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CSPI07G11620 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI07G11620
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like
Genome locationChr7:9866558..9868626
RNA-Seq ExpressionCSPI07G11620
SyntenyCSPI07G11620
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008447032.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like [Cucumis melo]4.3e-3291.4Show/hide
Query:  MASVSRSLLT-AAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MASVSRSLLT AAASRSM GRT+ LAHKTLNPL V SSSSR+FPS TRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
Subjt:  MASVSRSLLT-AAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

XP_011659076.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucumis sativus]2.1e-39100Show/hide
Query:  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
Subjt:  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

XP_022136047.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Momordica charantia]2.0e-2981.52Show/hide
Query:  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MA+V RSLLTAA SRS+ GRT++L  KTLNP+PVSSSSSR  PS +RIVSSLA VESLMPLH+AVASARLKSKIAVDSHCWSWLSEGFAT L
Subjt:  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

XP_023531748.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]4.6e-2677.17Show/hide
Query:  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MASV RS+LTA  SRSM GRT++L  KTLNP+P  SSSS+   S +RIVSSLA VESLMPLH+AVASARLKSKIAVDSHCWSWLSEGFAT L
Subjt:  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

XP_038887804.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial [Benincasa hispida]1.7e-2883.7Show/hide
Query:  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MASV RSLLTAAASRSM GRT++LAHKTLNPL V SSSSR F S +RIVSSLA VESLMPLH+AVASARLKSKIAVDSHCW WLSEGF T L
Subjt:  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

TrEMBL top hitse value%identityAlignment
A0A0A0K7P3 Uncharacterized protein1.0e-39100Show/hide
Query:  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
Subjt:  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

A0A1S3BGG1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like2.1e-3291.4Show/hide
Query:  MASVSRSLLT-AAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MASVSRSLLT AAASRSM GRT+ LAHKTLNPL V SSSSR+FPS TRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
Subjt:  MASVSRSLLT-AAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

A0A5D3BYV0 Protein NUCLEAR FUSION DEFECTIVE 62.1e-3291.4Show/hide
Query:  MASVSRSLLT-AAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MASVSRSLLT AAASRSM GRT+ LAHKTLNPL V SSSSR+FPS TRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
Subjt:  MASVSRSLLT-AAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

A0A6J1C4G8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial9.8e-3081.52Show/hide
Query:  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MA+V RSLLTAA SRS+ GRT++L  KTLNP+PVSSSSSR  PS +RIVSSLA VESLMPLH+AVASARLKSKIAVDSHCWSWLSEGFAT L
Subjt:  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

A0A6J1GKU0 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like6.5e-2676.84Show/hide
Query:  MASVSRSLLTAAA---SRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MAS+ RSLL AAA   SRSM GRT++LAH TL P+PV SSSSR F S +RI SSLA+V+SLMPLH+AVASARLKSKIAVDSHCWSWLSEGFAT L
Subjt:  MASVSRSLLTAAA---SRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial6.8e-0435.16Show/hide
Query:  SVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLAN-------VESLMPLHTAVASARLKSKIAVDSHCWSWLSE
        S +RS+L AA+SRS    T   A +  +  P+  +++R  P    ++S L N       VESL+P H+A ASA + SK+++    + WLS+
Subjt:  SVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLAN-------VESLMPLHTAVASARLKSKIAVDSHCWSWLSE

Arabidopsis top hitse value%identityAlignment
AT1G70350.1 unknown protein1.3e-0539.77Show/hide
Query:  TAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVE-----SLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        +AA S S  G++  +A         + SSS T PS  R+  S   VE     SL+PLH+  ASA L S +++ +  WS LSEGFA++L
Subjt:  TAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVE-----SLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

