTGGAACAACACCATTCCCTGAAGCGTATGCTGTATTTTGAAACAATAATGGTCGAGGTCGAGGTCGTGGTCGTGGTCGAGGTCGTGACCGTGCA
CTTAGTCGACCTCTATCAAGCCTCATTGAAGGAAAAAGGGAAGAATGTGGAAGTAAACTTTTCCTATCAAGATGATGTCTATGACCCTTCGAATATGACACATTTGGATG
TTGCTAATTTTTTTGAGTCTCCCGAAGAGAAAACTGATGATAATGAAGAAGTAGCAAATACATCCTTTAATTATGATAATGTCCAAAACTGA
Protein sequenceShow/hide protein sequence
MTLDQLEQHHSLKRMLYFETIMVEVEVVVVVEVVTVHLVDLYQASLKEKGKNVEVNFSYQDDVYDPSNMTHLDVANFFESPEEKTDDNEEVANTSFNYDNVQN