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CSPI07G11410 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G11410
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionIntegrase
Genome locationChr7:9623629..9624174
RNA-Seq ExpressionCSPI07G11410
SyntenyCSPI07G11410
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035840.1 integrase [Cucumis melo var. makuwa]7.0e-2467.44Show/hide
Query:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKL
        MKVLYGSQ+LWDIV+ GY+E E+++ L+ QQL ELR+ RKKDKKALFFIYQ+VDE IFERIS  ++AKAAWD L++ Y+GE+K K+
Subjt:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKL
KAA0060377.1 integrase [Cucumis melo var. makuwa]1.6e-2358.1Show/hide
Query:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKLFICSPPIEVDPMEE
        MKVLYGSQ+LWDIV+ GY+E E+++ L+ QQL ELR+ RKKDKKALFFIYQ+VDE IFERIS  ++AKAAWD L++ Y+GE+K K+      I +  +  
Subjt:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKLFICSPPIEVDPMEE

Query:  EVDVV
        E D +
Subjt:  EVDVV
KAA0065484.1 integrase [Cucumis melo var. makuwa]9.2e-2457.8Show/hide
Query:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKL---------FICSP
        MKVLYGSQ+LWDIV+ GY+E E+++ L+ QQL ELR+ RKKDKKALFFIYQ+VDE IFERIS  ++AKAAWD L++ Y+GE+K K+         F C  
Subjt:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKL---------FICSP

Query:  PIEVDPMEE
          E + +EE
Subjt:  PIEVDPMEE
TYJ95504.1 integrase [Cucumis melo var. makuwa]1.6e-2358.1Show/hide
Query:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKLFICSPPIEVDPMEE
        MKVLYGSQ+LWDIV+ GY+E E+++ L+ QQL ELR+ RKKDKKALFFIYQ+VDE IFERIS  ++AKAAWD L++ Y+GE+K K+      I +  +  
Subjt:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKLFICSPPIEVDPMEE

Query:  EVDVV
        E D +
Subjt:  EVDVV
XP_016903256.1 PREDICTED: uncharacterized protein LOC107992100 [Cucumis melo]9.2e-2467.44Show/hide
Query:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKL
        MKVLYGSQ+LWDIV+ GY+E E+++ L+ QQL ELR+ RKKDKKALFFIYQ+VDE IFERIS  ++AKAAWD L++ Y+GE+K K+
Subjt:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKL
TrEMBL top hitse value%identityAlignment
A0A1S4E4V0 uncharacterized protein LOC1079921004.4e-2467.44Show/hide
Query:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKL
        MKVLYGSQ+LWDIV+ GY+E E+++ L+ QQL ELR+ RKKDKKALFFIYQ+VDE IFERIS  ++AKAAWD L++ Y+GE+K K+
Subjt:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKL
A0A5A7SXS2 Integrase3.4e-2467.44Show/hide
Query:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKL
        MKVLYGSQ+LWDIV+ GY+E E+++ L+ QQL ELR+ RKKDKKALFFIYQ+VDE IFERIS  ++AKAAWD L++ Y+GE+K K+
Subjt:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKL
A0A5A7VDX5 Integrase4.4e-2457.8Show/hide
Query:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKL---------FICSP
        MKVLYGSQ+LWDIV+ GY+E E+++ L+ QQL ELR+ RKKDKKALFFIYQ+VDE IFERIS  ++AKAAWD L++ Y+GE+K K+         F C  
Subjt:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKL---------FICSP

Query:  PIEVDPMEE
          E + +EE
Subjt:  PIEVDPMEE
A0A5D3BQ81 Integrase7.6e-2458.1Show/hide
Query:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKLFICSPPIEVDPMEE
        MKVLYGSQ+LWDIV+ GY+E E+++ L+ QQL ELR+ RKKDKKALFFIYQ+VDE IFERIS  ++AKAAWD L++ Y+GE+K K+      I +  +  
Subjt:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKLFICSPPIEVDPMEE

Query:  EVDVV
        E D +
Subjt:  EVDVV
A0A5D3CLV1 Integrase7.6e-2458.1Show/hide
Query:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKLFICSPPIEVDPMEE
        MKVLYGSQ+LWDIV+ GY+E E+++ L+ QQL ELR+ RKKDKKALFFIYQ+VDE IFERIS  ++AKAAWD L++ Y+GE+K K+      I +  +  
Subjt:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKLFICSPPIEVDPMEE

Query:  EVDVV
        E D +
Subjt:  EVDVV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48720.1 unknown protein2.4e-1450Show/hide
Query:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAK
        MK + G+ D+W+IV+ G+ EPE+E  LS  Q + LRD+RK+DKKAL  IYQ +DE+ FE++   ++AK
Subjt:  MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAK
AT3G21000.1 Gag-Pol-related retrotransposon family protein3.5e-0532.88Show/hide
Query:  QDLWDIVDIGYSEPESEN-----GLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQ
        Q LWD+V  G  +  S+N      +  ++L++ RD   KD KAL  +  S+ +++F +    S+AK  WD L+
Subjt:  QDLWDIVDIGYSEPESEN-----GLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTTCTTTATGGATCTCAAGATCTTTGGGATATTGTTGACATCGGATATTCAGAGCCAGAAAGTGAGAATGGTCTTTCAGCACAACAACTCAATGAGTTGAGAGA
TGCTAGAAAAAAGGATAAGAAGGCATTATTTTTCATCTACCAATCTGTGGATGAAAATATTTTTGAAAGAATATCAGGAGTCTCTACTGCTAAAGCAGCATGGGATGCAT
TGCAAAATTTGTATGAAGGAGAAGAAAAGAAGAAGCTTTTCATATGCAGTCCTCCTATAGAGGTCGATCCAATGGAAGAAGAGGTGGACGTGGTGGTAGAGGCAATGGAC
GATCCAACGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTTCTTTATGGATCTCAAGATCTTTGGGATATTGTTGACATCGGATATTCAGAGCCAGAAAGTGAGAATGGTCTTTCAGCACAACAACTCAATGAGTTGAGAGA
TGCTAGAAAAAAGGATAAGAAGGCATTATTTTTCATCTACCAATCTGTGGATGAAAATATTTTTGAAAGAATATCAGGAGTCTCTACTGCTAAAGCAGCATGGGATGCAT
TGCAAAATTTGTATGAAGGAGAAGAAAAGAAGAAGCTTTTCATATGCAGTCCTCCTATAGAGGTCGATCCAATGGAAGAAGAGGTGGACGTGGTGGTAGAGGCAATGGAC
GATCCAACGTTGTAA
Protein sequenceShow/hide protein sequence
MKVLYGSQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKKKLFICSPPIEVDPMEEEVDVVVEAMD
DPTL