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CSPI07G10470 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G10470
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationChr7:8565416..8565637
RNA-Seq ExpressionCSPI07G10470
SyntenyCSPI07G10470
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025506.1 transcription initiation factor TFIID subunit 2-like [Cucumis melo var. makuwa]7.2e-2277.03Show/hide
Query:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE
        MAV RYDIEKFDGKG FTLWKAK+KAIV ++K L+A+   EKLP+ MTQE+KET+ENAAYG IVLNLSDNVLRE
Subjt:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE

XP_016899859.1 PREDICTED: uncharacterized protein LOC107990692 [Cucumis melo]1.1e-2279.73Show/hide
Query:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE
        +AVARYDIEKFDGKGDFTLWKAKIKAIV ++KAL+ALT  EKLP+ M QED ET+ENAAY  IVLNLSD+VLRE
Subjt:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE

XP_038889301.1 uncharacterized protein LOC120079211 [Benincasa hispida]1.9e-1458.11Show/hide
Query:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE
        MA  RY+IEKFDGK +F LWKAKIK ++ ++KAL A+T   K PET+T  +K+T+E  AYG IVLN+ D+VLR+
Subjt:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE

XP_038889933.1 uncharacterized protein LOC120079695 [Benincasa hispida]3.8e-1559.46Show/hide
Query:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE
        M   R++IEKFDGK DF LWKAKIKA++ ++KAL A+T L K P+T T  +KE +E  AYG IVLN++DNVLR+
Subjt:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE

XP_038890043.1 uncharacterized protein LOC120079747 [Benincasa hispida]2.5e-1458.11Show/hide
Query:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE
        MA  RY+IEKFD K DF LWK KIK ++ ++KAL A+T   K PET+T+ +KET+E  A G IVLN++DNVLR+
Subjt:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE

TrEMBL top hitse value%identityAlignment
A0A1S4DV47 uncharacterized protein LOC1079906925.4e-2379.73Show/hide
Query:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE
        +AVARYDIEKFDGKGDFTLWKAKIKAIV ++KAL+ALT  EKLP+ M QED ET+ENAAY  IVLNLSD+VLRE
Subjt:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE

A0A5A7TKQ1 Retrovirus-related Pol polyprotein from transposon TNT 1-943.0e-1350Show/hide
Query:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE
        M   +++IEKFDG GD TLW  +I  I+  +KAL+AL   ++LP T+T+ ++ET+EN AYG +V+N++DNVLR+
Subjt:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE

A0A5A7U6R2 Retrovirus-related Pol polyprotein from transposon TNT 1-943.0e-1348.65Show/hide
Query:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE
        M   +++IEKFDG GDFTLW  +I AI+  +KAL+AL   ++LP T+T+ ++ET+E  AY  +++N++DNVLR+
Subjt:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE

A0A5D3BQH4 Transcription initiation factor TFIID subunit 2-like3.5e-2277.03Show/hide
Query:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE
        MAV RYDIEKFDGKG FTLWKAK+KAIV ++K L+A+   EKLP+ MTQE+KET+ENAAYG IVLNLSDNVLRE
Subjt:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE

A0A5D3CRK9 Putative polyprotein3.0e-1350Show/hide
Query:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE
        M   +++IEKFDG GD TLW  +I  I+  +KAL+AL   ++LP T+T+ ++ET+EN AYG +V+N++DNVLR+
Subjt:  MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTAGCAAGGTATGATATTGAGAAGTTTGATGGTAAGGGAGATTTTACCTTATGGAAAGCTAAGATCAAAGCAATAGTCGACAAGAAAAAGGCATTGGAAGCCCT
CACATATTTAGAAAAGCTACCTGAAACAATGACTCAAGAAGACAAAGAAACTGTGGAGAATGCAGCCTATGGTGTCATAGTTTTAAACCTAAGTGACAATGTTCTTAGGG
AG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTAGCAAGGTATGATATTGAGAAGTTTGATGGTAAGGGAGATTTTACCTTATGGAAAGCTAAGATCAAAGCAATAGTCGACAAGAAAAAGGCATTGGAAGCCCT
CACATATTTAGAAAAGCTACCTGAAACAATGACTCAAGAAGACAAAGAAACTGTGGAGAATGCAGCCTATGGTGTCATAGTTTTAAACCTAAGTGACAATGTTCTTAGGG
AG
Protein sequenceShow/hide protein sequence
MAVARYDIEKFDGKGDFTLWKAKIKAIVDKKKALEALTYLEKLPETMTQEDKETVENAAYGVIVLNLSDNVLRE