AT2G20585.1 nuclear fusion defective 64.8e-0535.16Show/hide
Query:  SVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLAN-------VESLMPLHTAVASARLKSKIAVDSHCWSWLSE
        S +RS+L AA+SRS    T   A +  +  P+  +++R  P    ++S L N       VESL+P H+A ASA + SK+++    + WLS+
Subjt:  SVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLAN-------VESLMPLHTAVASARLKSKIAVDSHCWSWLSE

AT2G20585.3 nuclear fusion defective 67.4e-0635.87Show/hide
Query:  SVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLAN-------VESLMPLHTAVASARLKSKIAVDSHCWSWLSEG
        S +RS+L AA+SRS    T   A +  +  P+  +++R  P    ++S L N       VESL+P H+A ASA + SK+++    + WLS+G
Subjt:  SVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLAN-------VESLMPLHTAVASARLKSKIAVDSHCWSWLSEG

AT4G39300.1 unknown protein1.8e-1548.45Show/hide
Query:  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSS-----SRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MAS  RS L  A SR++  R++++  K+LN  P ++SS     S++ P  +R++S+L +VE+++PLH+AVASARL+S IA DS CWS LS+G AT L
Subjt:  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSS-----SRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

AT4G39300.2 unknown protein2.8e-1347.25Show/hide
Query:  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSS-----SRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSE
        MAS  RS L  A SR++  R++++  K+LN  P ++SS     S++ P  +R++S+L +VE+++PLH+AVASARL+S IA DS CWS LS+
Subjt:  MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSS-----SRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGTTTCCCGATCGCTTCTTACGGCGGCGGCTTCCAGGTCCATGCCCGGCCGTACCAAATCACTTGCTCATAAAACCTTAAATCCATTGCCTGTTTCTTCTTC
TTCCTCCAGAACCTTTCCTTCCTTTACCAGGATTGTTTCGTCTTTGGCTAATGTGGAGTCTTTGATGCCACTCCACACCGCCGTCGCCTCGGCTCGGCTGAAGTCCAAAA
TTGCCGTCGATTCCCATTGCTGGAGCTGGCTTTCTGAAGGATTTGCAACATCTTTGTGA
mRNA sequenceShow/hide mRNA sequence
GACACACTAGTGTAAAAGGTTATTGCTTTAAAACCCTCACTTAAGAAAAAGAATACCCCAAAGAAACTTCTTCGCACTATAAAAATCCAATTGCTAAACCCGCTTCCACC
GGTGTGTCAAAGAAATGGCTTCCGTTTCCCGATCGCTTCTTACGGCGGCGGCTTCCAGGTCCATGCCCGGCCGTACCAAATCACTTGCTCATAAAACCTTAAATCCATTG
CCTGTTTCTTCTTCTTCCTCCAGAACCTTTCCTTCCTTTACCAGGATTGTTTCGTCTTTGGCTAATGTGGAGTCTTTGATGCCACTCCACACCGCCGTCGCCTCGGCTCG
GCTGAAGTCCAAAATTGCCGTCGATTCCCATTGCTGGAGCTGGCTTTCTGAAGGATTTGCAACATCTTTGTGACATAACATGGTTGGTGAAGGCGAAATTGTAATTGGTT
GATAATACAGCTGAATGACTGGTAGCTGAAACGACCTTCCATAGGACTTGTGAGGTTTTTCCATCTTTCCTACTTATCTTTGTAAGATACCTTTATCACAAGGAAGAATC
ATTTAGACAACTATTTTTTAGTTTTTATCGTTGTATAATGCAATGCGGCCACATTTTCTGGATATGCAGAGAGCTATTGTTTTAAGCCTTTGAACACAAACCTTGGGAGG
TTAGATTTTTGTTAGGCATCTCTCTTGCTCTTGGCTTGTTCAATAACATGCAATTGATTTCTTACATTCTCTAATTATGAGGTCTTGAGCTGG
Protein sequenceShow/hide protein sequence
MASVSRSLLTAAASRSMPGRTKSLAHKTLNPLPVSSSSSRTFPSFTRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL